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DK946053
Clone id YMU02A01NGRL0011_E18
Library
Length 486
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0011_E18. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
AAATAATAACAAAAATGGCAAAAAAAACCAATCAAAATTATATTAATTCTAAATGGATTG
GTGGTTTTTTAACTAATTGGGAACATATGAAACATGAGAAACGCTTAAAATCTTCATCCA
CGCAGCACTCTAGCCCACGTCTATTAAAGATGCAAAGATATTTTGAGGGACTGACAACAC
GCCAAATTCCAGATGGTTTGGTTATATTGAATGCATGTAGAGATTTTTACGCTATATTTG
AAGCTAATCGATTACGAATACCTATTGTATCTTTGGTAGATTCTATTCTCCCAAAGGAAT
TACACAGATTAATTACTCATCCCATTCCGGTGAATAATGATTCTATATGGTTCACAAATC
TATTTTGCTCATTAGTCATAAAAACAGTCATTTATTCAAAAAATGCTCAAAACCTTAGCA
AAAAAAAGTTAAAGGAATTTACAAAAAAAATTCCATAGAAAAAAAAAAAAAAAAAAAAAA
AAAAAA
■■Homology search results ■■ -
sp_hit_id P26864
Definition sp|P26864|RT02_MARPO Ribosomal protein S2, mitochondrial OS=Marchantia polymorpha
Align length 149
Score (bit) 161.0
E-value 1.0e-39
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946053|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0011_E18, 5'
         (458 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P26864|RT02_MARPO Ribosomal protein S2, mitochondrial OS=Marc...   161   1e-39
sp|Q68XV5|RS2_RICTY 30S ribosomal protein S2 OS=Rickettsia typhi...    76   8e-14
sp|B0JTL2|RS2_MICAN 30S ribosomal protein S2 OS=Microcystis aeru...    75   1e-13
sp|Q3MBF3|RS2_ANAVT 30S ribosomal protein S2 OS=Anabaena variabi...    75   1e-13
sp|Q8YMY2|RS2_ANASP 30S ribosomal protein S2 OS=Anabaena sp. (st...    75   1e-13
sp|Q2RU09|RS2_RHORT 30S ribosomal protein S2 OS=Rhodospirillum r...    74   3e-13
sp|Q8UFM3|RS2_AGRT5 30S ribosomal protein S2 OS=Agrobacterium tu...    74   4e-13
sp|Q2GGV4|RS2_EHRCR 30S ribosomal protein S2 OS=Ehrlichia chaffe...    73   5e-13
sp|Q2GKU9|RS2_ANAPZ 30S ribosomal protein S2 OS=Anaplasma phagoc...    73   5e-13
sp|Q9ZE61|RS2_RICPR 30S ribosomal protein S2 OS=Rickettsia prowa...    73   7e-13
sp|A5GTG8|RS2_SYNR3 30S ribosomal protein S2 OS=Synechococcus sp...    72   9e-13
sp|Q5PAF6|RS2_ANAMM 30S ribosomal protein S2 OS=Anaplasma margin...    72   9e-13
sp|Q116Q2|RS2_TRIEI 30S ribosomal protein S2 OS=Trichodesmium er...    72   1e-12
sp|Q3AXI9|RS2_SYNS9 30S ribosomal protein S2 OS=Synechococcus sp...    71   2e-12
sp|Q7U795|RS2_SYNPX 30S ribosomal protein S2 OS=Synechococcus sp...    71   2e-12
sp|Q4UND8|RS2_RICFE 30S ribosomal protein S2 OS=Rickettsia felis...    71   2e-12
sp|Q5HB22|RS2_EHRRW 30S ribosomal protein S2 OS=Ehrlichia rumina...    71   2e-12
sp|Q5FGZ8|RS2_EHRRG 30S ribosomal protein S2 OS=Ehrlichia rumina...    71   2e-12
sp|Q3YRV2|RS2_EHRCJ 30S ribosomal protein S2 OS=Ehrlichia canis ...    71   2e-12
sp|P35014|RR2_GALSU 30S ribosomal protein S2, chloroplastic OS=G...    71   2e-12
sp|P74071|RS2_SYNY3 30S ribosomal protein S2 OS=Synechocystis sp...    71   3e-12
sp|Q3AKA5|RS2_SYNSC 30S ribosomal protein S2 OS=Synechococcus sp...    71   3e-12
sp|A5GLE0|RS2_SYNPW 30S ribosomal protein S2 OS=Synechococcus sp...    71   3e-12
sp|Q7VCB6|RS2_PROMA 30S ribosomal protein S2 OS=Prochlorococcus ...    71   3e-12
sp|Q46LH9|RS2_PROMT 30S ribosomal protein S2 OS=Prochlorococcus ...    70   3e-12
sp|A2C1I7|RS2_PROM1 30S ribosomal protein S2 OS=Prochlorococcus ...    70   3e-12
sp|Q11IJ8|RS2_MESSB 30S ribosomal protein S2 OS=Mesorhizobium sp...    70   3e-12
sp|Q2W4C3|RS2_MAGMM 30S ribosomal protein S2 OS=Magnetospirillum...    70   3e-12
sp|Q31BC4|RS2_PROM9 30S ribosomal protein S2 OS=Prochlorococcus ...    70   4e-12
sp|A5FZ67|RS2_ACICJ 30S ribosomal protein S2 OS=Acidiphilium cry...    70   4e-12

