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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK945983
Clone id YMU02A01NGRL0011_B08
Library
Length 286
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0011_B08. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
TATTTGCAACCCCATCATTGCTCGTATGTACCAAGGTGGTGCTGGTGATGTTCCTCCTGG
TGCTTATGGCGGCGCTGAGGATGATGGGCATGGTCATTCTGGTGGAGGTGCTGGGCCCAA
GATTGAAGAGGTTGACTAAATTTCTCCCCTAGGCTGTAGTGCACCCTGTTCAAGGTTCGG
ACGGGGTTAATTATTTGTTGGACATCTTGAATGTGATTAAATTTTTGCAACAGTTTTTGT
GGATGCTCCACAATTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P26413
Definition sp|P26413|HSP70_SOYBN Heat shock 70 kDa protein OS=Glycine max
Align length 48
Score (bit) 40.0
E-value 0.004
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945983|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0011_B08, 5'
         (257 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P26413|HSP70_SOYBN Heat shock 70 kDa protein OS=Glycine max G...    40   0.004
sp|P26791|HSP70_DAUCA Heat shock 70 kDa protein OS=Daucus carota...    39   0.010
sp|P22954|HSP72_ARATH Heat shock cognate 70 kDa protein 2 OS=Ara...    38   0.018
sp|O65719|HSP73_ARATH Heat shock cognate 70 kDa protein 3 OS=Ara...    37   0.039
sp|P22953|HSP71_ARATH Heat shock cognate 70 kDa protein 1 OS=Ara...    36   0.052
sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein OS=Petun...    36   0.067
sp|P24629|HSP71_SOLLC Heat shock cognate 70 kDa protein 1 OS=Sol...    36   0.067
sp|P25840|HSP70_CHLRE Heat shock 70 kDa protein OS=Chlamydomonas...    35   0.11 
sp|P29357|HSP7E_SPIOL Chloroplast envelope membrane 70 kDa heat ...    35   0.15 
sp|P27322|HSP72_SOLLC Heat shock cognate 70 kDa protein 2 OS=Sol...    35   0.15 
sp|Q24789|HSP70_ECHGR Heat shock cognate 70 kDa protein OS=Echin...    33   0.44 
sp|P02827|HSP70_XENLA Heat shock 70 kDa protein OS=Xenopus laevi...    33   0.57 
sp|Q28222|HSP71_CERAE Heat shock 70 kDa protein 1 OS=Cercopithec...    32   0.74 
sp|Q27965|HS71B_BOVIN Heat shock 70 kDa protein 1B OS=Bos taurus...    32   1.3  
sp|Q4U0F3|HS71B_BOSMU Heat shock 70 kDa protein 1B OS=Bos mutus ...    32   1.3  
sp|Q27975|HS71A_BOVIN Heat shock 70 kDa protein 1A OS=Bos taurus...    32   1.3  
sp|P17804|HSP70_LEIDO Heat shock 70 kDa protein OS=Leishmania do...    31   1.7  
sp|P27894|HSP70_LEIBR Heat shock 70 kDa protein (Fragment) OS=Le...    31   1.7  
sp|P11145|HSP74_TRYBB Heat shock 70 kDa protein 4 OS=Trypanosoma...    31   2.2  
sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 OS=Hom...    31   2.2  
sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein OS=Brugia malayi...    31   2.2  
sp|P11147|HSP7D_DROME Heat shock 70 kDa protein cognate 4 OS=Dro...    30   2.8  
sp|P14659|HSP72_RAT Heat shock-related 70 kDa protein 2 OS=Rattu...    30   2.8  
sp|P17156|HSP72_MOUSE Heat shock-related 70 kDa protein 2 OS=Mus...    30   2.8  
sp|Q9TUG3|HSP72_CAPHI Heat shock-related 70 kDa protein 2 OS=Cap...    30   2.8  
sp|P34933|HSP72_BOVIN Heat shock-related 70 kDa protein 2 OS=Bos...    30   2.8  
sp|P11143|HSP70_MAIZE Heat shock 70 kDa protein OS=Zea mays GN=H...    30   2.8  
sp|Q5R7D3|HSP71_PONAB Heat shock 70 kDa protein 1 OS=Pongo abeli...    30   3.7  
sp|P08107|HSP71_HUMAN Heat shock 70 kDa protein 1 OS=Homo sapien...    30   3.7  
sp|Q07437|HSP70_LEIAM Heat shock 70 kDa protein OS=Leishmania am...    30   3.7  

