NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK945945
Clone id YMU02A01NGRL0010_P17
Library
Length 566
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0010_P17. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GCTCTGTGTGTCGAAACACATTTCGATATGGCGGACGAAGACTTCAACGACTTTGATGGA
GGTGACGCCGGATACGATGAGGAGCCAGCTGAACCAGAAGTTGAAGAAGAGGTTGAGGAG
GATGCTGAACAAGCTGCACCCATTGACACACTTGGAGGTGAAGATGTGGAGATGAAGGAT
GGAGAAACTCCTACTGATAAACCTCGTAAAACAACACGGTATATGACAAAATATGAACGC
GCTCGGGTCTTGGGTACTAGAGCACTGCAAATAAGTATGAATGCACCTGTGATGGTTGAG
CTCGAAGGGGAGACAGATCCTCTTGAGATTGCAATGAAGGAGCTTAGAGCTCGGAAGATT
CCATTCACGATAAGACGCTACTTACCAGATGGAAGTTTTGAGGACTGGGGTGTGGACGAA
CTCATAGTAGAAGATTCATGGAAGCGACAAGTGGGTTAAGGAGATCTGGAATAATTTCTG
TAATGTCATTGGACATTCAGCATCCTTAACACAATCATCATGTGGCCAAATGCTGGACAG
TTGGTGCATTTTTCACCCTATCATCA
■■Homology search results ■■ -
sp_hit_id O88828
Definition sp|O88828|RPAB2_RAT DNA-directed RNA polymerases I, II, and III subunit RPABC2 OS=Rattus norvegicus
Align length 96
Score (bit) 138.0
E-value 2.0e-32
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945945|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0010_P17, 5'
         (566 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O88828|RPAB2_RAT DNA-directed RNA polymerases I, II, and III ...   138   2e-32
sp|P61219|RPAB2_MOUSE DNA-directed RNA polymerases I, II, and II...   138   2e-32
sp|Q5R592|RPAB2_PONAB DNA-directed RNA polymerases I, II, and II...   138   2e-32
sp|P61218|RPAB2_HUMAN DNA-directed RNA polymerases I, II, and II...   138   2e-32
sp|P61217|RPAB2_CRIGR DNA-directed RNA polymerases I, II, and II...   138   2e-32
sp|Q32PE0|RPAB2_BOVIN DNA-directed RNA polymerases I, II, and II...   135   1e-31
sp|P20435|RPAB2_YEAST DNA-directed RNA polymerases I, II, and II...   130   3e-30
sp|Q54FA8|RPAB2_DICDI DNA-directed RNA polymerases I, II, and II...   127   3e-29
sp|P36595|RPAB2_SCHPO DNA-directed RNA polymerases I, II, and II...   127   5e-29
sp|Q24320|RPAB2_DROME DNA-directed RNA polymerases I, II, and II...   126   9e-29
sp|Q17684|RPAB2_CAEEL Probable DNA-directed RNA polymerases I, I...   120   4e-27
sp|A8WSV7|RPAB2_CAEBR Probable DNA-directed RNA polymerases I, I...   119   1e-26
sp|Q8PW42|RPOK_METMA DNA-directed RNA polymerase subunit K OS=Me...    65   2e-10
sp|Q8TT40|RPOK_METAC DNA-directed RNA polymerase subunit K OS=Me...    64   7e-10
sp|A1RWX0|RPOK_THEPD DNA-directed RNA polymerase subunit K OS=Th...    62   3e-09
sp|Q9YDJ9|RPOK_AERPE DNA-directed RNA polymerase subunit K OS=Ae...    62   3e-09
sp|Q5UQ32|RPO6_MIMIV DNA-directed RNA polymerase subunit 6 OS=Ac...    61   4e-09
sp|O29134|RPOK_ARCFU DNA-directed RNA polymerase subunit K OS=Ar...    60   1e-08
sp|Q8ZTF9|RPOK_PYRAE DNA-directed RNA polymerase subunit K OS=Py...    59   2e-08
sp|O26148|RPOK_METTH DNA-directed RNA polymerase subunit K OS=Me...    58   3e-08
sp|Q6L1M4|RPOK_PICTO DNA-directed RNA polymerase subunit K OS=Pi...    57   8e-08
sp|Q97ZJ9|RPOK_SULSO DNA-directed RNA polymerase subunit K OS=Su...    56   1e-07
sp|Q9HQJ0|RPOK_HALSA DNA-directed RNA polymerase subunit K OS=Ha...    56   1e-07
sp|Q9HJ14|RPOK_THEAC DNA-directed RNA polymerase subunit K OS=Th...    54   7e-07
sp|P58232|RPOK_THEVO DNA-directed RNA polymerase subunit K OS=Th...    53   1e-06
sp|Q8U0E8|RPOK_PYRFU DNA-directed RNA polymerase subunit K OS=Py...    52   2e-06
sp|P62015|RPOK_PYRHO DNA-directed RNA polymerase subunit K OS=Py...    51   3e-06
sp|P62014|RPOK_PYRAB DNA-directed RNA polymerase subunit K OS=Py...    51   3e-06
sp|P29200|RPOK_HALMA DNA-directed RNA polymerase subunit K OS=Ha...    50   6e-06
sp|P39463|RPOK_SULAC DNA-directed RNA polymerase subunit K OS=Su...    50   8e-06