>sp|P26864|RT02_MARPO Ribosomal protein S2, mitochondrial
           OS=Marchantia polymorpha GN=RPS2 PE=3 SV=2
          Length = 237

 Score =  161 bits (408), Expect = 1e-39
 Identities = 83/149 (55%), Positives = 105/149 (70%), Gaps = 13/149 (8%)
 Frame = +3

Query: 3   IITKMAKKTNQNYINSKWIGGFLTNWEHMKHEKRLKSSSTQHSS-------------PRL 143
           II +MAKKTNQ+YIN KWIGGFLTNW+HMK  K+     + H +             PR 
Sbjct: 80  IIQQMAKKTNQSYINHKWIGGFLTNWKHMKKVKKHFQDFSAHPNLKDAFTSSPFDYFPRF 139

Query: 144 LKMQRYFEGLTTRQIPDGLVILNACRDFYAIFEANRLRIPIVSLVDSILPKELHRLITHP 323
            KMQ+ FEG+ T  IPD LVI+NA ++  AI EAN+L+IPIV+LVDS +P  LH+LIT+P
Sbjct: 140 KKMQKCFEGIMTHNIPDCLVIINANQNSMAILEANQLQIPIVALVDSNIPNRLHKLITYP 199

Query: 324 IPVNNDSIWFTNLFCSLVIKTVIYSKNAQ 410
           +PVN+DSI F  LFC+L+ KTVI SK +Q
Sbjct: 200 VPVNDDSIKFVYLFCNLITKTVILSKRSQ 228


>sp|Q68XV5|RS2_RICTY 30S ribosomal protein S2 OS=Rickettsia typhi
           GN=rpsB PE=3 SV=1
          Length = 295

 Score = 75.9 bits (185), Expect = 8e-14
 Identities = 51/142 (35%), Positives = 78/142 (54%), Gaps = 18/142 (12%)
 Frame = +3

Query: 3   IITKMAKKTNQNYINSKWIGGFLTNWEHM--------KHEKRLKSSSTQ--HSSPRLLKM 152
           II + A+K  Q Y+N++W+GG LTNW+ +        K EK L+S  T+  ++   +L M
Sbjct: 82  IIAEYAEKCGQYYVNNRWLGGMLTNWKTIACSIEKLEKLEKTLESEETRVCYTKKEILDM 141

Query: 153 QRYFEGL--------TTRQIPDGLVILNACRDFYAIFEANRLRIPIVSLVDSILPKELHR 308
            R  + L             PD LV+++  ++  AI EA +L IPIV++VD+    +   
Sbjct: 142 SRKKDKLLLSLAGIRNLNSKPDLLVVIDTNKEHIAINEAVKLNIPIVAVVDTNSNPD--- 198

Query: 309 LITHPIPVNNDSIWFTNLFCSL 374
            I +PIP N+DSI    L+CSL
Sbjct: 199 NINYPIPGNDDSIRSIRLYCSL 220


>sp|B0JTL2|RS2_MICAN 30S ribosomal protein S2 OS=Microcystis
           aeruginosa (strain NIES-843) GN=rpsB PE=3 SV=1
          Length = 265

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 45/147 (30%), Positives = 80/147 (54%), Gaps = 17/147 (11%)
 Frame = +3

Query: 3   IITKMAKKTNQNYINSKWIGGFLTNW-------EHMKHEKRLKSSSTQHSSPR------- 140
           II + A ++  +++N +W+GG LTNW       E +K  + L++S      P+       
Sbjct: 79  IIKQEALRSGSHFVNQRWLGGMLTNWETIRGRVERLKELEELENSGALDKRPKKEASVLR 138

Query: 141 --LLKMQRYFEGL-TTRQIPDGLVILNACRDFYAIFEANRLRIPIVSLVDSILPKELHRL 311
             L K+++Y  G+ T R++PD +V+++  R++ AI E  +L IPI+SL+D+    +   L
Sbjct: 139 RELGKLEKYLGGIKTMRRLPDLVVVVDQRREYNAIQECQKLGIPIISLLDTNCDPD---L 195

Query: 312 ITHPIPVNNDSIWFTNLFCSLVIKTVI 392
           +  PIP N+D+I    L    +   +I
Sbjct: 196 VDVPIPANDDAIRSVKLILGKISDAII 222


