DK946101 |
Clone id |
YMU02A01NGRL0011_H10 |
Library |
YMU02 |
Length |
398 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0011_H10. 5' end sequence. |
Accession |
DK946101 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL181Contig1 |
Sequence |
GGGCGAGGATTCCTTTGACTGACAATTCAATCATCGAGCAGGCCCTCGGGAAGACTGGCA TTATCTGCATTGAGGATCTTATTCATGAGATTTACACTGTCGGCCCACATTTCAAGGAGA CAAACAACTTCCTTTGGCCCTTTAAGTTGAGTGCTCCTCTAGGTGGCTTGAAAAAGAAGA GGAACCACTTTATTGAATCTGGAGATGCTGGCAACCGTGAAGATTATGTGAATGCCCTCA TCAGAAGAATGAACTAGCTAGTACGGCTATCTGACTAATGTTGGTTGTGGCAAGCTGTTC AACCATTCTCAACTGAGCGCTGGATTTTTTCTTTCCGAACTTTTGCTAATTTAGTTCAAA TTTTGAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P60039 |
Definition |
sp|P60039|RL73_ARATH 60S ribosomal protein L7-3 OS=Arabidopsis thaliana |
Align length |
83 |
Score (bit) |
149.0 |
E-value |
4.0e-36 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9PGL2 |
Definition |
tr|A9PGL2|A9PGL2_POPTR Putative uncharacterized protein OS=Populus trichocarpa |
Align length |
83 |
Score (bit) |
154.0 |
E-value |
2.0e-36 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK946101|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0011_H10, 5' (365 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9PGL2|A9PGL2_POPTR Putative uncharacterized protein OS=Popul... 154 2e-36 tr|A7QUB3|A7QUB3_VITVI Chromosome chr11 scaffold_177, whole geno... 154 2e-36 tr|A9PEI9|A9PEI9_POPTR Putative uncharacterized protein OS=Popul... 154 2e-36 tr|B7FH82|B7FH82_MEDTR Putative uncharacterized protein OS=Medic... 153 4e-36 tr|Q2HVI3|Q2HVI3_MEDTR Ribosomal protein L30 OS=Medicago truncat... 153 5e-36 tr|A9P9W9|A9P9W9_POPTR Putative uncharacterized protein OS=Popul... 152 6e-36 tr|B3TLT9|B3TLT9_ELAGV 60S ribosomal protein L7 OS=Elaeis guinee... 151 1e-35 tr|A7R6R7|A7R6R7_VITVI Chromosome undetermined scaffold_1397, wh... 151 2e-35 tr|A7R2M6|A7R2M6_VITVI Chromosome undetermined scaffold_436, who... 151 2e-35 tr|B7FHC4|B7FHC4_MEDTR Putative uncharacterized protein OS=Medic... 150 4e-35 tr|Q3EBG6|Q3EBG6_ARATH Uncharacterized protein At2g44120.2 OS=Ar... 149 7e-35 tr|Q0JAC6|Q0JAC6_ORYSJ Os04g0605900 protein OS=Oryza sativa subs... 148 2e-34 tr|B8ATU3|B8ATU3_ORYSI Putative uncharacterized protein OS=Oryza... 148 2e-34 tr|Q6YYR2|Q6YYR2_ORYSJ Os08g0234000 protein OS=Oryza sativa subs... 147 2e-34 tr|Q38HU4|Q38HU4_SOLTU Thaliana 60S ribosomal protein L7 (At2g44... 147 2e-34 tr|A6N0X3|A6N0X3_ORYSI 60S ribosomal protein l7-1 (Fragment) OS=... 147 2e-34 tr|A3BQX7|A3BQX7_ORYSJ Putative uncharacterized protein OS=Oryza... 147 2e-34 tr|A2YSN9|A2YSN9_ORYSI Putative uncharacterized protein OS=Oryza... 147 2e-34 tr|B4FTW5|B4FTW5_MAIZE 60S ribosomal protein L7-1 OS=Zea mays PE... 147 3e-34 tr|A9TJB0|A9TJB0_PHYPA Predicted protein OS=Physcomitrella paten... 146 4e-34 tr|A9T4E1|A9T4E1_PHYPA Predicted protein OS=Physcomitrella paten... 146 4e-34 tr|A9RTM8|A9RTM8_PHYPA Predicted protein OS=Physcomitrella paten... 