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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK945959
Clone id YMU02A01NGRL0011_A07
Library
Length 572
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0011_A07. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
TGAGCGCCATGCTTGTGTGGAAGCCGTATGACAACAAGAAGTTCGAGACTCTGTCCTACT
TGCCGCCTTTGTCAAGTGAGCAGATTGCGAAGCAGGTGGACTTCATGGTCCGAAAAGGCT
GGACCCCTTGCATTGAGTTCGACAAAATCGGGAGCGTGTACCGAGAGCACTTCCACGGCA
GCGGCTACTACGATGGGCGGTACTGGGTGATGTGGAAGCTGCCCATGTTTGGCTGCCAAG
ATGCCGCTGCTGTGCTGCGTGAAATTGCAGAGTGCGCAAAGGAGTATCCTGAAGCCCTCA
TCCGCGTGCTGGGCTTTGACGCTAAGAGGCAGGTGCAGGGTCTCCGGCTTCTTTGTTCAA
AAAGCCCTCTGTCCAAAACTTTCTTAAAGGCAAGCCCATTTTATTTGGCCATGAATGCCC
GGCTTTCCCTTTTCCCAACTGGGGCCCAAAAAAAGCTTGGTTCTTTATAACTTTTTTGTG
TCCCCACCCCCTTTTTCCATAAATAAAGGGAAACAAACCTTCCCCCGTGGGGGGGCTTTT
CCCTGGCTTTAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 121
Score (bit) 166.0
E-value 7.0e-41
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945959|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0011_A07, 5'
         (550 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   166   7e-41
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   164   3e-40
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   163   4e-40
sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chai...   162   1e-39
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   161   2e-39
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   161   2e-39
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   160   3e-39
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   160   3e-39
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   160   3e-39
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha...   160   3e-39
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   160   3e-39
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   160   3e-39
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   160   4e-39
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   160   4e-39
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   160   4e-39
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...   160   4e-39
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...   160   5e-39
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch...   159   8e-39
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai...   159   1e-38
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   158   2e-38
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai...   157   2e-38
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   157   2e-38
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai...   157   2e-38
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...   157   3e-38
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai...   157   4e-38
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai...   156   7e-38
sp|Q39746|RBS4_FLAPR Ribulose bisphosphate carboxylase small cha...   156   7e-38
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...   156   7e-38
sp|Q39743|RBS1_FLAPR Ribulose bisphosphate carboxylase small cha...   156   7e-38
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai...   155   9e-38

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  166 bits (420), Expect = 7e-41
 Identities = 72/121 (59%), Positives = 91/121 (75%), Gaps = 1/121 (0%)
 Frame = +3

Query: 9   MLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSG 185
           M VW P   KK+ETLSYLPPLS E ++K++D+++R  W PC+EF+ + G VYREH H  G
Sbjct: 58  MKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPG 117

Query: 186 YYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEALIRVLGFDAKRQVQGLRLLCSKS 365
           YYDGRYW MWKLPMFGC D+A V++E+ EC KEYP A IRV+GFD  RQVQ +  + +K 
Sbjct: 118 YYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDNIRQVQCISFIVAKP 177

Query: 366 P 368
           P
Sbjct: 178 P 178


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
          Length = 182

 Score =  164 bits (415), Expect = 3e-40
 Identities = 75/121 (61%), Positives = 91/121 (75%), Gaps = 1/121 (0%)
 Frame = +3

Query: 9   MLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSG 185
           M VW P   KKFETLSYLPPLSSEQ+AK+VD+++RK   PC+EF+ + G VYREH    G
Sbjct: 60  MQVWPPLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVYREHNRSPG 119

Query: 186 YYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEALIRVLGFDAKRQVQGLRLLCSKS 365
           YYDGRYW MWKLPMFGC D++ VL+E+ EC K YP A IR++GFD KRQVQ +  +  K 
Sbjct: 120 YYDGRYWTMWKLPMFGCNDSSQVLKELEECKKAYPSAFIRIIGFDNKRQVQIISFIAYKP 179