>sp|Q3MBF3|RS2_ANAVT 30S ribosomal protein S2 OS=Anabaena variabilis
           (strain ATCC 29413 / PCC 7937) GN=rpsB PE=3 SV=1
          Length = 265

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 46/153 (30%), Positives = 80/153 (52%), Gaps = 17/153 (11%)
 Frame = +3

Query: 3   IITKMAKKTNQNYINSKWIGGFLTNW-------EHMKHEKRLKSSSTQHSSPR------- 140
           II + A +   +YIN +W+GG LTNW       + +K  +R + S      P+       
Sbjct: 79  IIAQEAARCGSHYINQRWLGGMLTNWATIKTRVDRLKDLERREESGALDLLPKKEASMLR 138

Query: 141 --LLKMQRYFEGL-TTRQIPDGLVILNACRDFYAIFEANRLRIPIVSLVDSILPKELHRL 311
             L K+Q+Y  G+ T R++PD +VI++  R++ A+ E  +L IPIVS++D+    +   +
Sbjct: 139 RELAKLQKYLGGIKTMRKVPDVVVIVDQRREYNAVQECQKLSIPIVSMLDTNCDPD---V 195

Query: 312 ITHPIPVNNDSIWFTNLFCSLVIKTVIYSKNAQ 410
           +  PIP N+D+I    L    +   +   ++ Q
Sbjct: 196 VDIPIPANDDAIRSIKLIVGKLADAIYEGRHGQ 228


>sp|Q8YMY2|RS2_ANASP 30S ribosomal protein S2 OS=Anabaena sp.
           (strain PCC 7120) GN=rpsB PE=3 SV=1
          Length = 265

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 46/153 (30%), Positives = 80/153 (52%), Gaps = 17/153 (11%)
 Frame = +3

Query: 3   IITKMAKKTNQNYINSKWIGGFLTNW-------EHMKHEKRLKSSSTQHSSPR------- 140
           II + A +   +YIN +W+GG LTNW       + +K  +R + S      P+       
Sbjct: 79  IIAQEAARCGSHYINQRWLGGMLTNWATIKTRVDRLKDLERREESGALDLLPKKEASMLR 138

Query: 141 --LLKMQRYFEGL-TTRQIPDGLVILNACRDFYAIFEANRLRIPIVSLVDSILPKELHRL 311
             L K+Q+Y  G+ T R++PD +VI++  R++ A+ E  +L IPIVS++D+    +   +
Sbjct: 139 RELAKLQKYLGGIKTMRKVPDVVVIVDQRREYNAVQECQKLSIPIVSMLDTNCDPD---V 195

Query: 312 ITHPIPVNNDSIWFTNLFCSLVIKTVIYSKNAQ 410
           +  PIP N+D+I    L    +   +   ++ Q
Sbjct: 196 VDIPIPANDDAIRSIKLIVGKLADAIYEGRHGQ 228


>sp|Q2RU09|RS2_RHORT 30S ribosomal protein S2 OS=Rhodospirillum
           rubrum (strain ATCC 11170 / NCIB 8255) GN=rpsB PE=3 SV=1
          Length = 262

 Score = 73.9 bits (180), Expect = 3e-13
 Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 17/153 (11%)
 Frame = +3

Query: 3   IITKMAKKTNQNYINSKWIGGFLTNWEHMKHE-KRLKSSSTQHSSPRLLKMQRYFEGLTT 179
           ++ + A++  Q Y+N +W+GG LTNW+ + H  KRL+    +     LL + +  +    
Sbjct: 81  VVAEHARRCGQYYVNHRWLGGMLTNWKTISHSIKRLRDLEERFGGGDLLGLTKKEQLNLG 140

Query: 180 RQ----------------IPDGLVILNACRDFYAIFEANRLRIPIVSLVDSILPKELHRL 311
           R+                +PD L I++  ++  A+ EAN+L +P+V+++DS       R 
Sbjct: 141 REKDKLDMALGGIKEMGGLPDMLFIIDTVKESLAVNEANKLGLPVVAVIDS---NSDPRG 197

Query: 312 ITHPIPVNNDSIWFTNLFCSLVIKTVIYSKNAQ 410
           IT+PIP N+D+I     +C L+    I    AQ
Sbjct: 198 ITYPIPGNDDAIRAIQTYCELISGAAIDGIQAQ 230


>sp|Q8UFM3|RS2_AGRT5 30S ribosomal protein S2 OS=Agrobacterium
           tumefaciens (strain C58 / ATCC 33970) GN=rpsB PE=3 SV=1
          Length = 255

 Score = 73.6 bits (179), Expect = 4e-13
 Identities = 46/146 (31%), Positives = 78/146 (53%), Gaps = 16/146 (10%)
 Frame = +3