146 4e-34 tr|A7R2M9|A7R2M9_VITVI Chromosome undetermined scaffold_436, who... 146 4e-34 tr|Q5I7K6|Q5I7K6_WHEAT Ribosomal protein L7 OS=Triticum aestivum... 146 6e-34 tr|B4FSG3|B4FSG3_MAIZE 60S ribosomal protein L7-1 OS=Zea mays PE... 146 6e-34 tr|A9RG91|A9RG91_PHYPA Predicted protein OS=Physcomitrella paten... 146 6e-34 tr|B4FQ03|B4FQ03_MAIZE 60S ribosomal protein L7-2 OS=Zea mays PE... 145 8e-34 tr|B4F8K1|B4F8K1_MAIZE 60S ribosomal protein L7-2 OS=Zea mays PE... 145 8e-34 tr|A9RCC4|A9RCC4_PHYPA Predicted protein OS=Physcomitrella paten... 145 1e-33 tr|Q7X8D0|Q7X8D0_ORYSJ OSJNBa0035M09.3 protein (Putative unchara... 142 6e-33
>tr|A9PGL2|A9PGL2_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 243
Score = 154 bits (390), Expect = 2e-36 Identities = 70/83 (84%), Positives = 76/83 (91%) Frame = +3
Query: 6 RIPLTDNSIIEQALGKTGIICIEDLIHEIYTVGPHFKETNNFLWPFKLSAPLGGLKKKRN 185 RIPLTDNSIIEQ LGK GIIC+EDLIHEI TVGPHFKE NNFLWPF+L APLGGLKKKRN Sbjct: 161 RIPLTDNSIIEQGLGKRGIICVEDLIHEIITVGPHFKEANNFLWPFQLKAPLGGLKKKRN 220
Query: 186 HFIESGDAGNREDYVNALIRRMN 254 H++E GDAGNRE+Y+N LIRRMN Sbjct: 221 HYVEGGDAGNRENYINELIRRMN 243
>tr|A7QUB3|A7QUB3_VITVI Chromosome chr11 scaffold_177, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006768001 PE=3 SV=1 Length = 245
Score = 154 bits (390), Expect = 2e-36 Identities = 72/83 (86%), Positives = 75/83 (90%) Frame = +3
Query: 6 RIPLTDNSIIEQALGKTGIICIEDLIHEIYTVGPHFKETNNFLWPFKLSAPLGGLKKKRN 185 R LTDNSIIEQALGK GIICIEDLIHEI TVGPHFKE NNFLWPFKL APLGGLKKKRN Sbjct: 163 RTALTDNSIIEQALGKFGIICIEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRN 222
Query: 186 HFIESGDAGNREDYVNALIRRMN 254 H++E GDAGNREDY+N LIRRMN Sbjct: 223 HYVEGGDAGNREDYINELIRRMN 245
>tr|A9PEI9|A9PEI9_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 244
Score = 154 bits (389), Expect = 2e-36 Identities = 70/83 (84%), Positives = 76/83 (91%) Frame = +3
Query: 6 RIPLTDNSIIEQALGKTGIICIEDLIHEIYTVGPHFKETNNFLWPFKLSAPLGGLKKKRN 185 RIPLTDNSIIEQ LGK GIIC+EDLIHEI TVGPHFKE NNFLWPF+L APLGGLKKKRN Sbjct: 162 RIPLTDNSIIEQGLGKHGIICVEDLIHEIMTVGPHFKEANNFLWPFQLKAPLGGLKKKRN 221
Query: 186 HFIESGDAGNREDYVNALIRRMN 254 H++E GDAGNRE+Y+N LIRRMN Sbjct: 222 HYVEGGDAGNRENYINELIRRMN 244
>tr|B7FH82|B7FH82_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 244
Score = 153 bits (387), Expect = 4e-36 Identities = 70/83 (84%), Positives = 76/83 (91%) Frame = +3
Query: 6 RIPLTDNSIIEQALGKTGIICIEDLIHEIYTVGPHFKETNNFLWPFKLSAPLGGLKKKRN 185 RI LTDNSIIEQ LGK GIICIEDLIHEI TVGPHF+E NNFLWPFKL APLGG+KKKRN Sbjct: 162 RIALTDNSIIEQVLGKHGIICIEDLIHEILTVGPHFREANNFLWPFKLKAPLGGMKKKRN 221
Query: 186 HFIESGDAGNREDYVNALIRRMN 254 H++ESGDAGNREDY+N LIR+MN Sbjct: 222 HYVESGDAGNREDYINELIRKMN 244
>tr|Q2HVI3|Q2HVI3_MEDTR Ribosomal protein L30 OS=Medicago truncatula GN=MtrDRAFT_AC148819g1v2 PE=3 SV=1 Length = 244
Score = 153 bits (386), Expect = 5e-36 Identities = 70/83 (84%), Positives = 75/83 (90%) Frame = +3