Query: 366 P 368
           P
Sbjct: 180 P 180


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  163 bits (413), Expect = 4e-40
 Identities = 70/118 (59%), Positives = 89/118 (75%)
 Frame = +3

Query: 9   MLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGY 188
           M VW P   KKFETLSYLPPL+ EQ+ ++VD+++R GW PCIEF K+G VYRE+ +  GY
Sbjct: 57  MQVWPPEGKKKFETLSYLPPLTREQLGQEVDYLIRNGWIPCIEFCKVGFVYREYHNSPGY 116

Query: 189 YDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEALIRVLGFDAKRQVQGLRLLCSK 362
           YDGRYW MWKLPMFGC D++ VL+E+ EC+K YP+   R++GFD  RQVQ +  L  K
Sbjct: 117 YDGRYWTMWKLPMFGCTDSSQVLKEVDECSKAYPDYFNRIIGFDNTRQVQCISFLTYK 174


>sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Raphanus sativus GN=RBCS PE=2 SV=1
          Length = 181

 Score =  162 bits (410), Expect = 1e-39
 Identities = 73/123 (59%), Positives = 90/123 (73%), Gaps = 1/123 (0%)
 Frame = +3

Query: 3   SAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHG 179
           S M VW P   KKFETLSYLP LS  ++AK+VD+++R  W PC+EF+ + G VYREH   
Sbjct: 54  SCMKVWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGST 113

Query: 180 SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEALIRVLGFDAKRQVQGLRLLCS 359
            GYYDGRYW MWKLP+FGC D+A VL+E+ EC KEYP ALIR++GFD  RQVQ +  +  
Sbjct: 114 PGYYDGRYWTMWKLPLFGCTDSAQVLKEVQECKKEYPNALIRIIGFDNNRQVQCISFIAY 173

Query: 360 KSP 368
           K P
Sbjct: 174 KPP 176


>sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Helianthus annuus GN=RBCS PE=2 SV=1
          Length = 178

 Score =  161 bits (407), Expect = 2e-39
 Identities = 71/119 (59%), Positives = 92/119 (77%), Gaps = 1/119 (0%)
 Frame = +3

Query: 9   MLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSG 185
           M VW P   KK+ETLSYLPPL+  Q+AK+VD+++RK W PC+EF+ + G VYRE+    G
Sbjct: 56  MKVWPPLGLKKYETLSYLPPLTETQLAKEVDYLLRKKWVPCLEFELEHGFVYRENARSPG 115

Query: 186 YYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEALIRVLGFDAKRQVQGLRLLCSK 362
           YYDGRYW MWKLPMFGC D+A V++E+AEC KEYP+A IR++GFD  RQVQ +  + S+
Sbjct: 116 YYDGRYWTMWKLPMFGCTDSAQVMKELAECKKEYPQAWIRIIGFDNVRQVQCIMFIASR 174


>sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small chain
           1A, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1A
           PE=1 SV=2
          Length = 180

 Score =  161 bits (407), Expect = 2e-39
 Identities = 70/123 (56%), Positives = 90/123 (73%), Gaps = 1/123 (0%)
 Frame = +3

Query: 3   SAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHG 179
           + M VW P   KKFETLSYLP L+  ++AK+VD+++R  W PC+EF+ + G VYREH + 
Sbjct: 54  NCMQVWPPIGKKKFETLSYLPDLTDSELAKEVDYLIRNKWIPCVEFELEHGFVYREHGNS 113

Query: 180 SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEALIRVLGFDAKRQVQGLRLLCS 359
            GYYDGRYW MWKLP+FGC D+A VL+E+ EC KEYP A IR++GFD  RQVQ +  +  
Sbjct: 114 PGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPNAFIRIIGFDNTRQVQCISFIAY 173

Query: 360 KSP 368
           K P
Sbjct: 174 KPP 176


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
          Length = 177

 Score =  160 bits (406), Expect = 3e-39
 Identities = 72/120 (60%), Positives = 86/120 (71%)
 Frame = +3

