DK945962
Clone id YMU02A01NGRL0011_A10
Library
Length 419
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0011_A10. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GGAAGCACTCGACAGTACCATCAAGTGTTAGTCATGGCTTCTAAGAAGATAACGTGCATG
CTGGTGATAGTGATGGTGATGCTGGTGGCATACATGAGCAGCGTTGCTAATGCTGAGGTG
GAGGAAGTGGGGCGTAAATTAGTGGCTGGGGCAGGGGCAGAAGCAGGTGAGGAGGCCGAG
TTGTGGGCCAAGAAAGGTCATTACCCTTACAAGAAAGGGTACAAGAAGGGCGGCTACCAC
CACAAGAAGGGCGGCGGCTACGGCAAGGGTCCGGGCCACCCTCACTAACTCAAGGCAGCT
GCTTCGTCCGAGCGCGTCTTCTGTCCGATTCTTGGGTTTATCCACCCCAGACGCGCGTTC
CTTGTGAAATAAATAATACGGTGTCAGCACTGAAGTGTTAAATTTGTCTTTGTTGTTGC
■■Homology search results ■■ -
sp_hit_id Q6ZS49
Definition sp|Q6ZS49|YQ050_HUMAN Putative uncharacterized protein FLJ45831 OS=Homo sapiens
Align length 23
Score (bit) 29.3
E-value 6.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945962|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0011_A10, 5'
(419 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6ZS49|YQ050_HUMAN Putative uncharacterized protein FLJ45831 ... 29 6.4
sp|Q6PW23|MX_EPICO Interferon-induced GTP-binding protein Mx OS=... 29 8.4
sp|Q9BYH8|IKBZ_HUMAN NF-kappa-B inhibitor zeta OS=Homo sapiens G... 29 8.4

>sp|Q6ZS49|YQ050_HUMAN Putative uncharacterized protein FLJ45831
OS=Homo sapiens PE=5 SV=1
Length = 121

Score = 29.3 bits (64), Expect = 6.4
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -3

Query: 399 NTSVLTPYYLFHKERASGVDKPK 331
N S L PYYLFH+ R GVD K
Sbjct: 69 NASKLMPYYLFHRSR--GVDNSK 89


>sp|Q6PW23|MX_EPICO Interferon-induced GTP-binding protein Mx
OS=Epinephelus coioides GN=mx PE=2 SV=1
Length = 626

Score = 28.9 bits (63), Expect = 8.4
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +3

Query: 192 ERSLPLQERVQEGRLPPQEGRRLRQGSGPPS 284
ERSLP E E +L + R GSGPPS
Sbjct: 299 ERSLPRLEEQIEDKLEQTQAELERYGSGPPS 329


>sp|Q9BYH8|IKBZ_HUMAN NF-kappa-B inhibitor zeta OS=Homo sapiens
GN=NFKBIZ PE=1 SV=1
Length = 718

Score = 28.9 bits (63), Expect = 8.4
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3

Query: 273 GPPSLTQGSCFVRARLLSDSWVYPPQTRVPCE 368
GP SL+ G R LL ++ PPQT P E
Sbjct: 167 GPDSLSDGPACKRPALLHSQFLTPPQTPTPGE 198


tr_hit_id Q9FCG8
Definition tr|Q9FCG8|Q9FCG8_STRCO Putative uncharacterized protein SCO4201 OS=Streptomyces coelicolor
Align length 39
Score (bit) 32.7
E-value 9.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945962|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0011_A10, 5'
(419 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q9FCG8|Q9FCG8_STRCO Putative uncharacterized protein SCO4201 ... 33 9.2
tr|B5HLR9|B5HLR9_9ACTO Magnesium or manganese-dependent protein ... 33 9.2

>tr|Q9FCG8|Q9FCG8_STRCO Putative uncharacterized protein SCO4201
OS=Streptomyces coelicolor GN=SCO4201 PE=4 SV=1
Length = 544

Score = 32.7 bits (73), Expect = 9.2
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +3

Query: 183 VGQERSLPLQERVQEGRLPPQEGRRLRQGSGPPSLTQGS 299
V ++RS + R+ EGRL QE RRL +G P L GS
Sbjct: 281 VERKRSDSAERRLAEGRLRAQENRRLERGLLPTPLLAGS 319


>tr|B5HLR9|B5HLR9_9ACTO Magnesium or manganese-dependent protein
phosphatase OS=Streptomyces sviceus ATCC 29083
GN=SSEG_00354 PE=4 SV=1
Length = 478

Score = 32.7 bits (73), Expect = 9.2
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +3

Query: 183 VGQERSLPLQERVQEGRLPPQEGRRLRQGSGPPSLTQGS 299
V ++RS + R+ EGR+ QE RRL +G P L +GS
Sbjct: 215 VERKRSDTAERRLAEGRVRAQENRRLERGLLPTPLLEGS 253