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NBDC - LSDB Archive
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DK946133
Clone id YMU02A01NGRL0011_J06
Library
Length 558
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0011_J06. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
AGAGCTCCAGATTAGCAGAGCAAAGGGAGAGTGATTGTACGCAGTATTCAGTATGGCCAT
CTCCATAGCCGCTTCCTCGGCAGTTGTCGCTCCTAGCTGCGCCCCCGCAGAGAGCTTGTC
AAAGAGCTTCTCTGGTCTCAAGGCCACTACCCTGTTCGCCCCCCAGAGCCCCAACCCGCT
CGCCATCTCTGATGGCAGCCGTGTGAGCGCCATGCTTGTGTGGAAGCCGTATGACAACGA
GAAGTTCGAGACTCTGTCCTACTTGCCGCCTTTGTCAAGTGAGCAGATTGCGAAGCACGT
GGACTTCATGGTCCGAAAAGGCTGGACCCCTTGCATTGAGTTCGACTAAATCGGGAGCGT
GTACCGAGAGCACTTCCACGGCAACGGCTACTACAATGGGCGGTACTGGGTGATGTGGAA
GCTGCCCATGTTTGGCTGCCAAGATGCCGCTGCTGTGCTGCGTGAAATTGCACAGTGCGC
CAAGGAGTATCCTGAAGCCTTCATCCGCGTGCTGGGCTTTGACGCTCAGAGGCCGGTGCA
GGTCTCCAGCTTCCTTGT
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 152
Score (bit) 168.0
E-value 1.0e-41
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946133|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0011_J06, 5'
         (558 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   168   1e-41
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   166   7e-41
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   166   9e-41
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   166   9e-41
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai...   165   1e-40
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai...   164   2e-40
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...   164   3e-40
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   164   4e-40
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   164   4e-40
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...   163   5e-40
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   162   8e-40
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   162   8e-40
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   162   8e-40
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...   162   8e-40
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai...   162   1e-39
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   162   1e-39
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   161   2e-39
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch...   161   2e-39
sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chai...   161   2e-39
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai...   161   2e-39
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   160   3e-39
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   160   4e-39
sp|P05346|RBS1_BRANA Ribulose bisphosphate carboxylase small cha...   160   4e-39
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   160   5e-39
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   160   5e-39
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...   160   5e-39
sp|P26573|RBS8_NICPL Ribulose bisphosphate carboxylase small cha...   159   7e-39
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai...   159   9e-39
sp|P08474|RBS_CUCSA Ribulose bisphosphate carboxylase small chai...   159   9e-39
sp|Q39746|RBS4_FLAPR Ribulose bisphosphate carboxylase small cha...   159   9e-39

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  168 bits (426), Expect = 1e-41
 Identities = 80/152 (52%), Positives = 105/152 (69%), Gaps = 5/152 (3%)
 Frame = +2

Query: 116 LSKSFSGLKATTLF--APQSPNPLAI--SDGSRVSAMLVWKPYDNEKFETLSYLPPLSSE 283
           L+  F+GLK+   F    ++ N  +   S+G RV  M VW P   +K+ETLSYLPPLS E
Sbjct: 22  LAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDE 81

Query: 284 QIAKHVDFMVRKGWTPCIEFD*I-GSVYREHFHGNGYYNGRYWVMWKLPMFGCQDAAAVL 460
            ++K +D+++R  W PC+EF+   G VYREH H  GYY+GRYW MWKLPMFGC D+A V+
Sbjct: 82  ALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVM 141

Query: 461 REIAQCAKEYPEAFIRVLGFDAQRPVQVSSFL 556
           +E+ +C KEYP AFIRV+GFD  R VQ  SF+
Sbjct: 142 KEVGECKKEYPNAFIRVIGFDNIRQVQCISFI 173


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
          Length = 182

 Score =  166 bits (420), Expect = 7e-41
 Identities = 81/148 (54%), Positives = 106/148 (71%), Gaps = 5/148 (3%)
 Frame = +2

Query: 128 FSGLKATTLF--APQSPNPLA--ISDGSRVSAMLVWKPYDNEKFETLSYLPPLSSEQIAK 295
           F+ LK+T+ F    ++ N +    S+G RV  M VW P   +KFETLSYLPPLSSEQ+AK
Sbjct: 28  FTCLKSTSAFPVTQKTNNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAK 87