Query: 3   SAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGS 182
           S M VW P   KKFETLSYLPPLS E +AK+VD+++R  W PCIEF K G VYRE+    
Sbjct: 56  SCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASP 115

Query: 183 GYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEALIRVLGFDAKRQVQGLRLLCSK 362
           GYYDGRYW MWKLPMFGC DA+ V+ E+ E  K YPE  +R++GFD KRQVQ +  +  K
Sbjct: 116 GYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYK 175


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
          Length = 177

 Score =  160 bits (406), Expect = 3e-39
 Identities = 72/120 (60%), Positives = 86/120 (71%)
 Frame = +3

Query: 3   SAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGS 182
           S M VW P   KKFETLSYLPPLS E +AK+VD+++R  W PCIEF K G VYRE+    
Sbjct: 56  SCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASP 115

Query: 183 GYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEALIRVLGFDAKRQVQGLRLLCSK 362
           GYYDGRYW MWKLPMFGC DA+ V+ E+ E  K YPE  +R++GFD KRQVQ +  +  K
Sbjct: 116 GYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYK 175


>sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU40B, chloroplastic OS=Lemna gibba GN=SSU40B PE=3 SV=1
          Length = 177

 Score =  160 bits (406), Expect = 3e-39
 Identities = 72/120 (60%), Positives = 86/120 (71%)
 Frame = +3

Query: 3   SAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGS 182
           S M VW P   KKFETLSYLPPLS E +AK+VD+++R  W PCIEF K G VYRE+    
Sbjct: 56  SCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASP 115

Query: 183 GYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEALIRVLGFDAKRQVQGLRLLCSK 362
           GYYDGRYW MWKLPMFGC DA+ V+ E+ E  K YPE  +R++GFD KRQVQ +  +  K
Sbjct: 116 GYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYK 175


>sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU40A, chloroplastic OS=Lemna gibba GN=SSU40A PE=3 SV=1
          Length = 177

 Score =  160 bits (406), Expect = 3e-39
 Identities = 72/120 (60%), Positives = 86/120 (71%)
 Frame = +3

Query: 3   SAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGS 182
           S M VW P   KKFETLSYLPPLS E +AK+VD+++R  W PCIEF K G VYRE+    
Sbjct: 56  SCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASP 115

