BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946013|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0011_C21, 5'
         (207 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6ZPI3|LCOR_MOUSE Ligand-dependent corepressor OS=Mus musculu...    31   2.2  
sp|Q96JN0|LCOR_HUMAN Ligand-dependent corepressor OS=Homo sapien...    31   2.2  
sp|Q5VWT5|CA168_HUMAN Uncharacterized protein C1orf168 OS=Homo s...    29   8.4  

>sp|Q6ZPI3|LCOR_MOUSE Ligand-dependent corepressor OS=Mus musculus
           GN=Lcor PE=2 SV=2
          Length = 433

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 18/44 (40%), Positives = 23/44 (52%)
 Frame = -1

Query: 156 AIAKLSPSSHSHTCRQGENPHLGALETSGGGSSLDLAVRNRQSE 25
           ++ K SP + S T    +NP L  L  +   S LDL VR  QSE
Sbjct: 32  SLPKASPVTTSPTAATTQNPVLSKLLMADQDSPLDLTVRKSQSE 75


>sp|Q96JN0|LCOR_HUMAN Ligand-dependent corepressor OS=Homo sapiens
           GN=LCOR PE=1 SV=2
          Length = 433

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 18/44 (40%), Positives = 23/44 (52%)
 Frame = -1

Query: 156 AIAKLSPSSHSHTCRQGENPHLGALETSGGGSSLDLAVRNRQSE 25
           ++ K SP + S T    +NP L  L  +   S LDL VR  QSE
Sbjct: 32  SLPKASPVTTSPTAATTQNPVLSKLLMADQDSPLDLTVRKSQSE 75


>sp|Q5VWT5|CA168_HUMAN Uncharacterized protein C1orf168 OS=Homo
           sapiens GN=C1orf168 PE=2 SV=1
          Length = 728

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = +2

Query: 50  RSREDPPPEVSRAPRWGFSPCLQVCECEL 136
           +S E+PPPE S A     SPC  + ECEL
Sbjct: 223 KSWENPPPERSPAS----SPCQPIYECEL 247

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946013|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0011_C21, 5'
         (207 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q47TD2|Q47TD2_THEFY Citrate synthase OS=Thermobifida fusca (s...    35   1.4  

>tr|Q47TD2|Q47TD2_THEFY Citrate synthase OS=Thermobifida fusca
           (strain YX) GN=Tfu_0247 PE=3 SV=1
          Length = 401

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = +2

Query: 86  APRWGFSPCLQVCECELGDNLAMASCA 166
           APRWGF P L + E E  DN+A A+ A
Sbjct: 120 APRWGFKPLLDIDEAEARDNVARAASA 146