DK946001 |
Clone id |
YMU02A01NGRL0011_C05 |
Library |
YMU02 |
Length |
577 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0011_C05. 5' end sequence. |
Accession |
DK946001 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL140Contig1 |
Sequence |
CACATCATTTCTGTCGATCTGTTGTTCTAGGCACCGCTTTGCTTTTCAGCTCACGATTTC TGTTAATCTCTTGTCCTGGGCACTGCCCTCTTCCCTGTCTGCAGAGTGTGGGCGCCTCTT GATAGAGCAGGACCCCTTGTTGTCCCTGTTTGTGCGTGTGTATCTGCTGGTGCCGCCCAT GGCTCAAGAAAGCTGGAACTGCGACACGGCAGAGGGAAGTGGGTGCCAGCAGCAAGAGGG CCTTGCGCTCTGCCCAAACAATTGCGGTTTTTTTGGCTGTGCCGCCACCATGAATCTCTG CTCTAAGTGCTACAGAGAACTCACCTTGAAGAAGCAAGGGAGCCCCTCTGAGTTATCTAT AATCACCTCTGCGTCCGCCACAACTCCGGTGCATCTCTCTCCTGTCGGATCTGAGAAGTC CTGTGCAAAATCTCCCTTTTCACTCTCATTGCCTGCATCTGTCGAACCCCTTAAGGCTCA AATAGCTCTTCCGTCTTCGGTAATGGGTGAGATTTCACCGATTTCTACTGGCTTGGTGGA GTCAGTGAGCCCTTCGAGCTCGCGGTCACATGCTACT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6H7P8 |
Definition |
sp|Q6H7P8|SAP4_ORYSJ Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Oryza sativa subsp. japonica |
Align length |
97 |
Score (bit) |
69.3 |
E-value |
1.0e-11 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NKD1 |
Definition |
tr|A9NKD1|A9NKD1_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
79 |
Score (bit) |
79.7 |
E-value |
1.0e-13 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK946001|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0011_C05, 5' (577 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NKD1|A9NKD1_PICSI Putative uncharacterized protein OS=Picea... 80 1e-13 tr|A9NZK1|A9NZK1_PICSI Putative uncharacterized protein OS=Picea... 73 1e-11 tr|A9NK42|A9NK42_PICSI Putative uncharacterized protein OS=Picea... 73 1e-11 tr|A7PPF9|A7PPF9_VITVI Chromosome chr8 scaffold_23, whole genome... 72 3e-11 tr|B3IX31|B3IX31_LOTJA Transcription factor C2H2 OS=Lotus japoni... 71 5e-11 tr|A3A445|A3A445_ORYSJ cDNA clone:001-042-A06, full insert seque... 69 1e-10 tr|A2X203|A2X203_ORYSI Putative uncharacterized protein OS=Oryza... 69 1e-10 tr|A9NUS5|A9NUS5_PICSI Putative uncharacterized protein OS=Picea... 68 3e-10 tr|Q6R3I8|Q6R3I8_MAIZE Putative zinc finger protein ZmZf OS=Zea ... 67 7e-10 tr|Q3BCU2|Q3BCU2_MAIZE Zinc finger A20 and AN1 domains-containin... 67 7e-10 tr|B7E4H0|B7E4H0_ORYSJ cDNA clone:006-301-C11, full insert seque... 67 7e-10 tr|A8QZ71|A8QZ71_MAIZE Putative uncharacterized protein OS=Zea m... 67 7e-10 tr|B8LRP0|B8LRP0_PICSI Putative uncharacterized protein OS=Picea... 66 1e-09 tr|Q6T7D0|Q6T7D0_GOSBA Fiber protein Fb37 OS=Gossypium barbadens... 66 2e-09 tr|Q4TZT8|Q4TZT8_GOSHI Fb37 OS=Gossypium hirsutum PE=2 SV=1 66 2e-09 tr|B6SN92|B6SN92_MAIZE Zinc finger A20 and AN1 domains-containin... 66 2e-09 tr|B4F8R6|B4F8R6_MAIZE Putative uncharacterized protein OS=Zea m... 66 2e-09 tr|A5BFH0|A5BFH0_VITVI Putative uncharacterized protein (Chromos... 65 2e-09 tr|B4FDQ8|B4FDQ8_MAIZE Putative uncharacterized protein OS=Zea m... 65 4e-09 tr|A9PJ34|A9PJ34_POPJC Putative uncharacterized protein OS=Popul... 