DK946064 |
Clone id |
YMU02A01NGRL0011_F08 |
Library |
YMU02 |
Length |
527 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0011_F08. 5' end sequence. |
Accession |
DK946064 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL21Contig1 |
Sequence |
CTTCAAAACCAGCAGCTCGTTCACAAGCACCGTCATACACACACATACAGGCCTCTAACA CCCGCAGTGCAGGCCAGAGCTCCTCTGTCTTCTCCATCTCTCCTTTTTGAATCGTGCAGG AATGGCTAGCAATGGAGTTGTGACTGTCTATGGCAATGGTGCCATCTCTGATCCCAAGAA GTCATCTTATGCAGTCAAGGTGGGTCTTGCTCAGATGCTCCGAGGAGGTGTTATTATGGA TGTTGTGAATGCAGAGCAGGCTCGAATTGCGGAAGAGGCAGGCGCTACTGCCGTAATGGC CCTCGAACGTGTGCCTGCGGACATCAGGGCTGAGGGTGGTGTTGCTCGCATGAGTGATCC TGGTTTGATCAAGGAGATCAAGAATGCTGTCACTATTCCTGTGATGGCCAAAGCCAGAAT TGGGCATTTTGTGGAAGCGCAGGTACTTGAGGCCATTGGTGTGGATTACATTGATGAGAG TGAGGTCCTTACCCCAGCGGATGATGTGAACCACATCAACAAGCACA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9AT63 |
Definition |
sp|Q9AT63|PDX1_GINBI Probable pyridoxal biosynthesis protein PDX1 OS=Ginkgo biloba |
Align length |
135 |
Score (bit) |
242.0 |
E-value |
7.0e-64 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q45FF0 |
Definition |
tr|Q45FF0|Q45FF0_SOYBN Pyridoxine biosynthesis protein OS=Glycine max |
Align length |
134 |
Score (bit) |
223.0 |
E-value |
4.0e-57 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK946064|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0011_F08, 5' (527 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q45FF0|Q45FF0_SOYBN Pyridoxine biosynthesis protein OS=Glycin... 223 4e-57 tr|Q6QND3|Q6QND3_TOBAC Putative pyridoxine biosynthesis protein ... 223 6e-57 tr|Q45FF1|Q45FF1_LOTJA Pyridoxine biosynthesis protein OS=Lotus ... 221 1e-56 tr|A9TIQ8|A9TIQ8_PHYPA Predicted protein OS=Physcomitrella paten... 219 5e-56 tr|A9S7G3|A9S7G3_PHYPA Predicted protein OS=Physcomitrella paten... 217 3e-55 tr|Q45FF2|Q45FF2_MEDTR Pyridoxine biosynthesis protein OS=Medica... 215 1e-54 tr|B6SJQ3|B6SJQ3_MAIZE Putative uncharacterized protein OS=Zea m... 214 2e-54 tr|B4FRZ2|B4FRZ2_MAIZE Putative uncharacterized protein OS=Zea m... 212 8e-54 tr|B4FQA2|B4FQA2_MAIZE Putative uncharacterized protein OS=Zea m... 212 8e-54 tr|A9RLD0|A9RLD0_PHYPA Predicted protein OS=Physcomitrella paten... 211 2e-53 tr|Q53NW9|Q53NW9_ORYSJ Os11g0708500 protein OS=Oryza sativa subs... 210 4e-53 tr|A9TWQ5|A9TWQ5_PHYPA Predicted protein OS=Physcomitrella paten... 210 4e-53 tr|B7E5L2|B7E5L2_ORYSJ cDNA clone:006-203-B11, full insert seque... 208 1e-52 tr|A2YH94|A2YH94_ORYSI Putative uncharacterized protein OS=Oryza... 208 1e-52 tr|Q3S861|Q3S861_WHEAT Pyridoxine biosynthesis protein OS=Tritic... 206 4e-52 tr|A4RTQ1|A4RTQ1_OSTLU Predicted protein OS=Ostreococcus lucimar... 201 2e-50 tr|B7E4V8|B7E4V8_ORYSJ cDNA clone:001-007-G11, full insert seque... 200 4e-50 tr|Q4WUD7|Q4WUD7_ASPFU Pyridoxine biosynthesis protein OS=Asperg... 