>sp|P26413|HSP70_SOYBN Heat shock 70 kDa protein OS=Glycine max
           GN=HSP70 PE=3 SV=1
          Length = 645

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 25/48 (52%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = +2

Query: 2   ICNPIIARMYQGGA---GDVPPGAYXXXXXXXXXXXXXXXXPKIEEVD 136
           ICNPIIA+MYQG A   GDVP GA                 PKIEEVD
Sbjct: 607 ICNPIIAKMYQGAAGPGGDVPMGA---------DMPAAGAGPKIEEVD 645


>sp|P26791|HSP70_DAUCA Heat shock 70 kDa protein OS=Daucus carota
           GN=HSP70 PE=3 SV=1
          Length = 655

 Score = 38.5 bits (88), Expect = 0.010
 Identities = 23/52 (44%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
 Frame = +2

Query: 2   ICNPIIARMYQ-------GGAGDVPPGAYXXXXXXXXXXXXXXXXPKIEEVD 136
           +CNPIIAR+YQ       GG GD+P G Y                PKIEEVD
Sbjct: 610 LCNPIIARLYQGRGDVPIGGPGDMPGGGY------GGSRGSSGAGPKIEEVD 655


>sp|P22954|HSP72_ARATH Heat shock cognate 70 kDa protein 2
           OS=Arabidopsis thaliana GN=HSC70-2 PE=2 SV=2
          Length = 653

 Score = 37.7 bits (86), Expect = 0.018
 Identities = 23/47 (48%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = +2

Query: 2   ICNPIIARMYQGGAGDVP--PGAYXXXXXXXXXXXXXXXXPKIEEVD 136
           +CNPIIA+MYQGGAG     PGA                 PKIEEVD
Sbjct: 608 VCNPIIAKMYQGGAGGEAGGPGA-SGMDEDEAPPASGGAGPKIEEVD 653


>sp|O65719|HSP73_ARATH Heat shock cognate 70 kDa protein 3
           OS=Arabidopsis thaliana GN=HSC70-3 PE=1 SV=1
          Length = 649

 Score = 36.6 bits (83), Expect = 0.039
 Identities = 24/55 (43%), Positives = 25/55 (45%), Gaps = 10/55 (18%)
 Frame = +2

Query: 2   ICNPIIARMYQGGAG----------DVPPGAYXXXXXXXXXXXXXXXXPKIEEVD 136
           ICNPIIA+MYQGG            DVPP A                 PKIEEVD
Sbjct: 608 ICNPIIAKMYQGGEAGGPAAGGMDEDVPPSA-------------GGAGPKIEEVD 649


>sp|P22953|HSP71_ARATH Heat shock cognate 70 kDa protein 1
           OS=Arabidopsis thaliana GN=HSC70-1 PE=1 SV=3
          Length = 651

 Score = 36.2 bits (82), Expect = 0.052
 Identities = 22/46 (47%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +2

Query: 2   ICNPIIARMYQGGAGDV-PPGAYXXXXXXXXXXXXXXXXPKIEEVD 136
           ICNPIIA+MYQG  G+   PGA                 PKIEEVD
Sbjct: 608 ICNPIIAKMYQGAGGEAGGPGA--SGMDDDAPPASGGAGPKIEEVD 651


>sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein OS=Petunia
           hybrida GN=HSP70 PE=2 SV=1
          Length = 651

 Score = 35.8 bits (81), Expect = 0.067
 Identities = 21/45 (46%), Positives = 22/45 (48%)
 Frame = +2

Query: 2   ICNPIIARMYQGGAGDVPPGAYXXXXXXXXXXXXXXXXPKIEEVD 136
           ICNPIIA+MYQGGAG                       PKIEEVD
Sbjct: 608 ICNPIIAKMYQGGAGGATMDE-DGPSVGGSAGSQTGAGPKIEEVD 651


>sp|P24629|HSP71_SOLLC Heat shock cognate 70 kDa protein 1
           OS=Solanum lycopersicum GN=HSC-I PE=2 SV=1
          Length = 650