>sp|O88828|RPAB2_RAT DNA-directed RNA polymerases I, II, and III
           subunit RPABC2 OS=Rattus norvegicus GN=Polr2f PE=1 SV=1
          Length = 127

 Score =  138 bits (348), Expect = 2e-32
 Identities = 73/96 (76%), Positives = 81/96 (84%), Gaps = 2/96 (2%)
 Frame = +1

Query: 154 GGEDVE-MKDGETP-TDKPRKTTRYMTKYERARVLGTRALQISMNAPVMVELEGETDPLE 327
           G E+VE +  GE P  ++ R TT YMTKYERARVLGTRALQI+M APVMVELEGETDPL 
Sbjct: 32  GQENVEILPSGERPQANQKRITTPYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLL 91

Query: 328 IAMKELRARKIPFTIRRYLPDGSFEDWGVDELIVED 435
           IAMKEL+ARKIP  IRRYLPDGS+EDWGVDELI+ D
Sbjct: 92  IAMKELKARKIPIIIRRYLPDGSYEDWGVDELIISD 127


>sp|P61219|RPAB2_MOUSE DNA-directed RNA polymerases I, II, and III
           subunit RPABC2 OS=Mus musculus GN=Polr2f PE=2 SV=1
          Length = 127

 Score =  138 bits (348), Expect = 2e-32
 Identities = 73/96 (76%), Positives = 81/96 (84%), Gaps = 2/96 (2%)
 Frame = +1

Query: 154 GGEDVE-MKDGETP-TDKPRKTTRYMTKYERARVLGTRALQISMNAPVMVELEGETDPLE 327
           G E+VE +  GE P  ++ R TT YMTKYERARVLGTRALQI+M APVMVELEGETDPL 
Sbjct: 32  GQENVEILPSGERPQANQKRITTPYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLL 91

Query: 328 IAMKELRARKIPFTIRRYLPDGSFEDWGVDELIVED 435
           IAMKEL+ARKIP  IRRYLPDGS+EDWGVDELI+ D
Sbjct: 92  IAMKELKARKIPIIIRRYLPDGSYEDWGVDELIISD 127


>sp|Q5R592|RPAB2_PONAB DNA-directed RNA polymerases I, II, and III
           subunit RPABC2 OS=Pongo abelii GN=POLR2F PE=2 SV=1
          Length = 127

 Score =  138 bits (347), Expect = 2e-32
 Identities = 73/96 (76%), Positives = 81/96 (84%), Gaps = 2/96 (2%)
 Frame = +1