Query: 3   IITKMAKKTNQNYINSKWIGGFLTNWEHM--------KHEKRLKSSSTQHSSPRLLKMQR 158
           II   AK++ Q Y+NS+W+GG +TNW+ +        K ++ L S  + +S    L ++R
Sbjct: 81  IIADSAKRSAQYYVNSRWLGGMMTNWKTISNSIQRLRKVDEILNSEGSGYSKKERLTLER 140

Query: 159 YFEGLTTR--------QIPDGLVILNACRDFYAIFEANRLRIPIVSLVDSILPKELHRLI 314
             E L            +PD + I++  ++  AI EA RL IP+V+++DS    +    I
Sbjct: 141 EREKLEKALGGIRDMGGVPDLMFIIDTNKEKIAIEEAKRLGIPVVAIIDSNCDPD---HI 197

Query: 315 THPIPVNNDSIWFTNLFCSLVIKTVI 392
            +PIP N+D+    +L+C L+ +  I
Sbjct: 198 DYPIPGNDDASRAISLYCDLIARAAI 223


>sp|Q2GGV4|RS2_EHRCR 30S ribosomal protein S2 OS=Ehrlichia
           chaffeensis (strain Arkansas) GN=rpsB PE=3 SV=1
          Length = 288

 Score = 73.2 bits (178), Expect = 5e-13
 Identities = 44/146 (30%), Positives = 78/146 (53%), Gaps = 16/146 (10%)
 Frame = +3

Query: 3   IITKMAKKTNQNYINSKWIGGFLTNWEHM--------KHEKRLKSSSTQHSSPRLL---- 146
           II   A +  Q YIN++W+GG LTNWE +        ++EK +++   Q +   LL    
Sbjct: 82  IIADEAVRCGQYYINNRWLGGMLTNWETISLSIKKLKEYEKLIENVDNQFTKKELLLFEK 141

Query: 147 ---KMQRYFEGLTTR-QIPDGLVILNACRDFYAIFEANRLRIPIVSLVDSILPKELHRLI 314
              K+ R   G+     +P  L +++  ++  AI EAN+L IP+++++D+         I
Sbjct: 142 KRAKLDRSIGGICNMGGLPHALFVIDTNKEHIAIKEANKLNIPVIAVLDT---NSDPAGI 198

Query: 315 THPIPVNNDSIWFTNLFCSLVIKTVI 392
            +PIP N+D++   + FC +V  T++
Sbjct: 199 DYPIPGNDDAVRSIDFFCKIVSDTIL 224


>sp|Q2GKU9|RS2_ANAPZ 30S ribosomal protein S2 OS=Anaplasma
           phagocytophilum (strain HZ) GN=rpsB PE=3 SV=1
          Length = 296

 Score = 73.2 bits (178), Expect = 5e-13
 Identities = 45/146 (30%), Positives = 77/146 (52%), Gaps = 16/146 (10%)
 Frame = +3

Query: 3   IITKMAKKTNQNYINSKWIGGFLTNWEH--------MKHEKRLKSSSTQHSSPRLL---- 146
           +I + A +  Q Y+N +W+GG LTNWE         +  EK L  +  + +   LL    
Sbjct: 84  VIAEEAARCGQYYVNHRWLGGMLTNWETVSSSIRRLLDFEKLLNDTDAKFTKKELLMFDK 143

Query: 147 ---KMQRYFEGLTTR-QIPDGLVILNACRDFYAIFEANRLRIPIVSLVDSILPKELHRLI 314
              K++R   G+     +P  L +++  ++  AI EAN+L+IP+V+++D+       R +
Sbjct: 144 KREKLERSLGGIREMGGLPHILFVIDTNKEHIAIQEANKLKIPVVAVLDT---NSDPRGV 200

Query: 315 THPIPVNNDSIWFTNLFCSLVIKTVI 392
            +PIP N+DSI   + FC  V  T++
Sbjct: 201 DYPIPGNDDSIRSIDFFCRAVSNTIL 226


>sp|Q9ZE61|RS2_RICPR 30S ribosomal protein S2 OS=Rickettsia
           prowazekii GN=rpsB PE=3 SV=1
          Length = 296

 Score = 72.8 bits (177), Expect = 7e-13
 Identities = 48/142 (33%), Positives = 77/142 (54%), Gaps = 18/142 (12%)
 Frame = +3

Query: 3   IITKMAKKTNQNYINSKWIGGFLTNWEHM--------KHEKRLKSSSTQ--HSSPRLLKM 152
           II + A+K  Q Y+N++W+GG LTNW+ +        K EK L+S   +  ++   +L M
Sbjct: 82  IIAEYAEKCGQYYVNNRWLGGMLTNWKTIACSIEKLEKLEKTLESEEARICYTKKEILDM 141