199 7e-50 tr|B0Y3W1|B0Y3W1_ASPFC Pyridoxine biosynthesis protein OS=Asperg... 199 7e-50 tr|A1DF23|A1DF23_NEOFI Pyridoxine biosynthesis protein OS=Neosar... 199 7e-50 tr|A1CAP7|A1CAP7_ASPCL Pyridoxine biosynthesis protein OS=Asperg... 196 5e-49 tr|Q0CDB7|Q0CDB7_ASPTN Pyridoxine biosynthesis protein PDX1 OS=A... 196 6e-49 tr|A2QGS0|A2QGS0_ASPNC Contig An03c0120, complete genome OS=Aspe... 196 6e-49 tr|Q2U7S1|Q2U7S1_ASPOR Stationary phase-induced protein OS=Asper... 196 8e-49 tr|B8NEJ0|B8NEJ0_ASPFL Pyridoxine biosynthesis protein OS=Asperg... 196 8e-49 tr|Q1DU32|Q1DU32_COCIM Putative uncharacterized protein OS=Cocci... 194 2e-48 tr|B6HQD1|B6HQD1_PENCH Pc22g15930 protein OS=Penicillium chrysog... 194 2e-48 tr|B8G663|B8G663_9CHLR Pyridoxine biosynthesis protein OS=Chloro... 193 5e-48 tr|B2QH76|B2QH76_9CHLR Pyridoxine biosynthesis protein OS=Chloro... 193 5e-48 tr|B0D3U2|B0D3U2_LACBS Predicted protein OS=Laccaria bicolor (st... 192 7e-48
>tr|Q45FF0|Q45FF0_SOYBN Pyridoxine biosynthesis protein OS=Glycine max PE=2 SV=1 Length = 311
Score = 223 bits (569), Expect = 4e-57 Identities = 113/134 (84%), Positives = 125/134 (93%) Frame = +2
Query: 125 ASNGVVTVYGNGAISDPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATAVMAL 304 + +GVVTVYGNGAI++ KKS ++VKVGLAQMLRGGVIMDVV+AEQARIAEEAGA AVMAL Sbjct: 4 SGSGVVTVYGNGAITETKKSPFSVKVGLAQMLRGGVIMDVVDAEQARIAEEAGACAVMAL 63
Query: 305 ERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDYIDESE 484 ERVPADIRA+GGVARMSDP LI +IK AVTIPVMAKARIGHFVEAQ+LEAIG+DY+DESE Sbjct: 64 ERVPADIRAQGGVARMSDPQLINDIKRAVTIPVMAKARIGHFVEAQILEAIGIDYVDESE 123
Query: 485 VLTPADDVNHINKH 526 VLT ADD NHINKH Sbjct: 124 VLTLADDANHINKH 137
>tr|Q6QND3|Q6QND3_TOBAC Putative pyridoxine biosynthesis protein isoform B (Putative pyridoxine biosynthesis protein isoform A) OS=Nicotiana tabacum GN=Pdx1-B PE=4 SV=1 Length = 309
Score = 223 bits (567), Expect = 6e-57 Identities = 115/136 (84%), Positives = 127/136 (93%), Gaps = 1/136 (0%) Frame = +2
Query: 122 MASNGVVTVYGNGAISDP-KKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATAVM 298 MA +GVVT+YGNGA+++ K+S ++VKVGLAQMLRGGVIMDVVNAEQARIAEEAGA AVM Sbjct: 1 MAGSGVVTLYGNGALTETTKQSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVM 60
Query: 299 ALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDYIDE 478 ALERVPADIRA+GGVARMSDP LIKEIK AVTIPVMAKARIGHFVEAQ+LEAIG+DY+DE Sbjct: 61 ALERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDE 120
Query: 479 SEVLTPADDVNHINKH 526 SEVLT ADD NHINKH Sbjct: 121 SEVLTLADDENHINKH 136
>tr|Q45FF1|Q45FF1_LOTJA Pyridoxine biosynthesis protein OS=Lotus japonicus PE=2 SV=1 Length = 310
Score = 221 bits (564), Expect = 1e-56 Identities = 116/136 (85%), Positives = 126/136 (92%), Gaps = 1/136 (0%) Frame = +2
Query: 122 MASNGVVTVYGNGA-ISDPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATAVM 298 M +GVVTVYGNGA I++ KKS ++VKVGLAQMLRGGVIMDVVNA+QARIAEEAGA AVM Sbjct: 1 MEGSGVVTVYGNGAAITETKKSPFSVKVGLAQMLRGGVIMDVVNAQQARIAEEAGACAVM 60