64 5e-09 tr|A9PEQ1|A9PEQ1_POPTR Putative uncharacterized protein OS=Popul... 64 5e-09 tr|A9TKL7|A9TKL7_PHYPA Predicted protein OS=Physcomitrella paten... 64 8e-09 tr|A9RR10|A9RR10_PHYPA Predicted protein OS=Physcomitrella paten... 63 1e-08 tr|A1ECK5|A1ECK5_9ROSI Putative multiple stress-responsive zinc-... 62 2e-08 tr|B7FMV3|B7FMV3_MEDTR Putative uncharacterized protein OS=Medic... 61 4e-08 tr|B7FGP6|B7FGP6_MEDTR Putative uncharacterized protein OS=Medic... 61 4e-08 tr|A9NYV7|A9NYV7_PICSI Putative uncharacterized protein OS=Picea... 61 5e-08 tr|A9NK82|A9NK82_PICSI Putative uncharacterized protein OS=Picea... 61 5e-08 tr|A9S5V1|A9S5V1_PHYPA Predicted protein OS=Physcomitrella paten... 60 7e-08 tr|B8AL94|B8AL94_ORYSI Putative uncharacterized protein OS=Oryza... 60 9e-08
>tr|A9NKD1|A9NKD1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 181
Score = 79.7 bits (195), Expect = 1e-13 Identities = 39/79 (49%), Positives = 54/79 (68%), Gaps = 1/79 (1%) Frame = +2
Query: 179 MAQESWNCDTAEGSGCQQQEGLALCPNNCGFFGCAATMNLCSKCYRELTLKKQGSPSELS 358 M QE+WN A+G+GCQ EG LC NNCGFFG +AT NLCSKCYR+L +K+ + S ++ Sbjct: 1 MDQENWNIG-ADGTGCQAPEGHTLCANNCGFFGSSATRNLCSKCYRDLIMKEAQATSAMA 59
Query: 359 II-TSASATTPVHLSPVGS 412 + S +A +P+ P+ S Sbjct: 60 AVEKSFAAGSPMDEVPLSS 78
>tr|A9NZK1|A9NZK1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 180
Score = 73.2 bits (178), Expect = 1e-11 Identities = 34/50 (68%), Positives = 37/50 (74%) Frame = +2
Query: 179 MAQESWNCDTAEGSGCQQQEGLALCPNNCGFFGCAATMNLCSKCYRELTL 328 MAQESWN + E +GCQ EGL C NNCGFFG ATM+LCSKCYRE L Sbjct: 1 MAQESWNREKEE-TGCQVPEGLIRCANNCGFFGSPATMSLCSKCYREFVL 49
>tr|A9NK42|A9NK42_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 180
Score = 73.2 bits (178), Expect = 1e-11 Identities = 34/50 (68%), Positives = 37/50 (74%) Frame = +2
Query: 179 MAQESWNCDTAEGSGCQQQEGLALCPNNCGFFGCAATMNLCSKCYRELTL 328 MAQESWN + E +GCQ EGL C NNCGFFG ATM+LCSKCYRE L Sbjct: 1 MAQESWNREKEE-TGCQVPEGLIRCANNCGFFGSPATMSLCSKCYREFVL 49
>tr|A7PPF9|A7PPF9_VITVI Chromosome chr8 scaffold_23, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00021636001 PE=4 SV=1 Length = 161
Score = 71.6 bits (174), Expect = 3e-11 Identities = 44/113 (38%), Positives = 64/113 (56%), Gaps = 6/113 (5%) Frame = +2
Query: 209 AEGSGCQQQEGLALCPNNCGFFGCAATMNLCSKCYRELTLKKQGSPS-----ELSIITSA 373 AE C+ EG LC NNCGFFG AT+NLCSKCYR+L LK++ + S E S+ ++ Sbjct: 2 AEEHRCEAPEGHRLCANNCGFFGSPATLNLCSKCYRDLRLKEEQASSAKSAVEKSLSAAS 61
Query: 374 SATTPVHLSPVGSEKSCAKSPFSLSLPASVEPLKAQIALPSSVMGEI-SPIST 529 S+T P+ SP +L+LP + +I +P++V + SP +T Sbjct: 62 SSTAPL-------------SPPALTLPEAAN----EITVPAAVTAAVPSPSAT 97
>tr|B3IX31|B3IX31_LOTJA Transcription factor C2H2 OS=Lotus japonicus GN=ZF-M39 PE=2 SV=1 Length = 165
Score = 70.9 bits (172), Expect = 5e-11 Identities = 45/106 (42%), Positives = 54/106 (50%), Gaps = 4/106 (3%) Frame = +2
Query: 209 AEGSGCQQQEGLALCPNNCGFFGCAATMNLCSKCYRELTLKKQGSPSELSIITSASATTP 388 AE C+ EG LC NNCGF G ATM+LCSKCYR++ LK+Q S S I +A Sbjct: 2 AEEHRCEAPEGHRLCVNNCGFSGSPATMDLCSKCYRDIRLKEQQEASTKSTIETA----- 56