Query: 296 HVDFMVRKGWTPCIEFD*I-GSVYREHFHGNGYYNGRYWVMWKLPMFGCQDAAAVLREIA 472
            VD+++RK   PC+EF+   G VYREH    GYY+GRYW MWKLPMFGC D++ VL+E+ 
Sbjct: 88  EVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKELE 147

Query: 473 QCAKEYPEAFIRVLGFDAQRPVQVSSFL 556
           +C K YP AFIR++GFD +R VQ+ SF+
Sbjct: 148 ECKKAYPSAFIRIIGFDNKRQVQIISFI 175


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  166 bits (419), Expect = 9e-41
 Identities = 77/144 (53%), Positives = 99/144 (68%)
 Frame = +2

Query: 125 SFSGLKATTLFAPQSPNPLAISDGSRVSAMLVWKPYDNEKFETLSYLPPLSSEQIAKHVD 304
           S +    T  FA  S  P   S+G RV  M VW P   +KFETLSYLPPL+ EQ+ + VD
Sbjct: 31  SSAAFPVTRKFADSSKLP---SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVD 87

Query: 305 FMVRKGWTPCIEFD*IGSVYREHFHGNGYYNGRYWVMWKLPMFGCQDAAAVLREIAQCAK 484
           +++R GW PCIEF  +G VYRE+ +  GYY+GRYW MWKLPMFGC D++ VL+E+ +C+K
Sbjct: 88  YLIRNGWIPCIEFCKVGFVYREYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSK 147

Query: 485 EYPEAFIRVLGFDAQRPVQVSSFL 556
            YP+ F R++GFD  R VQ  SFL
Sbjct: 148 AYPDYFNRIIGFDNTRQVQCISFL 171


>sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1
          Length = 171

 Score =  166 bits (419), Expect = 9e-41
 Identities = 78/152 (51%), Positives = 102/152 (67%), Gaps = 8/152 (5%)
 Frame = +2

Query: 125 SFSGLKATTLF--------APQSPNPLAISDGSRVSAMLVWKPYDNEKFETLSYLPPLSS 280
           +F+GLK+T  F        A         S+G RV  M VW P+ N KFETLSYLP L+ 
Sbjct: 15  AFTGLKSTAQFPSSFKMSNAAAEWEQKTTSNGGRVRCMQVWPPFGNPKFETLSYLPTLTE 74

Query: 281 EQIAKHVDFMVRKGWTPCIEFD*IGSVYREHFHGNGYYNGRYWVMWKLPMFGCQDAAAVL 460
           EQ+ K V++++R  W PC+EFD  GS+ R++    GYY+GRYWVMWKLPMFGC +A+ V+
Sbjct: 75  EQLVKEVEYLLRNKWVPCLEFDLEGSISRKYNRSPGYYDGRYWVMWKLPMFGCTEASQVI 134

Query: 461 REIAQCAKEYPEAFIRVLGFDAQRPVQVSSFL 556
            E+ +CAK YP+AFIRV+GFD  R VQ  SF+
Sbjct: 135 NEVRECAKAYPKAFIRVIGFDNVRQVQCISFI 166


>sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Trifolium repens GN=RBCS PE=3 SV=1
          Length = 178

 Score =  165 bits (418), Expect = 1e-40
 Identities = 79/151 (52%), Positives = 106/151 (70%), Gaps = 4/151 (2%)
 Frame = +2

Query: 116 LSKSFSGLKATTLFAPQSPN---PLAISDGSRVSAMLVWKPYDNEKFETLSYLPPLSSEQ 286
           L+  F+GLK++  F     N       S+GSRV+ M VW P   +KFETLSYLPPL+ EQ
Sbjct: 21  LATPFTGLKSSAGFPVTKKNNDITSITSNGSRVNCMQVWPPVGKKKFETLSYLPPLTDEQ 80

Query: 287 IAKHVDFMVRKGWTPCIEFD*I-GSVYREHFHGNGYYNGRYWVMWKLPMFGCQDAAAVLR 463
           + K V++++RKGW PC+EF+   G V+R++    GYY+GRYW MW+LP+FG  DAA VL+
Sbjct: 81  LLKEVEYLLRKGWVPCVEFELEKGFVHRQYNSSPGYYDGRYWTMWRLPLFGTTDAAQVLK 140

Query: 464 EIAQCAKEYPEAFIRVLGFDAQRPVQVSSFL 556
           E+A+C  EYPEAFIR++GFD  R VQ  SF+
Sbjct: 141 EVAECKAEYPEAFIRIIGFDNVRQVQCISFI 171


>sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Capsicum annuum GN=RBCS PE=2 SV=1
          Length = 187

 Score =  164 bits (416), Expect = 2e-40
 Identities = 78/149 (52%), Positives = 101/149 (67%), Gaps = 5/149 (3%)
 Frame = +2

Query: 125 SFSGLKATTLFAPQSPNPLAI----SDGSRVSAMLVWKPYDNEKFETLSYLPPLSSEQIA 292
           SF+GLK+   F       L I    S+G RV  MLVW P + +K+ETLSYLP LS EQ+ 
Sbjct: 25  SFNGLKSAASFPVTRKQDLDITSIASNGGRVECMLVWPPINKKKYETLSYLPDLSDEQLL 84

Query: 293 KHVDFMVRKGWTPCIEFD*I-GSVYREHFHGNGYYNGRYWVMWKLPMFGCQDAAAVLREI 469
           K ++++++KGW PC+EF+   G VYREH    GYY+GRYW MWKLPMFGC DA  VL E+
Sbjct: 85  KEIEYLLQKGWVPCLEFETEHGFVYREHHRSPGYYDGRYWTMWKLPMFGCTDATQVLNEV 144

Query: 470 AQCAKEYPEAFIRVLGFDAQRPVQVSSFL 556
            +  K YP+A+IR++GFD  R VQ  SF+
Sbjct: 145 QEAKKAYPQAWIRIIGFDNVRQVQCISFI 173


>sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Marchantia paleacea GN=RBCS PE=2 SV=1
          Length = 180

 Score =  164 bits (415), Expect = 3e-40
 Identities = 79/143 (55%), Positives = 100/143 (69%), Gaps = 1/143 (0%)
 Frame = +2

Query: 131 SGLKATTLFAPQSPNPLAISDGSRVSAMLVWKPYDNEKFETLSYLPPLSSEQIAKHVDFM 310
           +GLKA              ++GSRVS M VW+PY+N KFETLSYLPPLS + +AK +D++
Sbjct: 32  AGLKAGVFGGKSEWQTKTQTNGSRVSCMQVWEPYNNLKFETLSYLPPLSQDALAKQIDYV 91

Query: 311 VRKGWTPCIEFD*IGSVYREHFHGNGYYNGRYWVMWKLPMFGCQDAAAVLREIAQCAKEY 490
           ++ GW PCIEFD  G+V RE     GYY+GRYW MWKLPMFGC D+A+VLREI +C K Y
Sbjct: 92  IKSGWAPCIEFDVQGTVTREGSTMPGYYDGRYWTMWKLPMFGCTDSASVLREIEECKKLY 151

Query: 491 -PEAFIRVLGFDAQRPVQVSSFL 556
             + +IR LGFD  R VQ +SF+
Sbjct: 152 GKKCYIRCLGFDNTRQVQCASFI 174


>sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1
          Length = 183

 Score =  164 bits (414), Expect = 4e-40
 Identities = 78/147 (53%), Positives = 104/147 (70%), Gaps = 4/147 (2%)
 Frame = +2

Query: 128 FSGLKATTLF-APQSPNPLA--ISDGSRVSAMLVWKPYDNEKFETLSYLPPLSSEQIAKH 298
           F+GLK+++ F   +  N +    S+G RV  M VW P   +KFETLSYLPPLSSE +AK 
Sbjct: 30  FNGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSESLAKE 89

Query: 299 VDFMVRKGWTPCIEFD*-IGSVYREHFHGNGYYNGRYWVMWKLPMFGCQDAAAVLREIAQ 475
           VD+++RK W PC+EF+   G VYRE+    GYY+GRYW MWKLPMFGC D++ VL+E+ +
Sbjct: 90  VDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEE 149

Query: 476 CAKEYPEAFIRVLGFDAQRPVQVSSFL 556
             K YP++FIR++GFD  R VQ  SF+
Sbjct: 150 AKKAYPQSFIRIIGFDNVRQVQCISFI 176


>sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small chain
           1A, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1A
           PE=1 SV=2
          Length = 180

 Score =  164 bits (414), Expect = 4e-40
 Identities = 77/148 (52%), Positives = 104/148 (70%), Gaps = 5/148 (3%)
 Frame = +2