Query: 154 GGEDVE-MKDGETP-TDKPRKTTRYMTKYERARVLGTRALQISMNAPVMVELEGETDPLE 327
           G E+VE +  GE P  ++ R TT YMTKYERARVLGTRALQI+M APVMVELEGETDPL 
Sbjct: 32  GQENVEILPSGERPQANQKRITTPYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLL 91

Query: 328 IAMKELRARKIPFTIRRYLPDGSFEDWGVDELIVED 435
           IAMKEL+ARKIP  IRRYLPDGS+EDWGVDELI+ D
Sbjct: 92  IAMKELKARKIPIIIRRYLPDGSYEDWGVDELIITD 127


>sp|P61218|RPAB2_HUMAN DNA-directed RNA polymerases I, II, and III
           subunit RPABC2 OS=Homo sapiens GN=POLR2F PE=1 SV=1
          Length = 127

 Score =  138 bits (347), Expect = 2e-32
 Identities = 73/96 (76%), Positives = 81/96 (84%), Gaps = 2/96 (2%)
 Frame = +1

Query: 154 GGEDVE-MKDGETP-TDKPRKTTRYMTKYERARVLGTRALQISMNAPVMVELEGETDPLE 327
           G E+VE +  GE P  ++ R TT YMTKYERARVLGTRALQI+M APVMVELEGETDPL 
Sbjct: 32  GQENVEILPSGERPQANQKRITTPYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLL 91

Query: 328 IAMKELRARKIPFTIRRYLPDGSFEDWGVDELIVED 435
           IAMKEL+ARKIP  IRRYLPDGS+EDWGVDELI+ D
Sbjct: 92  IAMKELKARKIPIIIRRYLPDGSYEDWGVDELIITD 127


>sp|P61217|RPAB2_CRIGR DNA-directed RNA polymerases I, II, and III
           subunit RPABC2 OS=Cricetulus griseus GN=POLR2F PE=2 SV=1
          Length = 127

 Score =  138 bits (347), Expect = 2e-32
 Identities = 73/96 (76%), Positives = 81/96 (84%), Gaps = 2/96 (2%)
 Frame = +1

Query: 154 GGEDVE-MKDGETP-TDKPRKTTRYMTKYERARVLGTRALQISMNAPVMVELEGETDPLE 327
           G E+VE +  GE P  ++ R TT YMTKYERARVLGTRALQI+M APVMVELEGETDPL 
Sbjct: 32  GQENVEILPSGERPQANQKRITTPYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLL 91

Query: 328 IAMKELRARKIPFTIRRYLPDGSFEDWGVDELIVED 435
           IAMKEL+ARKIP  IRRYLPDGS+EDWGVDELI+ D
Sbjct: 92  IAMKELKARKIPIIIRRYLPDGSYEDWGVDELIITD 127


>sp|Q32PE0|RPAB2_BOVIN DNA-directed RNA polymerases I, II, and III
           subunit RPABC2 OS=Bos taurus GN=POLR2F PE=2 SV=1
          Length = 127

 Score =  135 bits (340), Expect = 1e-31
 Identities = 69/89 (77%), Positives = 76/89 (85%), Gaps = 1/89 (1%)
 Frame = +1

Query: 172 MKDGETP-TDKPRKTTRYMTKYERARVLGTRALQISMNAPVMVELEGETDPLEIAMKELR 348
           +  GE P  ++ R TT YMTKYERARVLGTRALQI+M APVMVELEGETDPL IAMKEL+
Sbjct: 39  LPSGERPQANQKRITTPYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLLIAMKELK 98

Query: 349 ARKIPFTIRRYLPDGSFEDWGVDELIVED 435
           ARKIP  IRRYLPDGS+EDWGVDELI+ D
Sbjct: 99  ARKIPIIIRRYLPDGSYEDWGVDELIITD 127