 Score = 35.8 bits (81), Expect = 0.067
 Identities = 21/45 (46%), Positives = 22/45 (48%)
 Frame = +2

Query: 2   ICNPIIARMYQGGAGDVPPGAYXXXXXXXXXXXXXXXXPKIEEVD 136
           ICNPIIA+MYQG  GD    A                 PKIEEVD
Sbjct: 610 ICNPIIAKMYQGAGGD----AGVPMDDDAPPSGGSSAGPKIEEVD 650


>sp|P25840|HSP70_CHLRE Heat shock 70 kDa protein OS=Chlamydomonas
           reinhardtii GN=HSP70 PE=2 SV=2
          Length = 650

 Score = 35.0 bits (79), Expect = 0.11
 Identities = 21/47 (44%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = +2

Query: 2   ICNPIIARMYQG--GAGDVPPGAYXXXXXXXXXXXXXXXXPKIEEVD 136
           +CNPII R+YQG  GAG +P G                  PKIEEVD
Sbjct: 607 LCNPIITRLYQGGAGAGGMPGGG---AGAGAAPSGGSGAGPKIEEVD 650


>sp|P29357|HSP7E_SPIOL Chloroplast envelope membrane 70 kDa heat
           shock-related protein OS=Spinacia oleracea GN=SCE70 PE=1
           SV=3
          Length = 653

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 14/20 (70%), Positives = 16/20 (80%)
 Frame = +2

Query: 2   ICNPIIARMYQGGAGDVPPG 61
           ICNPIIA+MYQG  GD+  G
Sbjct: 608 ICNPIIAKMYQGAGGDMGGG 627


>sp|P27322|HSP72_SOLLC Heat shock cognate 70 kDa protein 2
           OS=Solanum lycopersicum GN=HSC-2 PE=2 SV=1
          Length = 644

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 19/45 (42%), Positives = 22/45 (48%)
 Frame = +2

Query: 2   ICNPIIARMYQGGAGDVPPGAYXXXXXXXXXXXXXXXXPKIEEVD 136
           +CNPIIA+MYQG  GD+                     PKIEEVD
Sbjct: 608 LCNPIIAKMYQGAGGDM--------DDEGPAPSGGGAGPKIEEVD 644
tr_hit_id A9TWS0
Definition tr|A9TWS0|A9TWS0_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens
Align length 45
Score (bit) 41.2
E-value 0.026
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945983|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0011_B08, 5'
         (257 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TWS0|A9TWS0_PHYPA Predicted protein (Fragment) OS=Physcomit...    41   0.026
tr|A9TWR9|A9TWR9_PHYPA Predicted protein OS=Physcomitrella paten...    41   0.026
tr|Q8LKP8|Q8LKP8_SAUME Heat shock protein 70 OS=Saussurea medusa...    41   0.034
tr|Q7Y1W0|Q7Y1W0_SAUME Heat shock protein 70 (Fragment) OS=Sauss...    41   0.034
tr|Q5MCL0|Q5MCL0_SAUME Heat shock protein hsp70 OS=Saussurea med...    41   0.034
tr|Q40980|Q40980_PEA PsHSP71.2 (Heat shock protein hsp70) OS=Pis...    41   0.034
tr|Q40511|Q40511_TOBAC Heat shock protein 70 (Fragment) OS=Nicot...    41   0.034
tr|Q3I5Q5|Q3I5Q5_VOLCA Heat-shock inducible Hsp70 OS=Volvox cart...    40   0.058
tr|B2MW33|B2MW33_HEVBR Heat-shock protein 70 OS=Hevea brasiliens...    40   0.058
tr|A9S0A3|A9S0A3_PHYPA Predicted protein OS=Physcomitrella paten...    40   0.076
tr|A9QVI7|A9QVI7_9ASTR Heat shock protein 70 OS=Ageratina adenop...    40   0.076
tr|A4UTL2|A4UTL2_9ASTR Heat shock protein 70 (Fragment) OS=Agera...    40   0.076
tr|Q9M6R1|Q9M6R1_MALDO High molecular weight heat shock protein ...    39   0.100
tr|Q5MGA8|Q5MGA8_MEDSA Heat shock protein 70 OS=Medicago sativa ...    39   0.100
tr|B7FL88|B7FL88_MEDTR Putative uncharacterized protein OS=Medic...    39   0.100
tr|A9RCV9|A9RCV9_PHYPA Predicted protein OS=Physcomitrella paten...    39   0.100
tr|Q5QHT3|Q5QHT3_9FABA 70 kDa heat shock cognate protein 2 OS=Vi...    39   0.13 
tr|Q8RY44|Q8RY44_DUNSA Heat shock protein 70a OS=Dunaliella sali...    39   0.17 
tr|Q8GSN3|Q8GSN3_CUCMA Non-cell-autonomous heat shock cognate pr...    39   0.17 
tr|Q5QHT2|Q5QHT2_9FABA 70 kDa heat shock cognate protein 3 OS=Vi...    39   0.17 
tr|A9U4N3|A9U4N3_PHYPA Predicted protein OS=Physcomitrella paten...    39   0.17 
tr|A9SNF1|A9SNF1_PHYPA Predicted protein OS=Physcomitrella paten...    39   0.17 
tr|A7PFP3|A7PFP3_VITVI Chromosome chr11 scaffold_14, whole genom...    39   0.17 
tr|B4FRL9|B4FRL9_MAIZE Putative uncharacterized protein OS=Zea m...    38   0.22 
tr|Q2HT97|Q2HT97_MEDTR Heat shock protein Hsp70 OS=Medicago trun...    38   0.29 
tr|Q0WUQ6|Q0WUQ6_ARATH DnaK-type molecular chaperone hsc70.1-lik...    38   0.29 
tr|O04293|O04293_ARATH Hsc70-G8 protein (Fragment) OS=Arabidopsi...    38   0.29 
tr|A7NZ36|A7NZ36_VITVI Chromosome chr6 scaffold_3, whole genome ...    38   0.29 
tr|Q41374|Q41374_SPIOL Heat shock protein (Cytosolic heat shock ...    37   0.38 
tr|Q9M4E7|Q9M4E7_CUCSA Heat shock protein 70 OS=Cucumis sativus ...    37   0.49 