Query: 128 FSGLKATTLFAP--QSPNPLA--ISDGSRVSAMLVWKPYDNEKFETLSYLPPLSSEQIAK 295
           F+GLK++  F    ++ N +    S+G RV+ M VW P   +KFETLSYLP L+  ++AK
Sbjct: 24  FNGLKSSAAFPATRKANNDITSITSNGGRVNCMQVWPPIGKKKFETLSYLPDLTDSELAK 83

Query: 296 HVDFMVRKGWTPCIEFD*I-GSVYREHFHGNGYYNGRYWVMWKLPMFGCQDAAAVLREIA 472
            VD+++R  W PC+EF+   G VYREH +  GYY+GRYW MWKLP+FGC D+A VL+E+ 
Sbjct: 84  EVDYLIRNKWIPCVEFELEHGFVYREHGNSPGYYDGRYWTMWKLPLFGCTDSAQVLKEVE 143

Query: 473 QCAKEYPEAFIRVLGFDAQRPVQVSSFL 556
           +C KEYP AFIR++GFD  R VQ  SF+
Sbjct: 144 ECKKEYPNAFIRIIGFDNTRQVQCISFI 171


>sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small chain
           2, chloroplastic OS=Spinacia oleracea GN=RBCS2 PE=1 SV=1
          Length = 180

 Score =  163 bits (413), Expect = 5e-40
 Identities = 76/147 (51%), Positives = 101/147 (68%), Gaps = 4/147 (2%)
 Frame = +2

Query: 128 FSGLKATTLFAPQSPNP---LAISDGSRVSAMLVWKPYDNEKFETLSYLPPLSSEQIAKH 298
           F+GLK+T  F     N       S+G RV  M VW   + +++ETLSYLPPL+++Q+A+ 
Sbjct: 27  FTGLKSTVGFPATKKNDDITSLASNGGRVQCMKVWPTQNMKRYETLSYLPPLTTDQLARQ 86

Query: 299 VDFMVRKGWTPCIEFD*I-GSVYREHFHGNGYYNGRYWVMWKLPMFGCQDAAAVLREIAQ 475
           VD+++   W PC+EF+   G VYREH +  GYY+GRYW MWKLPMFGC D A VL E+ +
Sbjct: 87  VDYLLNNKWVPCLEFETDHGFVYREHHNSPGYYDGRYWTMWKLPMFGCTDPAQVLNELEE 146

Query: 476 CAKEYPEAFIRVLGFDAQRPVQVSSFL 556
           C KEYP AFIR++GFD+ R VQ  SF+
Sbjct: 147 CKKEYPNAFIRIIGFDSNRQVQCVSFI 173
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 147
Score (bit) 262.0
E-value 8.0e-69
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946133|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0011_J06, 5'
         (558 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   262   8e-69
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   182   1e-44
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   179   1e-43
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   178   2e-43
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   178   2e-43
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   177   3e-43
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   177   3e-43
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c...   173   5e-42
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c...   171   3e-41
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   170   4e-41
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c...   170   4e-41
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   170   5e-41
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c...   168   2e-40
tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c...   167   3e-40
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c...   167   3e-40
tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c...   167   4e-40
tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c...   166   6e-40
tr|A9SRS0|A9SRS0_PHYPA Ribulose bisphosphate carboxylase small c...   166   6e-40
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c...   166   6e-40
tr|A9U4X8|A9U4X8_PHYPA Ribulose bisphosphate carboxylase small c...   165   1e-39
tr|A9U4X7|A9U4X7_PHYPA Ribulose bisphosphate carboxylase small c...   165   1e-39
tr|Q6RWD8|Q6RWD8_CAPAN Ribulose bisphosphate carboxylase small c...   164   2e-39
tr|A9SCN2|A9SCN2_PHYPA Ribulose bisphosphate carboxylase small c...   164   2e-39
tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small c...   164   2e-39
tr|A9S8M9|A9S8M9_PHYPA Ribulose bisphosphate carboxylase small c...   164   3e-39
tr|A9S8M6|A9S8M6_PHYPA Ribulose bisphosphate carboxylase small c...   164   3e-39
tr|Q0WVH4|Q0WVH4_ARATH Ribulose bisphosphate carboxylase small c...   164   4e-39
tr|A9NNZ8|A9NNZ8_PICSI Ribulose bisphosphate carboxylase small c...   164   4e-39
tr|A9NML5|A9NML5_PICSI Ribulose bisphosphate carboxylase small c...   164   4e-39
tr|A9NMJ1|A9NMJ1_PICSI Ribulose bisphosphate carboxylase small c...   164   4e-39