>sp|P20435|RPAB2_YEAST DNA-directed RNA polymerases I, II, and III
           subunit RPABC2 OS=Saccharomyces cerevisiae GN=RPO26 PE=1
           SV=1
          Length = 155

 Score =  130 bits (328), Expect = 3e-30
 Identities = 65/87 (74%), Positives = 73/87 (83%)
 Frame = +1

Query: 172 MKDGETPTDKPRKTTRYMTKYERARVLGTRALQISMNAPVMVELEGETDPLEIAMKELRA 351
           +K+   P D+ R TT YMTKYERAR+LGTRALQISMNAPV V+LEGETDPL IAMKEL  
Sbjct: 69  LKEKAIPKDQ-RATTPYMTKYERARILGTRALQISMNAPVFVDLEGETDPLRIAMKELAE 127

Query: 352 RKIPFTIRRYLPDGSFEDWGVDELIVE 432
           +KIP  IRRYLPDGSFEDW V+ELIV+
Sbjct: 128 KKIPLVIRRYLPDGSFEDWSVEELIVD 154


>sp|Q54FA8|RPAB2_DICDI DNA-directed RNA polymerases I, II, and III
           subunit rpabc2 OS=Dictyostelium discoideum GN=polr2f
           PE=3 SV=1
          Length = 133

 Score =  127 bits (320), Expect = 3e-29
 Identities = 60/75 (80%), Positives = 69/75 (92%)
 Frame = +1

Query: 205 RKTTRYMTKYERARVLGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYL 384
           RKTTRYMTKYERAR+LG+RALQISMNAP+MVELEGETDPL+IA KELRA+KIP  IRR+L
Sbjct: 59  RKTTRYMTKYERARLLGSRALQISMNAPIMVELEGETDPLQIAWKELRAKKIPLIIRRFL 118

Query: 385 PDGSFEDWGVDELIV 429
           P+G +EDW VDEL +
Sbjct: 119 PNGMYEDWSVDELSI 133


>sp|P36595|RPAB2_SCHPO DNA-directed RNA polymerases I, II, and III
           subunit RPABC2 OS=Schizosaccharomyces pombe GN=rpb6 PE=2
           SV=1
          Length = 142

 Score =  127 bits (318), Expect = 5e-29
 Identities = 65/100 (65%), Positives = 76/100 (76%), Gaps = 4/100 (4%)
 Frame = +1

Query: 139 PIDTLGGEDVEM----KDGETPTDKPRKTTRYMTKYERARVLGTRALQISMNAPVMVELE 306
           P  T+  EDV      + G+    + R TT YMTKYERAR+LGTRALQISMNAPV+V+LE
Sbjct: 43  PSTTVITEDVASSKTAQSGKAVAKEDRTTTPYMTKYERARILGTRALQISMNAPVLVDLE 102

Query: 307 GETDPLEIAMKELRARKIPFTIRRYLPDGSFEDWGVDELI 426
           GETDPL+IAMKEL  +KIP  +RRYLPDGS+EDW V ELI
Sbjct: 103 GETDPLQIAMKELAQKKIPLLVRRYLPDGSYEDWSVAELI 142


>sp|Q24320|RPAB2_DROME DNA-directed RNA polymerases I, II, and III
           subunit RPABC2 OS=Drosophila melanogaster GN=RpII18 PE=1
           SV=1
          Length = 131

 Score =  126 bits (316), Expect = 9e-29
 Identities = 62/86 (72%), Positives = 73/86 (84%)
 Frame = +1

Query: 181 GETPTDKPRKTTRYMTKYERARVLGTRALQISMNAPVMVELEGETDPLEIAMKELRARKI 360
           G  P  K R TT+YMTKYERARVLGTRALQI+M AP+MVEL+GETDPL+IAMKEL+ +KI
Sbjct: 47  GGVPKSK-RITTKYMTKYERARVLGTRALQIAMCAPIMVELDGETDPLQIAMKELKQKKI 105