Query: 299 ALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDYIDE 478 ALERVPADIRA+GGVARMSDP LIKEIK AVTIPVMAKARIGHFVEAQ+LEAIGVDY+DE Sbjct: 61 ALERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGVDYVDE 120
Query: 479 SEVLTPADDVNHINKH 526 SEVLT AD+ NHINKH Sbjct: 121 SEVLTLADEDNHINKH 136
>tr|A9TIQ8|A9TIQ8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_170297 PE=4 SV=1 Length = 315
Score = 219 bits (559), Expect = 5e-56 Identities = 119/141 (84%), Positives = 126/141 (89%), Gaps = 6/141 (4%) Frame = +2
Query: 122 MASNGVVTVY---GNGAI--SDPKKS-SYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAG 283 M NGVV +Y GNG + ++ KKS SYAVKVGLAQMLRGGVIMDVV+A QARIAEEAG Sbjct: 1 MEGNGVVAIYRNNGNGLLENNNSKKSVSYAVKVGLAQMLRGGVIMDVVDANQARIAEEAG 60
Query: 284 ATAVMALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGV 463 A AVMALERVPADIRAEGGVARMSDP +IKEIK AVTIPVMAKARIGHFVEAQ+LEAIGV Sbjct: 61 AVAVMALERVPADIRAEGGVARMSDPAMIKEIKKAVTIPVMAKARIGHFVEAQILEAIGV 120
Query: 464 DYIDESEVLTPADDVNHINKH 526 DYIDESEVLTPADDVNHINKH Sbjct: 121 DYIDESEVLTPADDVNHINKH 141
>tr|A9S7G3|A9S7G3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_181982 PE=4 SV=1 Length = 314
Score = 217 bits (552), Expect = 3e-55 Identities = 116/140 (82%), Positives = 120/140 (85%), Gaps = 5/140 (3%) Frame = +2
Query: 122 MASNGVVTVYGNGAIS-----DPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGA 286 M NGVV VY N + K SYAVKVGLAQMLRGGVIMDVV+A QARIAEEAGA Sbjct: 1 MEGNGVVAVYHNNGSGLSENQNKKTVSYAVKVGLAQMLRGGVIMDVVDAAQARIAEEAGA 60
Query: 287 TAVMALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVD 466 AVMALERVPADIRAEGGVARMSDP +IKEIK AVTIPVMAKARIGHFVEAQ+LEAIGVD Sbjct: 61 VAVMALERVPADIRAEGGVARMSDPSMIKEIKKAVTIPVMAKARIGHFVEAQILEAIGVD 120
Query: 467 YIDESEVLTPADDVNHINKH 526 YIDESEVLTPADDVNHINKH Sbjct: 121 YIDESEVLTPADDVNHINKH 140
>tr|Q45FF2|Q45FF2_MEDTR Pyridoxine biosynthesis protein OS=Medicago truncatula PE=2 SV=1 Length = 314
Score = 215 bits (548), Expect = 1e-54 Identities = 112/140 (80%), Positives = 125/140 (89%), Gaps = 5/140 (3%) Frame = +2
Query: 122 MASNGVVTVYGNGAISDP-----KKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGA 286 M +GVVTVYGNGA+++ K S ++VKVGLAQMLRGGVIMDVVNAEQARIAEEAGA Sbjct: 1 MEGSGVVTVYGNGALTETTSTTTKSSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGA 60
Query: 287 TAVMALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVD 466 AVMALERVPADIRA+GGVARMSDP LIKEIK AVTIPVMAKARIGHFVEAQ+LE++G+D Sbjct: 61 CAVMALERVPADIRAQGGVARMSDPQLIKEIKAAVTIPVMAKARIGHFVEAQILESLGID 120
Query: 467 YIDESEVLTPADDVNHINKH 526 Y+DESEVLT AD+ NHINKH Sbjct: 121 YVDESEVLTLADEDNHINKH 140
>tr|B6SJQ3|B6SJQ3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 317