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  262 bits (670), Expect = 8e-69
 Identities = 120/147 (81%), Positives = 137/147 (93%)
 Frame = +2

Query: 116 LSKSFSGLKATTLFAPQSPNPLAISDGSRVSAMLVWKPYDNEKFETLSYLPPLSSEQIAK 295
           LSKSFSGLKA TLFAP+  NPLAIS+GSR+SAMLVWKPYDN+KFETLSYLPPL+++QIAK
Sbjct: 22  LSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQIAK 81

Query: 296 HVDFMVRKGWTPCIEFD*IGSVYREHFHGNGYYNGRYWVMWKLPMFGCQDAAAVLREIAQ 475
            V++MVRKGWTPCIEFD IGSVYREHFHG+GYY+GRYW+MWKLPMFGC D+ +VLREIA+
Sbjct: 82  QVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLREIAE 141

Query: 476 CAKEYPEAFIRVLGFDAQRPVQVSSFL 556
           CAKEYP AFIRVLGFDA+R VQV+ FL
Sbjct: 142 CAKEYPTAFIRVLGFDAKRQVQVAGFL 168


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  182 bits (461), Expect = 1e-44
 Identities = 84/148 (56%), Positives = 109/148 (73%), Gaps = 3/148 (2%)
 Frame = +2

Query: 122 KSFSGLKATTLFAPQSPNPLAISDGSRVSAMLVWKPYDNEKFETLSYLPPLSSEQIAKHV 301
           K FSGLK+TTLFA ++    ++ +GSRV  M VW P    KFET SYLPPL+ +QIAK V
Sbjct: 27  KQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 302 DFMVRKGWTPCIEFD*IGSVYREHFHG---NGYYNGRYWVMWKLPMFGCQDAAAVLREIA 472
           DFM+++   PCIEFD +GSV R +F G   +GYY+GRYW MWKLPMFGC D+A VLREI 
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 473 QCAKEYPEAFIRVLGFDAQRPVQVSSFL 556
           +C + +P  ++RVLGFD+++ VQ+  FL
Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQVQICGFL 174


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  179 bits (453), Expect = 1e-43
 Identities = 83/148 (56%), Positives = 108/148 (72%), Gaps = 3/148 (2%)
 Frame = +2

Query: 122 KSFSGLKATTLFAPQSPNPLAISDGSRVSAMLVWKPYDNEKFETLSYLPPLSSEQIAKHV 301
           K FSGLK+TTL A ++    ++ +GSRV  M VW P    KFET SYLPPL+ +QIAK V
Sbjct: 27  KQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 302 DFMVRKGWTPCIEFD*IGSVYREHFHG---NGYYNGRYWVMWKLPMFGCQDAAAVLREIA 472
           DFM+++   PCIEFD +GSV R +F G   +GYY+GRYW MWKLPMFGC D+A VLREI 
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 473 QCAKEYPEAFIRVLGFDAQRPVQVSSFL 556
           +C + +P  ++RVLGFD+++ VQ+  FL
Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQVQICGFL 174


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
           PE=2 SV=1
          Length = 184

 Score =  178 bits (451), Expect = 2e-43
 Identities = 81/148 (54%), Positives = 107/148 (72%), Gaps = 3/148 (2%)
 Frame = +2

Query: 122 KSFSGLKATTLFAPQSPNPLAISDGSRVSAMLVWKPYDNEKFETLSYLPPLSSEQIAKHV 301
           K+FSGLK+ TLF  +S    ++ +GSRV  M VW P    KFET SYLPPLS +QIA+ V
Sbjct: 32  KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 91

Query: 302 DFMVRKGWTPCIEFD*IGSVYREHFHG---NGYYNGRYWVMWKLPMFGCQDAAAVLREIA 472
           D+M+++   PCIEFD +G+V R +F G   +GYY+GRYW MWKLPMFGC D++ VLREI 
Sbjct: 92  DYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 473 QCAKEYPEAFIRVLGFDAQRPVQVSSFL 556
           +C   YP  ++RVLGFD+++ VQ+  FL
Sbjct: 152 ECKTSYPSCWVRVLGFDSKKQVQICGFL 179


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_225236 PE=3 SV=1
          Length = 183

 Score =  178 bits (451), Expect = 2e-43
 Identities = 80/148 (54%), Positives = 109/148 (73%), Gaps = 3/148 (2%)
 Frame = +2