Query: 361 PFTIRRYLPDGSFEDWGVDELIVEDS 438
           P  IRRYLPD S+EDW +DELI+ D+
Sbjct: 106 PIIIRRYLPDHSYEDWSIDELIMVDN 131
tr_hit_id A9NU56
Definition tr|A9NU56|A9NU56_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 145
Score (bit) 209.0
E-value 1.0e-52
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945945|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0010_P17, 5'
         (566 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NU56|A9NU56_PICSI Putative uncharacterized protein OS=Picea...   209   1e-52
tr|A2XIZ2|A2XIZ2_ORYSI Putative uncharacterized protein OS=Oryza...   183   5e-45
tr|Q8LI69|Q8LI69_ORYSJ Os07g0463100 protein OS=Oryza sativa subs...   182   1e-44
tr|A2YL15|A2YL15_ORYSI Putative uncharacterized protein OS=Oryza...   182   1e-44
tr|Q9FJ98|Q9FJ98_ARATH DNA-directed RNA polymerase II subunit-li...   181   2e-44
tr|B6TJG4|B6TJG4_MAIZE DNA-directed RNA polymerases I, II, and I...   181   3e-44
tr|B6SI57|B6SI57_MAIZE DNA-directed RNA polymerases I, II, and I...   181   3e-44
tr|B4FLZ6|B4FLZ6_MAIZE Putative uncharacterized protein OS=Zea m...   181   3e-44
tr|Q6F2V1|Q6F2V1_ORYSJ Os03g0586600 protein OS=Oryza sativa subs...   179   7e-44
tr|B6T8K1|B6T8K1_MAIZE DNA-directed RNA polymerases I, II, and I...   178   2e-43
tr|Q9S7Q6|Q9S7Q6_TOBAC DNA-directed RNA polymerase IIb (DNA-dire...   177   4e-43
tr|A2Q3E0|A2Q3E0_MEDTR DNA-directed RNA polymerase, 14 to 18 kDa...   176   8e-43
tr|A3BJH6|A3BJH6_ORYSJ Putative uncharacterized protein OS=Oryza...   175   1e-42
tr|B7FHE6|B7FHE6_MEDTR Putative uncharacterized protein OS=Medic...   174   2e-42
tr|A9TB02|A9TB02_PHYPA Predicted protein (Fragment) OS=Physcomit...   174   2e-42
tr|A7QVJ8|A7QVJ8_VITVI Chromosome chr16 scaffold_189, whole geno...   174   2e-42
tr|A7PJQ3|A7PJQ3_VITVI Chromosome chr12 scaffold_18, whole genom...   172   1e-41
tr|A5AKW7|A5AKW7_VITVI Putative uncharacterized protein OS=Vitis...   169   7e-41
tr|Q9SJ96|Q9SJ96_ARATH Putative DNA-directed RNA polymerase II s...   168   2e-40
tr|B7PRL4|B7PRL4_IXOSC RNA polymerase subunit K, putative OS=Ixo...   141   2e-32
tr|Q3TN04|Q3TN04_MOUSE Putative uncharacterized protein OS=Mus m...   138   2e-31
tr|Q6IAY3|Q6IAY3_HUMAN POLR2F protein (Polymerase (RNA) II (DNA ...   138   2e-31
tr|B2R4H6|B2R4H6_HUMAN cDNA, FLJ92093, highly similar to Homo sa...   138   2e-31
tr|B6MQG1|B6MQG1_BRAFL Putative uncharacterized protein OS=Branc...   136   9e-31
tr|Q9PT88|Q9PT88_CHICK RNA polymerase common subunit RPB6 OS=Gal...   135   2e-30
tr|Q6DGS5|Q6DGS5_DANRE Zgc:92790 OS=Danio rerio GN=zgc:92790 PE=...   135   2e-30
tr|B5G123|B5G123_TAEGU Putative DNA directed RNA polymerase II p...   135   2e-30
tr|B8C3F5|B8C3F5_THAPS Dna-directed RNA polymerase i (Fragment) ...   134   3e-30
tr|Q6BPY7|Q6BPY7_DEBHA DEHA2E09812p OS=Debaryomyces hansenii GN=...   134   3e-30
tr|Q6DDA6|Q6DDA6_XENTR Polymerase (RNA) II (DNA directed) polype...   134   5e-30