Query: 183 GYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEALIRVLGFDAKRQVQGLRLLCSK 362
           GYYDGRYW MWKLPMFGC DA+ V+ E+ E  K YPE  +R++GFD KRQVQ +  +  K
Sbjct: 116 GYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYK 175
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 120
Score (bit) 222.0
E-value 1.0e-56
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945959|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0011_A07, 5'
         (550 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   222   1e-56
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   169   9e-41
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   168   2e-40
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c...   167   3e-40
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c...   167   3e-40
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...   164   4e-39
tr|Q67IU5|Q67IU5_ORYSJ Ribulose bisphosphate carboxylase small c...   162   8e-39
tr|B8AHT7|B8AHT7_ORYSI Putative uncharacterized protein OS=Oryza...   162   8e-39
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c...   162   8e-39
tr|A3A381|A3A381_ORYSJ Ribulose bisphosphate carboxylase small c...   162   8e-39
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c...   162   1e-38
tr|Q9FEE4|Q9FEE4_WHEAT Ribulose bisphosphate carboxylase small c...   162   1e-38
tr|Q9ZRS6|Q9ZRS6_SECCE Ribulose bisphosphate carboxylase small c...   161   2e-38
tr|Q9SNZ6|Q9SNZ6_9POAL Ribulose bisphosphate carboxylase small c...   161   2e-38
tr|Q0WVH4|Q0WVH4_ARATH Ribulose bisphosphate carboxylase small c...   161   2e-38
tr|Q9SDY9|Q9SDY9_9POAL Ribulose bisphosphate carboxylase small c...   160   3e-38
tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small c...   160   4e-38
tr|Q9ZWH3|Q9ZWH3_9POAL Ribulose bisphosphate carboxylase small c...   160   5e-38
tr|Q9ZWH2|Q9ZWH2_AEGBI Ribulose bisphosphate carboxylase small c...   160   5e-38
tr|Q9ZWH1|Q9ZWH1_AEGSE Ribulose bisphosphate carboxylase small c...   160   5e-38
tr|Q9ZWH0|Q9ZWH0_AEGTA Ribulose bisphosphate carboxylase small c...   160   5e-38
tr|Q9ZWG8|Q9ZWG8_TRITU Ribulose bisphosphate carboxylase small c...   160   5e-38
tr|Q9ZWG7|Q9ZWG7_SECCE Ribulose bisphosphate carboxylase small c...   160   5e-38
tr|Q9ZWG5|Q9ZWG5_9POAL Ribulose bisphosphate carboxylase small c...   160   5e-38
tr|Q9ZWG4|Q9ZWG4_AVESA Ribulose bisphosphate carboxylase small c...   160   5e-38
tr|Q9ZWG2|Q9ZWG2_BROCA Ribulose bisphosphate carboxylase small c...   160   5e-38
tr|Q9ZSS0|Q9ZSS0_9POAL Ribulose bisphosphate carboxylase small c...   160   5e-38
tr|Q9ZSK0|Q9ZSK0_9POAL Ribulose bisphosphate carboxylase small c...   160   5e-38
tr|Q9ZSJ9|Q9ZSJ9_9POAL Ribulose bisphosphate carboxylase small c...   160   5e-38
tr|Q9ZNV1|Q9ZNV1_AEGLO Ribulose bisphosphate carboxylase small c...   160   5e-38

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  222 bits (565), Expect = 1e-56
 Identities = 101/120 (84%), Positives = 109/120 (90%)
 Frame = +3

Query: 3   SAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGS 182
           SAMLVWKPYDNKKFETLSYLPPL+++QIAKQV++MVRKGWTPCIEFD IGSVYREHFHGS
Sbjct: 52  SAMLVWKPYDNKKFETLSYLPPLTNDQIAKQVEYMVRKGWTPCIEFDTIGSVYREHFHGS 111

Query: 183 GYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEALIRVLGFDAKRQVQGLRLLCSK 362
           GYYDGRYW+MWKLPMFGC D+ +VLREIAECAKEYP A IRVLGFDAKRQVQ    L  K
Sbjct: 112 GYYDGRYWIMWKLPMFGCTDSGSVLREIAECAKEYPTAFIRVLGFDAKRQVQVAGFLVKK 171


>tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small
           chain OS=Lactuca sativa PE=2 SV=1
          Length = 181

 Score =  169 bits (428), Expect = 9e-41
 Identities = 73/121 (60%), Positives = 92/121 (76%), Gaps = 1/121 (0%)
 Frame = +3

Query: 9   MLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSG 185
           M VW P   KK+ETLSYLPPLS E ++K++D+++R  W PC+EF+ + G VYREH H  G
Sbjct: 58  MKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWVPCLEFELEHGFVYREHHHSPG 117

Query: 186 YYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEALIRVLGFDAKRQVQGLRLLCSKS 365
           YYDGRYW MWKLPMFGC D+A V++E+ EC KEYP A IRV+GFD+ RQVQ +  + SK 
Sbjct: 118 YYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDSVRQVQCISFIVSKP 177

Query: 366 P 368
           P
Sbjct: 178 P 178


>tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small
           chain OS=Panax ginseng PE=2 SV=1
          Length = 183

 Score =  168 bits (425), Expect = 2e-40
 Identities = 74/125 (59%), Positives = 93/125 (74%), Gaps = 1/125 (0%)
 Frame = +3