>tr|A9TWS0|A9TWS0_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_151956 PE=3 SV=1
          Length = 220

 Score = 41.2 bits (95), Expect = 0.026
 Identities = 23/45 (51%), Positives = 24/45 (53%)
 Frame = +2

Query: 2   ICNPIIARMYQGGAGDVPPGAYXXXXXXXXXXXXXXXXPKIEEVD 136
           +CNPIIARMYQGGAG    GA                 PKIEEVD
Sbjct: 178 VCNPIIARMYQGGAGGAAGGA--PSYGGDDDAAPSGAGPKIEEVD 220


>tr|A9TWR9|A9TWR9_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_226216 PE=3 SV=1
          Length = 650

 Score = 41.2 bits (95), Expect = 0.026
 Identities = 23/45 (51%), Positives = 24/45 (53%)
 Frame = +2

Query: 2   ICNPIIARMYQGGAGDVPPGAYXXXXXXXXXXXXXXXXPKIEEVD 136
           +CNPIIARMYQGGAG    GA                 PKIEEVD
Sbjct: 608 VCNPIIARMYQGGAGGAAGGA--PSYGGDDDAAPSGAGPKIEEVD 650


>tr|Q8LKP8|Q8LKP8_SAUME Heat shock protein 70 OS=Saussurea medusa
           GN=HSP70 PE=2 SV=1
          Length = 647

 Score = 40.8 bits (94), Expect = 0.034
 Identities = 22/45 (48%), Positives = 24/45 (53%)
 Frame = +2

Query: 2   ICNPIIARMYQGGAGDVPPGAYXXXXXXXXXXXXXXXXPKIEEVD 136
           +CNPIIA+MYQGGAGD   G                  PKIEEVD
Sbjct: 608 VCNPIIAKMYQGGAGDAAGG-----MDEDAAPSGGGAGPKIEEVD 647


>tr|Q7Y1W0|Q7Y1W0_SAUME Heat shock protein 70 (Fragment)
           OS=Saussurea medusa GN=HSP70 PE=2 SV=1
          Length = 427

 Score = 40.8 bits (94), Expect = 0.034
 Identities = 22/45 (48%), Positives = 24/45 (53%)
 Frame = +2