>tr|A9NU56|A9NU56_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 147

 Score =  209 bits (531), Expect = 1e-52
 Identities = 103/145 (71%), Positives = 115/145 (79%), Gaps = 2/145 (1%)
 Frame = +1

Query: 28  MADEDFNDFDGGDAGYXXXXXXXXXXXXXXXXXXQ--AAPIDTLGGEDVEMKDGETPTDK 201
           MADED+NDFDGGD GY                  +    P+DTLGG D E  + + P+DK
Sbjct: 1   MADEDYNDFDGGDVGYEEEPPEPEIEEEVAPEEEEHEEVPVDTLGGGDKEPVEQQRPSDK 60

Query: 202 PRKTTRYMTKYERARVLGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRY 381
           PRKT+++MTKYERAR+LGTRALQISMNAPVMVELEGETDPLEIAMKELR RKIPFTIRRY
Sbjct: 61  PRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRY 120

Query: 382 LPDGSFEDWGVDELIVEDSWKRQVG 456
           LPDGS+EDWGVDELIVEDSW+RQVG
Sbjct: 121 LPDGSYEDWGVDELIVEDSWRRQVG 145


>tr|A2XIZ2|A2XIZ2_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_12404 PE=4 SV=1
          Length = 143

 Score =  183 bits (465), Expect = 5e-45
 Identities = 97/145 (66%), Positives = 108/145 (74%)
 Frame = +1

Query: 28  MADEDFNDFDGGDAGYXXXXXXXXXXXXXXXXXXQAAPIDTLGGEDVEMKDGETPTDKPR 207
           MAD+D+ND D G                      +  P + +G E  E K+ E  T +PR
Sbjct: 1   MADDDYNDMDMGYEDEPPEPEIEEGAEEEPENNNEDGPDEVVGAE-AEDKEQEK-TQRPR 58

Query: 208 KTTRYMTKYERARVLGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLP 387
           KT++YMTKYERAR+LGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLP
Sbjct: 59  KTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLP 118

Query: 388 DGSFEDWGVDELIVEDSWKRQVG*G 462
           DGS+EDWGVDELIVEDSWKRQVG G
Sbjct: 119 DGSYEDWGVDELIVEDSWKRQVGGG 143


>tr|Q8LI69|Q8LI69_ORYSJ Os07g0463100 protein OS=Oryza sativa subsp.
           japonica GN=OJ1634_H04.114 PE=2 SV=1
          Length = 142

 Score =  182 bits (461), Expect = 1e-44
 Identities = 95/145 (65%), Positives = 108/145 (74%)
 Frame = +1

Query: 28  MADEDFNDFDGGDAGYXXXXXXXXXXXXXXXXXXQAAPIDTLGGEDVEMKDGETPTDKPR 207
           MA++D+ND D G                      + A  D +G ED + ++    T +PR
Sbjct: 1   MAEDDYNDMDMGYEDEPPEPEIEEGAEEEPENNNEDAVDDVVGAEDDKEQE---KTARPR 57

Query: 208 KTTRYMTKYERARVLGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLP 387
           KT++YMTKYERAR+LGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLP
Sbjct: 58  KTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLP 117

Query: 388 DGSFEDWGVDELIVEDSWKRQVG*G 462
           DGS+EDWGVDELIVEDSWKRQVG G
Sbjct: 118 DGSYEDWGVDELIVEDSWKRQVGGG 142


>tr|A2YL15|A2YL15_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_25904 PE=4 SV=1
          Length = 142