Query: 9   MLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSG 185
           M VW P   KKFETLSYLP L+ EQ++K+VD+++R GW PC+EF+ + G VYREH H  G
Sbjct: 59  MKVWPPLGLKKFETLSYLPQLTQEQLSKEVDYLLRSGWVPCLEFELEHGFVYREHHHSPG 118

Query: 186 YYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEALIRVLGFDAKRQVQGLRLLCSKS 365
           YYDGRYW MWKLPMFGC D++ VL+E+ EC KEYP A IR++GFD  RQVQ +  +  K 
Sbjct: 119 YYDGRYWTMWKLPMFGCTDSSQVLKEVEECKKEYPNAYIRIIGFDNVRQVQCISFIAFKP 178

Query: 366 PLSKT 380
           P + T
Sbjct: 179 PSAST 183


>tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small
           chain OS=Ammopiptanthus mongolicus PE=2 SV=1
          Length = 174

 Score =  167 bits (424), Expect = 3e-40
 Identities = 73/121 (60%), Positives = 92/121 (76%), Gaps = 1/121 (0%)
 Frame = +3

Query: 9   MLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSG 185
           MLVW P   KKFETLSYLPPLS E + K+V++++RKGW PC+EF+ + G VYRE+    G
Sbjct: 50  MLVWPPLGRKKFETLSYLPPLSIESLTKEVEYLLRKGWVPCLEFELEHGFVYRENNRSPG 109

Query: 186 YYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEALIRVLGFDAKRQVQGLRLLCSKS 365
           YYDGRYW MWKLPMFGC DA+ V++E+ EC KEYP A +R++GFD KRQVQ +  +  K 
Sbjct: 110 YYDGRYWTMWKLPMFGCSDASQVMKELEECKKEYPTAFVRIIGFDNKRQVQCISFIAYKP 169

Query: 366 P 368
           P
Sbjct: 170 P 170


>tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small
           chain OS=Camellia sinensis GN=rbcS PE=2 SV=1
          Length = 176

 Score =  167 bits (423), Expect = 3e-40
 Identities = 73/121 (60%), Positives = 90/121 (74%), Gaps = 1/121 (0%)
 Frame = +3

Query: 9   MLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGS-VYREHFHGSG 185
           M VW P   KKFETLSYLPPL+  Q+ K+VD+++R GW PC+EF   G  VYREH    G
Sbjct: 54  MKVWPPLGLKKFETLSYLPPLTQAQLGKEVDYLIRLGWIPCLEFSVQGGFVYREHNKSPG 113

Query: 186 YYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEALIRVLGFDAKRQVQGLRLLCSKS 365
           YYDGRYW MWKLPMFGC D++ VL+E+ EC KEYP++ IR++GFD KRQVQ +  +C K 
Sbjct: 114 YYDGRYWTMWKLPMFGCTDSSQVLKEVEECKKEYPQSFIRIIGFDNKRQVQCISFICYKP 173

Query: 366 P 368
           P
Sbjct: 174 P 174


>tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small
           chain OS=Populus trichocarpa PE=2 SV=1
          Length = 170

 Score =  164 bits (414), Expect = 4e-39
 Identities = 71/118 (60%), Positives = 87/118 (73%)
 Frame = +3

Query: 9   MLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGY 188
           M  W P +NKKFE LSYLPPLS + IAK++D+M++KGW PC+EFD++GSV REH    GY
Sbjct: 50  MKTWNPINNKKFEALSYLPPLSEDSIAKEIDYMMKKGWIPCLEFDEVGSVRREHSRMPGY 109

Query: 189 YDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEALIRVLGFDAKRQVQGLRLLCSK 362
           YDGRYW +WKLPMFGC D++ VL EI EC K YP+A IR L FD K Q Q +  +  K
Sbjct: 110 YDGRYWTLWKLPMFGCTDSSQVLEEIHECKKAYPDAYIRCLAFDNKHQGQCMAFVIQK 167


>tr|Q67IU5|Q67IU5_ORYSJ Ribulose bisphosphate carboxylase small
           chain OS=Oryza sativa subsp. japonica GN=P0463E12.1 PE=3
           SV=1
          Length = 183