Query: 153 QRYFEGL--------TTRQIPDGLVILNACRDFYAIFEANRLRIPIVSLVDSILPKELHR 308
            R  + L             PD LV+++  ++  AI EA +L IP+V++VD+    +   
Sbjct: 142 SRKKDKLLLSLAGIRNLNSKPDLLVVIDTNKEHIAINEAVKLNIPVVAVVDTNSNPD--- 198

Query: 309 LITHPIPVNNDSIWFTNLFCSL 374
            + +PIP N+DSI    L+CSL
Sbjct: 199 NVDYPIPGNDDSIRSIRLYCSL 220
tr_hit_id Q1XGC8
Definition tr|Q1XGC8|Q1XGC8_PHYPA Ribosomal protein S2 OS=Physcomitrella patens
Align length 152
Score (bit) 150.0
E-value 2.0e-35
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946053|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0011_E18, 5'
         (458 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q1XGC8|Q1XGC8_PHYPA Ribosomal protein S2 OS=Physcomitrella pa...   150   2e-35
tr|Q7YAL1|Q7YAL1_CHAVU Ribosomal protein S2 OS=Chara vulgaris GN...   134   3e-30
tr|Q8M1D9|Q8M1D9_CHAGL Ribosomal protein S2 OS=Chaetosphaeridium...    94   3e-18
tr|A6YEB6|A6YEB6_CHLAT Ribosomal protein S2 OS=Chlorokybus atmop...    86   7e-16
tr|Q9TCC3|Q9TCC3_NEPOL Ribosomal protein S2 OS=Nephroselmis oliv...    80   5e-14
tr|O21288|O21288_RECAM Ribosomal protein S2 OS=Reclinomonas amer...    75   1e-12
tr|B7K736|B7K736_9CHRO Ribosomal protein S2 OS=Cyanothece sp. PC...    75   2e-12
tr|A8YBB2|A8YBB2_MICAE Similar to tr|Q4C4K9|Q4C4K9_CROWT Ribosom...    75   2e-12
tr|B1WQZ8|B1WQZ8_CYAA5 30S ribosomal protein S2 OS=Cyanothece (s...    74   3e-12
tr|Q4C4K9|Q4C4K9_CROWT Ribosomal protein S2, bacterial and organ...    74   3e-12
tr|A3IN58|A3IN58_9CHRO 30S ribosomal protein S2 OS=Cyanothece sp...    74   3e-12
tr|Q8HCP8|Q8HCP8_ORYSJ Ribosomal protein S2 OS=Oryza sativa subs...    74   3e-12
tr|B1XQQ1|B1XQQ1_SYNP2 30S ribosomal protein S2 OS=Synechococcus...    74   4e-12
tr|Q847M7|Q847M7_RHORU Putative ribosomal protein S2 OS=Rhodospi...    74   4e-12
tr|B7K4S8|B7K4S8_SYNP8 Ribosomal protein S2 OS=Synechococcus sp....    74   4e-12
tr|B4BYG5|B4BYG5_9CHRO Ribosomal protein S2 OS=Cyanothece sp. PC...    74   4e-12
tr|B2J6U9|B2J6U9_NOSP7 Ribosomal protein S2 OS=Nostoc punctiform...    74   5e-12
tr|Q9MH58|Q9MH58_ZAMFL Mitochondrial protein (Fragment) OS=Zamia...    74   5e-12
tr|Q40J38|Q40J38_EHRCH Ribosomal protein S2, bacterial and organ...    73   6e-12
tr|B6BPW4|B6BPW4_9RICK Ribosomal protein S2 OS=Candidatus Pelagi...    73   6e-12
tr|B4WM95|B4WM95_9SYNE Ribosomal protein S2 OS=Synechococcus sp....    73   6e-12
tr|Q4FM69|Q4FM69_PELUB Probable 30S ribosomal protein S2 OS=Pela...    72   1e-11
tr|B6ISV1|B6ISV1_RHOCS Ribosomal protein S2 OS=Rhodospirillum ce...    72   1e-11
tr|B5YEG9|B5YEG9_DICT6 Ribosomal protein S2 OS=Dictyoglomus ther...    72   1e-11
tr|Q1V2V1|Q1V2V1_9RICK Probable 30S ribosomal protein S2 OS=Cand...    72   1e-11
tr|B4VWE3|B4VWE3_9CYAN Ribosomal protein S2 OS=Microcoleus chtho...    72   1e-11
tr|Q066M0|Q066M0_9SYNE 30S ribosomal protein S2 OS=Synechococcus...    71   2e-11
tr|Q05TE2|Q05TE2_9SYNE 30S ribosomal protein S2 OS=Synechococcus...    71   2e-11
tr|A3Z782|A3Z782_9SYNE 30S ribosomal protein S2 OS=Synechococcus...    71   2e-11
tr|Q60HB3|Q60HB3_HORVD Ribosomal protein S2 OS=Hordeum vulgare v...    71   2e-11