 Score =  182 bits (461), Expect = 1e-44
 Identities = 95/145 (65%), Positives = 108/145 (74%)
 Frame = +1

Query: 28  MADEDFNDFDGGDAGYXXXXXXXXXXXXXXXXXXQAAPIDTLGGEDVEMKDGETPTDKPR 207
           MA++D+ND D G                      + A  D +G ED + ++    T +PR
Sbjct: 1   MAEDDYNDMDMGYEDEPPEPEIEEGAEEEPENNNEDAVDDVVGAEDDKEQE---KTARPR 57

Query: 208 KTTRYMTKYERARVLGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLP 387
           KT++YMTKYERAR+LGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLP
Sbjct: 58  KTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLP 117

Query: 388 DGSFEDWGVDELIVEDSWKRQVG*G 462
           DGS+EDWGVDELIVEDSWKRQVG G
Sbjct: 118 DGSYEDWGVDELIVEDSWKRQVGGG 142


>tr|Q9FJ98|Q9FJ98_ARATH DNA-directed RNA polymerase II subunit-like
           protein OS=Arabidopsis thaliana GN=At5g51940 PE=2 SV=1
          Length = 144

 Score =  181 bits (460), Expect = 2e-44
 Identities = 98/145 (67%), Positives = 109/145 (75%), Gaps = 2/145 (1%)
 Frame = +1

Query: 28  MADEDFNDFDGGDAGYXXXXXXXXXXXXXXXXXXQAAPIDTLGGEDVEMKDG-ET-PTDK 201
           MADED+ND D  D GY                  +    D + GE +E +D  ET P  +
Sbjct: 1   MADEDYNDVD--DLGYEDEPAEPEIEEGVEEDV-EMKENDDVNGEPIEAEDKVETEPVQR 57

Query: 202 PRKTTRYMTKYERARVLGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRY 381
           PRKT+++MTKYERAR+LGTRALQISMNAPVMVELEGETDPLEIAMKELR RKIPFTIRRY
Sbjct: 58  PRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRY 117

Query: 382 LPDGSFEDWGVDELIVEDSWKRQVG 456
           LPDGSFE+WGVDELIVEDSWKRQVG
Sbjct: 118 LPDGSFEEWGVDELIVEDSWKRQVG 142


>tr|B6TJG4|B6TJG4_MAIZE DNA-directed RNA polymerases I, II, and III
           14.4 kDa polypeptide OS=Zea mays PE=2 SV=1
          Length = 142

 Score =  181 bits (458), Expect = 3e-44
 Identities = 95/143 (66%), Positives = 107/143 (74%)
 Frame = +1

Query: 28  MADEDFNDFDGGDAGYXXXXXXXXXXXXXXXXXXQAAPIDTLGGEDVEMKDGETPTDKPR 207
           MAD+D+N+ D G                      + AP D +GGE  + +  +  T + R
Sbjct: 1   MADDDYNEIDMGYED-ELPEPEIEEGAEEELENNEDAPDDVIGGEGEDKE--QEKTKRER 57

Query: 208 KTTRYMTKYERARVLGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLP 387
           KTT+YMTKYERAR+LGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLP
Sbjct: 58  KTTKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLP 117

Query: 388 DGSFEDWGVDELIVEDSWKRQVG 456
           DGS+EDWGVDELIVEDSWKRQVG
Sbjct: 118 DGSYEDWGVDELIVEDSWKRQVG 140


>tr|B6SI57|B6SI57_MAIZE DNA-directed RNA polymerases I, II, and III
           14.4 kDa polypeptide OS=Zea mays PE=2 SV=1
          Length = 142

 Score =  181 bits (458), Expect = 3e-44
 Identities = 95/143 (66%), Positives = 107/143 (74%)
 Frame = +1