 Score =  162 bits (411), Expect = 8e-39
 Identities = 65/120 (54%), Positives = 91/120 (75%)
 Frame = +3

Query: 9   MLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGY 188
           M  W P+ N+++E +SYLPPLS++ I+K+++F++ KGW PC+EFDK G ++R +    GY
Sbjct: 51  MQTWNPFTNRRYEAMSYLPPLSAKSISKEIEFIMSKGWVPCLEFDKEGEIHRSNSRMPGY 110

Query: 189 YDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEALIRVLGFDAKRQVQGLRLLCSKSP 368
           YDGRYW +WKLPMFGC DAAAVLRE+ EC +EYP+A IR++ FD+ RQ Q +  +  K P
Sbjct: 111 YDGRYWTLWKLPMFGCSDAAAVLREVEECRREYPDAFIRLIAFDSSRQCQCMSFVVHKPP 170


>tr|B8AHT7|B8AHT7_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_05882 PE=4 SV=1
          Length = 183

 Score =  162 bits (411), Expect = 8e-39
 Identities = 65/120 (54%), Positives = 91/120 (75%)
 Frame = +3

Query: 9   MLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGY 188
           M  W P+ N+++E +SYLPPLS++ I+K+++F++ KGW PC+EFDK G ++R +    GY
Sbjct: 51  MQTWNPFTNRRYEAMSYLPPLSAKSISKEIEFIMSKGWVPCLEFDKEGEIHRSNSRMPGY 110

Query: 189 YDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEALIRVLGFDAKRQVQGLRLLCSKSP 368
           YDGRYW +WKLPMFGC DAAAVLRE+ EC +EYP+A IR++ FD+ RQ Q +  +  K P
Sbjct: 111 YDGRYWTLWKLPMFGCSDAAAVLREVEECRREYPDAFIRLIAFDSSRQCQCMSFVVHKPP 170


>tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small
           chain OS=Corchorus olitorius PE=2 SV=1
          Length = 183

 Score =  162 bits (411), Expect = 8e-39
 Identities = 72/125 (57%), Positives = 92/125 (73%), Gaps = 1/125 (0%)
 Frame = +3

Query: 9   MLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSG 185
           M VW P   KKFETLSYLP L+  Q+AK+VD+++R GW PC+EF+ + G VYREH H  G
Sbjct: 58  MQVWPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRSGWIPCLEFELEHGFVYREHHHSPG 117

Query: 186 YYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEALIRVLGFDAKRQVQGLRLLCSKS 365
           YYDGRYW MWKLPMFGC D++ VL+E+ E  K YP+A IR++GFD +RQVQ +  +  K 
Sbjct: 118 YYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPDAFIRIIGFDNRRQVQCISFIAYKP 177

Query: 366 PLSKT 380
           P  K+
Sbjct: 178 PSFKS 182


>tr|A3A381|A3A381_ORYSJ Ribulose bisphosphate carboxylase small
           chain OS=Oryza sativa subsp. japonica GN=OsJ_005253 PE=3
           SV=1
          Length = 234

 Score =  162 bits (411), Expect = 8e-39
 Identities = 65/120 (54%), Positives = 91/120 (75%)
 Frame = +3

Query: 9   MLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGY 188
           M  W P+ N+++E +SYLPPLS++ I+K+++F++ KGW PC+EFDK G ++R +    GY
Sbjct: 102 MQTWNPFTNRRYEAMSYLPPLSAKSISKEIEFIMSKGWVPCLEFDKEGEIHRSNSRMPGY 161

Query: 189 YDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEALIRVLGFDAKRQVQGLRLLCSKSP 368
           YDGRYW +WKLPMFGC DAAAVLRE+ EC +EYP+A IR++ FD+ RQ Q +  +  K P
Sbjct: 162 YDGRYWTLWKLPMFGCSDAAAVLREVEECRREYPDAFIRLIAFDSSRQCQCMSFVVHKPP 221