Query: 389 VHLSPVGSEKSCAKSPFSLSLPAS----VEPLKAQIALPSSVMGEI 514 + S S AK P S S P+ P KA+ A S G I Sbjct: 57 -----LSSSSSVAKPPSSTSSPSPAVDLAPPAKAETASISLTAGPI 97
>tr|A3A445|A3A445_ORYSJ cDNA clone:001-042-A06, full insert sequence OS=Oryza sativa subsp. japonica GN=OsJ_005567 PE=2 SV=1 Length = 173
Score = 69.3 bits (168), Expect = 1e-10 Identities = 40/97 (41%), Positives = 56/97 (57%) Frame = +2
Query: 218 SGCQQQEGLALCPNNCGFFGCAATMNLCSKCYRELTLKKQGSPSELSIITSASATTPVHL 397 +GCQQ EG LC NNCGFFG AATMN+CSKC++E+ +K+ E + + ++S + V+ Sbjct: 6 AGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKE-----EQAKLAASSIDSIVNG 60
Query: 398 SPVGSEKSCAKSPFSLSLPASVEPLKAQIALPSSVMG 508 G E A S + A VE K + P+ V G Sbjct: 61 CDGGKEHIVAASGSTAVAVAQVE-AKTLVVQPTDVAG 96
>tr|A2X203|A2X203_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06227 PE=4 SV=1 Length = 173
Score = 69.3 bits (168), Expect = 1e-10 Identities = 40/97 (41%), Positives = 56/97 (57%) Frame = +2
Query: 218 SGCQQQEGLALCPNNCGFFGCAATMNLCSKCYRELTLKKQGSPSELSIITSASATTPVHL 397 +GCQQ EG LC NNCGFFG AATMN+CSKC++E+ +K+ E + + ++S + V+ Sbjct: 6 AGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKE-----EQAKLAASSIDSIVNG 60
Query: 398 SPVGSEKSCAKSPFSLSLPASVEPLKAQIALPSSVMG 508 G E A S + A VE K + P+ V G Sbjct: 61 CDGGKEHIVAASGSTAVAVAQVE-AKTLVVQPTDVAG 96
>tr|A9NUS5|A9NUS5_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 162
Score = 68.2 bits (165), Expect = 3e-10 Identities = 31/66 (46%), Positives = 47/66 (71%) Frame = +2
Query: 179 MAQESWNCDTAEGSGCQQQEGLALCPNNCGFFGCAATMNLCSKCYRELTLKKQGSPSELS 358 MAQ++W D+ EG+G Q QE LC N+CGFFG ++TMN CSKC+++L LK+ S + + Sbjct: 1 MAQDNWKGDS-EGTGYQPQEDPILCANSCGFFGSSSTMNFCSKCFKDLVLKQALSAAVVE 59
Query: 359 IITSAS 376 I + ++ Sbjct: 60 ISSGSA 65
>tr|Q6R3I8|Q6R3I8_MAIZE Putative zinc finger protein ZmZf OS=Zea mays PE=2 SV=1 Length = 233
Score = 67.0 bits (162), Expect = 7e-10 Identities = 36/100 (36%), Positives = 52/100 (52%) Frame = +2
Query: 218 SGCQQQEGLALCPNNCGFFGCAATMNLCSKCYRELTLKKQGSPSELSIITSASATTPVHL 397 +GCQ EG LC NNCGFFG AATMN+CSKC++E+ K+ + S I S + + Sbjct: 65 AGCQAPEGPILCINNCGFFGSAATMNMCSKCHKEMITKQDQAKLAASSIDSIVDGSDAVM 124
Query: 398 SPVGSEKSCAKSPFSLSLPASVEPLKAQIALPSSVMGEIS 517 P G+ + + + L A +A P+ + IS Sbjct: 125 EPGGAGSNTVVAVAQVELQKKNVQQPADVAEPNEGVAAIS 164
>tr|Q3BCU2|Q3BCU2_MAIZE Zinc finger A20 and AN1 domains-containing protein OS=Zea mays GN=znf1 PE=2 SV=1 Length = 174
Score = 67.0 bits (162), Expect = 7e-10 Identities = 37/100 (37%), Positives = 52/100 (52%) Frame = +2
Query: 218 SGCQQQEGLALCPNNCGFFGCAATMNLCSKCYRELTLKKQGSPSELSIITSASATTPVHL 397 +GCQ EG LC NNCGFFG AATMN+CSKC++E+ K+ + S I S + + Sbjct: 6 AGCQAPEGPILCINNCGFFGSAATMNMCSKCHKEMITKQDQAKLAASSIDSIVNGSDAVM 65
Query: 398 SPVGSEKSCAKSPFSLSLPASVEPLKAQIALPSSVMGEIS 517 PV + + + + L A +A PS + IS Sbjct: 66 EPVVAGSNTVVAVAQVELQTMNVQQPADVAGPSEGVAAIS 105
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