>tr|Q1XGC8|Q1XGC8_PHYPA Ribosomal protein S2 OS=Physcomitrella
           patens GN=rps2 PE=3 SV=1
          Length = 241

 Score =  150 bits (380), Expect = 2e-35
 Identities = 81/152 (53%), Positives = 105/152 (69%), Gaps = 13/152 (8%)
 Frame = +3

Query: 3   IITKMAKKTNQNYINSKWIGGFLTNWEHMKHEKRLKSSSTQHSS-------------PRL 143
           I+ +MAKKTNQ+YIN KWIGGFLTN +HMK+ ++   + + HS              P  
Sbjct: 80  IVQQMAKKTNQSYINHKWIGGFLTNRKHMKNVQKHFQNFSAHSKLKDASTSSPFDFFPHF 139

Query: 144 LKMQRYFEGLTTRQIPDGLVILNACRDFYAIFEANRLRIPIVSLVDSILPKELHRLITHP 323
            KMQ+ FEG+ T  IPD LVI+NA ++  AI EAN+L+IPIVSLVDS +   L +LIT+P
Sbjct: 140 RKMQKCFEGIMTHDIPDCLVIINANKNSMAILEANQLQIPIVSLVDSNISNRLQKLITYP 199

Query: 324 IPVNNDSIWFTNLFCSLVIKTVIYSKNAQNLS 419
           IPVN+DSI F  LFC+L+ KTVI S++A  LS
Sbjct: 200 IPVNDDSIQFVYLFCNLITKTVILSQSAWPLS 231


>tr|Q7YAL1|Q7YAL1_CHAVU Ribosomal protein S2 OS=Chara vulgaris
           GN=rps2 PE=3 SV=1
          Length = 225

 Score =  134 bits (336), Expect = 3e-30
 Identities = 74/145 (51%), Positives = 98/145 (67%), Gaps = 12/145 (8%)
 Frame = +3

Query: 3   IITKMAKKTNQNYINSKWIGGFLTNWEHMKHEKR---------LKSSST-QH--SSPRLL 146
           II KMAK+T Q+YIN KWIGGFLTNW+H+ H +          LK+  T QH    PR  
Sbjct: 79  IIQKMAKETCQSYINHKWIGGFLTNWKHIFHVQAHFQHFENLSLKALDTAQHIRKVPRYK 138

Query: 147 KMQRYFEGLTTRQIPDGLVILNACRDFYAIFEANRLRIPIVSLVDSILPKELHRLITHPI 326
           KM++ FEG+ T  IPD LVI+NA ++  AI EA++L IPIV L+DS +P +L + I +PI
Sbjct: 139 KMKKCFEGIVTNDIPDCLVIMNANQNSMAILEASQLHIPIVCLIDSDIPSKLQQRIHYPI 198

Query: 327 PVNNDSIWFTNLFCSLVIKTVIYSK 401
           PVN+DS+ F  LFC L+ + V YS+
Sbjct: 199 PVNDDSLEFIYLFCHLITQIVNYSR 223


>tr|Q8M1D9|Q8M1D9_CHAGL Ribosomal protein S2 OS=Chaetosphaeridium
           globosum GN=rps2 PE=3 SV=1
          Length = 191

 Score = 94.0 bits (232), Expect = 3e-18
 Identities = 52/127 (40%), Positives = 72/127 (56%)
 Frame = +3

Query: 3   IITKMAKKTNQNYINSKWIGGFLTNWEHMKHEKRLKSSSTQHSSPRLLKMQRYFEGLTTR 182
           II + A KTNQ++I +KWIGG LTNW+H+ +   L                         
Sbjct: 85  IIKETALKTNQSFITTKWIGGLLTNWKHISYYNHLSYDR--------------------- 123

Query: 183 QIPDGLVILNACRDFYAIFEANRLRIPIVSLVDSILPKELHRLITHPIPVNNDSIWFTNL 362
             P  L++ N C +F AI EAN L IP+VSL++S +P   H  I +PIPVN++SI F  L
Sbjct: 124 --PSCLIVFNPCLNFTAIQEANTLGIPVVSLMNSNVPN--HLKIDYPIPVNHNSISFIYL 179

Query: 363 FCSLVIK 383
           FC+L++K
Sbjct: 180 FCNLIVK 186


>tr|A6YEB6|A6YEB6_CHLAT Ribosomal protein S2 OS=Chlorokybus
           atmophyticus GN=rps2 PE=4 SV=1
          Length = 442

 Score = 86.3 bits (212), Expect = 7e-16
 Identities = 54/140 (38%), Positives = 81/140 (57%), Gaps = 11/140 (7%)
 Frame = +3