Query: 6 RIPLTDNSIIEQALGKTGIICIEDLIHEIYTVGPHFKETNNFLWPFKLSAPLGGLKKKRN 185 RI LTDNSIIEQ LGK GIICIEDLIHEI TVGPHF+E NNFLWPFKL APLGG+KKKRN Sbjct: 162 RIALTDNSIIEQVLGKHGIICIEDLIHEILTVGPHFREANNFLWPFKLKAPLGGMKKKRN 221
Query: 186 HFIESGDAGNREDYVNALIRRMN 254 H++E GDAGNREDY+N LIRRMN Sbjct: 222 HYVEGGDAGNREDYINELIRRMN 244
>tr|A9P9W9|A9P9W9_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 244
Score = 152 bits (385), Expect = 6e-36 Identities = 69/83 (83%), Positives = 75/83 (90%) Frame = +3
Query: 6 RIPLTDNSIIEQALGKTGIICIEDLIHEIYTVGPHFKETNNFLWPFKLSAPLGGLKKKRN 185 RIPLTDNSI+EQ LGK GIIC EDLIHEI TVGPHFKE NNFLWPF+L APLGGLKKKRN Sbjct: 162 RIPLTDNSIVEQGLGKHGIICTEDLIHEIITVGPHFKEANNFLWPFQLKAPLGGLKKKRN 221
Query: 186 HFIESGDAGNREDYVNALIRRMN 254 H++E GDAGNRED++N LIRRMN Sbjct: 222 HYVEGGDAGNREDFINELIRRMN 244
>tr|B3TLT9|B3TLT9_ELAGV 60S ribosomal protein L7 OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 244
Score = 151 bits (382), Expect = 1e-35 Identities = 68/83 (81%), Positives = 75/83 (90%) Frame = +3
Query: 6 RIPLTDNSIIEQALGKTGIICIEDLIHEIYTVGPHFKETNNFLWPFKLSAPLGGLKKKRN 185 R+PL+DNSIIEQ LGK GIICIEDL+HEI TVGPHFKE NNFLWPFKL APLGGLKKKR Sbjct: 162 RVPLSDNSIIEQGLGKYGIICIEDLVHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRK 221
Query: 186 HFIESGDAGNREDYVNALIRRMN 254 H++E GDAGNRE+Y+N LIRRMN Sbjct: 222 HYVEGGDAGNRENYINELIRRMN 244
>tr|A7R6R7|A7R6R7_VITVI Chromosome undetermined scaffold_1397, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00008359001 PE=4 SV=1 Length = 119
Score = 151 bits (381), Expect = 2e-35 Identities = 69/83 (83%), Positives = 75/83 (90%) Frame = +3
Query: 6 RIPLTDNSIIEQALGKTGIICIEDLIHEIYTVGPHFKETNNFLWPFKLSAPLGGLKKKRN 185 R LTDNSI+EQALGK GIIC+EDLIHEI TVGPHFKE NNFLWPFKL APLGGLKKKRN Sbjct: 37 RTALTDNSIVEQALGKFGIICMEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRN 96
Query: 186 HFIESGDAGNREDYVNALIRRMN 254 H++E GDAGNRE+Y+N LIRRMN Sbjct: 97 HYVEGGDAGNRENYINELIRRMN 119
>tr|A7R2M6|A7R2M6_VITVI Chromosome undetermined scaffold_436, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00013102001 PE=3 SV=1 Length = 186
Score = 151 bits (381), Expect = 2e-35 Identities = 69/83 (83%), Positives = 75/83 (90%) Frame = +3
Query: 6 RIPLTDNSIIEQALGKTGIICIEDLIHEIYTVGPHFKETNNFLWPFKLSAPLGGLKKKRN 185 R LTDNSI+EQALGK GIIC+EDLIHEI TVGPHFKE NNFLWPFKL APLGGLKKKRN Sbjct: 104 RTALTDNSIVEQALGKFGIICMEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRN 163
Query: 186 HFIESGDAGNREDYVNALIRRMN 254 H++E GDAGNRE+Y+N LIRRMN Sbjct: 164 HYVEGGDAGNRENYINELIRRMN 186
>tr|B7FHC4|B7FHC4_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 244
Score = 150 bits (378), Expect = 4e-35 Identities = 69/83 (83%), Positives = 74/83 (89%) Frame = +3
Query: 6 RIPLTDNSIIEQALGKTGIICIEDLIHEIYTVGPHFKETNNFLWPFKLSAPLGGLKKKRN 185 RI LTDNSIIEQ LGK GIICIEDLIHEI TVGPHF+E NNFLW FKL APLGG+KKKRN Sbjct: 162 RIALTDNSIIEQVLGKHGIICIEDLIHEILTVGPHFREANNFLWSFKLKAPLGGMKKKRN 221
Query: 186 HFIESGDAGNREDYVNALIRRMN 254 H++E GDAGNREDY+N LIRRMN Sbjct: 222 HYVEGGDAGNREDYINELIRRMN 244
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