Query: 28  MADEDFNDFDGGDAGYXXXXXXXXXXXXXXXXXXQAAPIDTLGGEDVEMKDGETPTDKPR 207
           MAD+D+N+ D G                      + AP D +GGE  + +  +  T + R
Sbjct: 1   MADDDYNEIDMGYED-EPPEPEIEEGAEEEPENNEDAPDDVIGGEGEDKE--QEKTKRER 57

Query: 208 KTTRYMTKYERARVLGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLP 387
           KTT+YMTKYERAR+LGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLP
Sbjct: 58  KTTKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLP 117

Query: 388 DGSFEDWGVDELIVEDSWKRQVG 456
           DGS+EDWGVDELIVEDSWKRQVG
Sbjct: 118 DGSYEDWGVDELIVEDSWKRQVG 140


>tr|B4FLZ6|B4FLZ6_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 142

 Score =  181 bits (458), Expect = 3e-44
 Identities = 95/143 (66%), Positives = 107/143 (74%)
 Frame = +1

Query: 28  MADEDFNDFDGGDAGYXXXXXXXXXXXXXXXXXXQAAPIDTLGGEDVEMKDGETPTDKPR 207
           MAD+D+N+ D G                      + AP D +GGE  + +  +  T + R
Sbjct: 1   MADDDYNEIDMGYED-EPPEPEIEEGAEEELENNEDAPDDVIGGEGEDKE--QEKTKRER 57

Query: 208 KTTRYMTKYERARVLGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLP 387
           KTT+YMTKYERAR+LGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLP
Sbjct: 58  KTTKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLP 117

Query: 388 DGSFEDWGVDELIVEDSWKRQVG 456
           DGS+EDWGVDELIVEDSWKRQVG
Sbjct: 118 DGSYEDWGVDELIVEDSWKRQVG 140


>tr|Q6F2V1|Q6F2V1_ORYSJ Os03g0586600 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBa0010D22.24 PE=2 SV=1
          Length = 142

 Score =  179 bits (455), Expect = 7e-44
 Identities = 96/145 (66%), Positives = 106/145 (73%)
 Frame = +1

Query: 28  MADEDFNDFDGGDAGYXXXXXXXXXXXXXXXXXXQAAPIDTLGGEDVEMKDGETPTDKPR 207
           MAD+D+ND D G                           D + G + E K+ E  T +PR
Sbjct: 1   MADDDYNDMDMGYEDEPPEPEIEEGAEEEPENNEDGP--DEVVGAEAEDKEQEK-TQRPR 57

Query: 208 KTTRYMTKYERARVLGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLP 387
           KT++YMTKYERAR+LGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLP
Sbjct: 58  KTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLP 117

Query: 388 DGSFEDWGVDELIVEDSWKRQVG*G 462
           DGS+EDWGVDELIVEDSWKRQVG G
Sbjct: 118 DGSYEDWGVDELIVEDSWKRQVGGG 142


>tr|B6T8K1|B6T8K1_MAIZE DNA-directed RNA polymerases I, II, and III
           14.4 kDa polypeptide OS=Zea mays PE=2 SV=1
          Length = 142

 Score =  178 bits (451), Expect = 2e-43
 Identities = 94/143 (65%), Positives = 106/143 (74%)
 Frame = +1

Query: 28  MADEDFNDFDGGDAGYXXXXXXXXXXXXXXXXXXQAAPIDTLGGEDVEMKDGETPTDKPR 207
           MA +D+N+ D G                      + AP D +GGE  + +  +  T + R
Sbjct: 1   MAXDDYNEIDMGYED-EPPEPEIEEGAEEEPENNEDAPDDVIGGEGEDKE--QEKTKRER 57

Query: 208 KTTRYMTKYERARVLGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLP 387
           KTT+YMTKYERAR+LGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLP
Sbjct: 58  KTTKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLP 117

Query: 388 DGSFEDWGVDELIVEDSWKRQVG 456
           DGS+EDWGVDELIVEDSWKRQVG
Sbjct: 118 DGSYEDWGVDELIVEDSWKRQVG 140