Query: 3   IITKMAKKTNQNYINSKWIGGFLTNWEHM--------KHEKRLKSSSTQH--SSPRLLKM 152
           I+   AK T+Q+Y+N+KW+GG LTNW+ +        K E   KS   +   S  R  KM
Sbjct: 294 IVRLAAKLTDQSYLNNKWLGGLLTNWKEINLSLGLFQKFEDLYKSFLIRKNISFSRYKKM 353

Query: 153 QRYFEGLTT-RQIPDGLVILNACRDFYAIFEANRLRIPIVSLVDSILPKELHRLITHPIP 329
           ++ FEG++  ++ P+ ++ LN  ++   I EA  L IPI++LVDS  P  L   IT+PIP
Sbjct: 354 KKSFEGISPLKKRPNLIIFLNPNQNEIPIREAFNLNIPIIALVDSNTPPRLLSQITYPIP 413

Query: 330 VNNDSIWFTNLFCSLVIKTV 389
               S+ F   F +LV+KT+
Sbjct: 414 GAQTSLPFIYFFLNLVVKTI 433


>tr|Q9TCC3|Q9TCC3_NEPOL Ribosomal protein S2 OS=Nephroselmis
           olivacea GN=rps2 PE=3 SV=1
          Length = 235

 Score = 80.1 bits (196), Expect = 5e-14
 Identities = 51/145 (35%), Positives = 80/145 (55%), Gaps = 11/145 (7%)
 Frame = +3

Query: 3   IITKMAKKTNQNYINSKWIGGFLTNWEHMKHE----------KRLKSSSTQHSSPRLLKM 152
           ++ K  + T Q+Y+N++W+GG LTNW  +  E            L +S    S+PR  KM
Sbjct: 89  LLQKTCELTEQSYVNNRWVGGTLTNWPIISKEIETYKKVVTQLHLYTSLFYVSTPRYEKM 148

Query: 153 QRYFEGLTTR-QIPDGLVILNACRDFYAIFEANRLRIPIVSLVDSILPKELHRLITHPIP 329
           ++ F+G  T    PD L++LN  ++  AI EA  L IP++++VDS     L + IT+PIP
Sbjct: 149 KKSFQGFQTPISKPDLLIVLNPSKNKEAINEAWVLNIPVIAIVDS--DTNLSK-ITYPIP 205

Query: 330 VNNDSIWFTNLFCSLVIKTVIYSKN 404
            NN S  F     ++++KT+    N
Sbjct: 206 GNNSSYEFIYYCLNIIVKTITNKYN 230


>tr|O21288|O21288_RECAM Ribosomal protein S2 OS=Reclinomonas
           americana GN=rps2 PE=4 SV=1
          Length = 212

 Score = 75.5 bits (184), Expect = 1e-12
 Identities = 47/135 (34%), Positives = 75/135 (55%), Gaps = 5/135 (3%)
 Frame = +3

Query: 3   IITKMAKKTNQNYINSKWIGGFLTNWEHMKHEKRLKSSSTQ---HSSPRLLKMQRYFEGL 173
           I+ + AKK  Q Y+N +WIGG LTN+ H+K + R     ++    S+  +  M+R     
Sbjct: 84  IVEENAKKCGQPYVNRRWIGGLLTNFTHIKKKLRNPKGCSEKFIFSTQGIRNMER----- 138

Query: 174 TTRQIPDGLVI--LNACRDFYAIFEANRLRIPIVSLVDSILPKELHRLITHPIPVNNDSI 347
               +P  + I  +N CR   A+ EA++L IP +++VDS       + IT+PIP N+DSI
Sbjct: 139 ----LPSAIFIVGVNNCRT--ALLEASKLNIPTIAIVDS---NTSIQDITYPIPGNDDSI 189

Query: 348 WFTNLFCSLVIKTVI 392
              NL+C L+   ++
Sbjct: 190 LAVNLYCQLISNAIL 204


>tr|B7K736|B7K736_9CHRO Ribosomal protein S2 OS=Cyanothece sp. PCC
           7424 GN=PCC7424_1153 PE=4 SV=1
          Length = 269

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 43/132 (32%), Positives = 73/132 (55%), Gaps = 17/132 (12%)
 Frame = +3

Query: 3   IITKMAKKTNQNYINSKWIGGFLTNW-------EHMKHEKRLKSSSTQHSSPR------- 140
           II + A +   NY+N +W+GG LTNW       E +K  + ++ S      P+       
Sbjct: 79  IIAQEALRCGSNYVNQRWLGGMLTNWETIRTRAERLKELEEMEESGALARRPKKEAAVLR 138