Query: 2   ICNPIIARMYQGGAGDVPPGAYXXXXXXXXXXXXXXXXPKIEEVD 136
           +CNPIIA+MYQGGAGD   G                  PKIEEVD
Sbjct: 388 VCNPIIAKMYQGGAGDAAGG-----MDEDAAPSGGGAGPKIEEVD 427


>tr|Q5MCL0|Q5MCL0_SAUME Heat shock protein hsp70 OS=Saussurea medusa
           PE=3 SV=1
          Length = 647

 Score = 40.8 bits (94), Expect = 0.034
 Identities = 22/45 (48%), Positives = 24/45 (53%)
 Frame = +2

Query: 2   ICNPIIARMYQGGAGDVPPGAYXXXXXXXXXXXXXXXXPKIEEVD 136
           +CNPIIA+MYQGGAGD   G                  PKIEEVD
Sbjct: 608 VCNPIIAKMYQGGAGDAAGG-----MDEDAAPSGGGAGPKIEEVD 647


>tr|Q40980|Q40980_PEA PsHSP71.2 (Heat shock protein hsp70) OS=Pisum
           sativum GN=hsp70 PE=2 SV=1
          Length = 648

 Score = 40.8 bits (94), Expect = 0.034
 Identities = 24/46 (52%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = +2

Query: 2   ICNPIIARMYQGGA-GDVPPGAYXXXXXXXXXXXXXXXXPKIEEVD 136
           +CNPIIA+MYQGGA GDVP G                  PKIEEVD
Sbjct: 607 VCNPIIAKMYQGGAGGDVPMG----DGMPGGGSNGSGPGPKIEEVD 648


>tr|Q40511|Q40511_TOBAC Heat shock protein 70 (Fragment)
           OS=Nicotiana tabacum GN=Nthsp70 PE=2 SV=1
          Length = 573

 Score = 40.8 bits (94), Expect = 0.034
 Identities = 25/48 (52%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
 Frame = +2

Query: 2   ICNPIIARMYQGGA-GDVPPG--AYXXXXXXXXXXXXXXXXPKIEEVD 136
           +CNPIIA+MYQGGA GDVP G  A                 PKIEEVD
Sbjct: 526 LCNPIIAKMYQGGADGDVPMGGSADTGAGYGKAGSTNNGAGPKIEEVD 573


>tr|Q3I5Q5|Q3I5Q5_VOLCA Heat-shock inducible Hsp70 OS=Volvox carteri
           f. nagariensis GN=hsp70A PE=2 SV=1
          Length = 649

 Score = 40.0 bits (92), Expect = 0.058
 Identities = 21/45 (46%), Positives = 24/45 (53%)
 Frame = +2

Query: 2   ICNPIIARMYQGGAGDVPPGAYXXXXXXXXXXXXXXXXPKIEEVD 136
           +CNPII R+YQGGAG +P G                  PKIEEVD
Sbjct: 608 VCNPIITRLYQGGAGGMPGG---PAPGAGASSGGSGAGPKIEEVD 649


>tr|B2MW33|B2MW33_HEVBR Heat-shock protein 70 OS=Hevea brasiliensis
           GN=HSP70 PE=2 SV=1
          Length = 655

 Score = 40.0 bits (92), Expect = 0.058
 Identities = 24/48 (50%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = +2

Query: 2   ICNPIIARMYQGGA-GDVPPGA--YXXXXXXXXXXXXXXXXPKIEEVD 136
           +CNPIIA+MYQGGA GDVP G                    PKIEEVD
Sbjct: 608 LCNPIIAKMYQGGAGGDVPVGGAEMPNSNYGKTSSGGSGAGPKIEEVD 655


>tr|A9S0A3|A9S0A3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_207434 PE=3 SV=1
          Length = 648

 Score = 39.7 bits (91), Expect = 0.076
 Identities = 25/48 (52%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
 Frame = +2

Query: 2   ICNPIIARMYQGGAG---DVPPGAYXXXXXXXXXXXXXXXXPKIEEVD 136
           ICNPIIARMYQGGAG    VPP                   PKIEEVD
Sbjct: 608 ICNPIIARMYQGGAGGERPVPP-------YGGSDSPPSGAGPKIEEVD 648