Score = 214 bits (546), Expect = 2e-54 Identities = 109/138 (78%), Positives = 122/138 (88%), Gaps = 6/138 (4%) Frame = +2
Query: 131 NGVVTVYGNGAIS------DPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATA 292 +GVVTVYGN + PK S+++VKVGLAQMLRGGVIMDVV EQAR+AEEAGA A Sbjct: 6 SGVVTVYGNNGAALLEPPKQPKSSTFSVKVGLAQMLRGGVIMDVVTPEQARLAEEAGACA 65
Query: 293 VMALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDYI 472 VMALERVPADIRA+GGVARMSDPGLI++IK AVTIPVMAKARIGHFVEAQ+LEA+GVDY+ Sbjct: 66 VMALERVPADIRAQGGVARMSDPGLIRDIKRAVTIPVMAKARIGHFVEAQILEAVGVDYV 125
Query: 473 DESEVLTPADDVNHINKH 526 DESEVLTPADD +HINKH Sbjct: 126 DESEVLTPADDAHHINKH 143
>tr|B4FRZ2|B4FRZ2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 317
Score = 212 bits (540), Expect = 8e-54 Identities = 110/138 (79%), Positives = 123/138 (89%), Gaps = 6/138 (4%) Frame = +2
Query: 131 NGVVTVYG-NGA-----ISDPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATA 292 +GVVTVYG NGA PK ++++VKVGLAQMLRGGVIMDVV EQAR+AEEAGA A Sbjct: 6 SGVVTVYGSNGAELLEPSKQPKSATFSVKVGLAQMLRGGVIMDVVTPEQARLAEEAGACA 65
Query: 293 VMALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDYI 472 VMALERVPADIRA+GGVARMSDPGLI++IK AVTIPVMAKARIGHFVEAQ+LEA+GVDY+ Sbjct: 66 VMALERVPADIRAQGGVARMSDPGLIRDIKRAVTIPVMAKARIGHFVEAQILEAVGVDYV 125
Query: 473 DESEVLTPADDVNHINKH 526 DESEVLTPADD +HINKH Sbjct: 126 DESEVLTPADDAHHINKH 143
>tr|B4FQA2|B4FQA2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 380
Score = 212 bits (540), Expect = 8e-54 Identities = 110/138 (79%), Positives = 123/138 (89%), Gaps = 6/138 (4%) Frame = +2
Query: 131 NGVVTVYG-NGA-----ISDPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATA 292 +GVVTVYG NGA PK ++++VKVGLAQMLRGGVIMDVV EQAR+AEEAGA A Sbjct: 69 SGVVTVYGSNGAELLEPSKQPKSATFSVKVGLAQMLRGGVIMDVVTPEQARLAEEAGACA 128
Query: 293 VMALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDYI 472 VMALERVPADIRA+GGVARMSDPGLI++IK AVTIPVMAKARIGHFVEAQ+LEA+GVDY+ Sbjct: 129 VMALERVPADIRAQGGVARMSDPGLIRDIKRAVTIPVMAKARIGHFVEAQILEAVGVDYV 188
Query: 473 DESEVLTPADDVNHINKH 526 DESEVLTPADD +HINKH Sbjct: 189 DESEVLTPADDAHHINKH 206
>tr|A9RLD0|A9RLD0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_176118 PE=4 SV=1 Length = 313
Score = 211 bits (536), Expect = 2e-53 Identities = 113/139 (81%), Positives = 119/139 (85%), Gaps = 4/139 (2%) Frame = +2
Query: 122 MASNGVVTVYGNGA----ISDPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGAT 289 M N VV V NG+ + K SYAVKVGLAQMLRGGVIMDVV+ QARIAEEAGA Sbjct: 1 MEENRVVAVLNNGSGLSENQNKKTVSYAVKVGLAQMLRGGVIMDVVDVAQARIAEEAGAV 60
Query: 290 AVMALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDY 469 AVMALERVPADIRAEGGVARMSDP +IKEIK AVTIPVMAKARIGHFVEAQ+LEAIGVDY Sbjct: 61 AVMALERVPADIRAEGGVARMSDPSMIKEIKKAVTIPVMAKARIGHFVEAQILEAIGVDY 120
Query: 470 IDESEVLTPADDVNHINKH 526 IDESEVLTPADDV+HINKH Sbjct: 121 IDESEVLTPADDVHHINKH 139
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