Query: 141 --LLKMQRYFEGL-TTRQIPDGLVILNACRDFYAIFEANRLRIPIVSLVDSILPKELHRL 311
             + K+Q+Y  G+ T R+IPD ++I++  R++ A+ E  +L IPIV+L+D+    +    
Sbjct: 139 REMYKLQKYLGGIKTMRRIPDVVIIIDLKREYNAVQECQKLGIPIVALLDTNCDPD---Y 195

Query: 312 ITHPIPVNNDSI 347
           +  PIP N+D+I
Sbjct: 196 VDVPIPANDDAI 207


>tr|A8YBB2|A8YBB2_MICAE Similar to tr|Q4C4K9|Q4C4K9_CROWT Ribosomal
           protein S2 OS=Microcystis aeruginosa PCC 7806
           GN=IPF_2513 PE=3 SV=1
          Length = 265

 Score = 74.7 bits (182), Expect = 2e-12
 Identities = 44/147 (29%), Positives = 80/147 (54%), Gaps = 17/147 (11%)
 Frame = +3

Query: 3   IITKMAKKTNQNYINSKWIGGFLTNW-------EHMKHEKRLKSSSTQHSSPR------- 140
           II + A ++  +++N +W+GG LTNW       E +K  + L++S      P+       
Sbjct: 79  IIKQEALRSGSHFVNQRWLGGMLTNWETIRGRVERLKELEELENSGALDKRPKKEASVLR 138

Query: 141 --LLKMQRYFEGL-TTRQIPDGLVILNACRDFYAIFEANRLRIPIVSLVDSILPKELHRL 311
             L K+++Y  G+ T R++PD +++++  R++ AI E  +L IPI+SL+D+    +   L
Sbjct: 139 RELGKLEKYLGGIKTMRRLPDLVIVVDQRREYNAIQECQKLGIPIISLLDTNCDPD---L 195

Query: 312 ITHPIPVNNDSIWFTNLFCSLVIKTVI 392
           +  PIP N+D+I    L    +   +I
Sbjct: 196 VDVPIPANDDAIRSVKLILGKISDAII 222


>tr|B1WQZ8|B1WQZ8_CYAA5 30S ribosomal protein S2 OS=Cyanothece
           (strain ATCC 51142) GN=rps2 PE=4 SV=1
          Length = 269

 Score = 74.3 bits (181), Expect = 3e-12
 Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 17/153 (11%)
 Frame = +3

Query: 3   IITKMAKKTNQNYINSKWIGGFLTNWEHMK-HEKRLKSSSTQHSSPRLL----------- 146
           II + A +   NY+N +W+GG LTNWE +K   +RLK       S ++            
Sbjct: 79  IIAQEASRCGANYVNQRWLGGMLTNWETIKTRVERLKELEAMEESGQIARRPKKEASVLR 138

Query: 147 ----KMQRYFEGL-TTRQIPDGLVILNACRDFYAIFEANRLRIPIVSLVDSILPKELHRL 311
               K+Q+Y  G+ T R+ PD +VI++  R++ AI E  +L IP++SL+D+    +   +
Sbjct: 139 RELGKLQKYLGGIKTMRRPPDVVVIVDQRREYNAIQECQKLGIPMISLLDTNCDPDYADI 198

Query: 312 ITHPIPVNNDSIWFTNLFCSLVIKTVIYSKNAQ 410
              PIP N+D+I    L    +   +   ++ Q
Sbjct: 199 ---PIPANDDAIRSIKLILGKLADAIYEGRHGQ 228


>tr|Q4C4K9|Q4C4K9_CROWT Ribosomal protein S2, bacterial and
           organelle form OS=Crocosphaera watsonii
           GN=CwatDRAFT_4199 PE=3 SV=1
          Length = 269

 Score = 74.3 bits (181), Expect = 3e-12
 Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 17/153 (11%)
 Frame = +3

Query: 3   IITKMAKKTNQNYINSKWIGGFLTNWEHMK-HEKRLKSSSTQHSSPRLL----------- 146
           II + A +   NY+N +W+GG LTNWE +K   +RLK       S ++            
Sbjct: 79  IIAQEASRCGANYVNQRWLGGMLTNWETIKTRVERLKELEAMEDSGQIARRPKKEASVLR 138

Query: 147 ----KMQRYFEGL-TTRQIPDGLVILNACRDFYAIFEANRLRIPIVSLVDSILPKELHRL 311
               K+Q+Y  G+ T R+ PD +VI++  R++ AI E  +L IP++SL+D+    +   +
Sbjct: 139 RELGKLQKYLGGIKTMRRPPDVVVIVDQRREYNAIQECQKLGIPMISLLDTNCDPDYADI 198

Query: 312 ITHPIPVNNDSIWFTNLFCSLVIKTVIYSKNAQ 410
              PIP N+D+I    L    +   +   ++ Q
Sbjct: 199 ---PIPANDDAIRSIKLILGRLADAIYEGRHGQ 228