Query: 122 KSFSGLKATTLFAPQSPNPLAISDGSRVSAMLVWKPYDNEKFETLSYLPPLSSEQIAKHV 301
           K+FSGLK+ TLF+ Q+    ++ +GSRV  M VW P    KFET SYLPPL+ ++IAK V
Sbjct: 31  KAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQV 90

Query: 302 DFMVRKGWTPCIEFD*IGSVYREHFHG---NGYYNGRYWVMWKLPMFGCQDAAAVLREIA 472
           D+M+++   PCIEFD +GSV R +F G   +GYY+GRYW MWKLPMFGC D++ VLREI 
Sbjct: 91  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 150

Query: 473 QCAKEYPEAFIRVLGFDAQRPVQVSSFL 556
           +C  ++P  ++RVLGFD+++ VQ+  FL
Sbjct: 151 ECKTQFPSCWVRVLGFDSKKQVQICGFL 178


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  177 bits (450), Expect = 3e-43
 Identities = 80/148 (54%), Positives = 109/148 (73%), Gaps = 3/148 (2%)
 Frame = +2

Query: 122 KSFSGLKATTLFAPQSPNPLAISDGSRVSAMLVWKPYDNEKFETLSYLPPLSSEQIAKHV 301
           K+FSGLK+ TLF+ ++    ++ +GSRV  M VW P    KFET SYLPPL+ +QIAK V
Sbjct: 62  KAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 121

Query: 302 DFMVRKGWTPCIEFD*IGSVYREHFHG---NGYYNGRYWVMWKLPMFGCQDAAAVLREIA 472
           D+M+++   PCIEFD +GSV R +F G   +GYY+GRYW MWKLPMFGC D++ VLREI 
Sbjct: 122 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 181

Query: 473 QCAKEYPEAFIRVLGFDAQRPVQVSSFL 556
           +C  ++P  ++RVLGFD+++ VQ+  FL
Sbjct: 182 ECKSQFPSCWVRVLGFDSKKQVQICGFL 209


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score =  177 bits (450), Expect = 3e-43
 Identities = 81/148 (54%), Positives = 108/148 (72%), Gaps = 3/148 (2%)
 Frame = +2

Query: 122 KSFSGLKATTLFAPQSPNPLAISDGSRVSAMLVWKPYDNEKFETLSYLPPLSSEQIAKHV 301
           K+FSGLK  TLF+ ++    A+ +GSRV  M VW P    KFET SYLPPL+ +QIAK V
Sbjct: 32  KAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 91

Query: 302 DFMVRKGWTPCIEFD*IGSVYREHFHG---NGYYNGRYWVMWKLPMFGCQDAAAVLREIA 472
           D+M+++   PCIEFD +GSV R +F G   +GYY+GRYW MWKLPMFGC D++ VLREI 
Sbjct: 92  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 473 QCAKEYPEAFIRVLGFDAQRPVQVSSFL 556
           +C  ++P  ++RVLGFD+++ VQ+  FL
Sbjct: 152 ECKSQFPSCWVRVLGFDSKKQVQICGFL 179


>tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_123666 PE=3 SV=1
          Length = 181

 Score =  173 bits (439), Expect = 5e-42
 Identities = 81/145 (55%), Positives = 103/145 (71%)
 Frame = +2

Query: 122 KSFSGLKATTLFAPQSPNPLAISDGSRVSAMLVWKPYDNEKFETLSYLPPLSSEQIAKHV 301
           K+FSGLK+ TLF+ QS    ++ +GSRV+ M VW P    KFET SYLPPLS + IAK V
Sbjct: 32  KAFSGLKSATLFSSQSQQLSSVQNGSRVNCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 302 DFMVRKGWTPCIEFD*IGSVYREHFHGNGYYNGRYWVMWKLPMFGCQDAAAVLREIAQCA 481
           ++M+++   PC+EFD    V RE+    GYY+GRYW MWKLPMFGCQD+A VLREI +C 
Sbjct: 92  EYMIQQKLIPCLEFDNSKGVTRENNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECK 151

Query: 482 KEYPEAFIRVLGFDAQRPVQVSSFL 556
           K +P  F+RVLGFD  + VQ+  FL
Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICGFL 176


>tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_115069 PE=3 SV=1
          Length = 181

 Score =  171 bits (432), Expect = 3e-41
 Identities = 78/145 (53%), Positives = 102/145 (70%)
 Frame = +2

Query: 122 KSFSGLKATTLFAPQSPNPLAISDGSRVSAMLVWKPYDNEKFETLSYLPPLSSEQIAKHV 301
           K+FSGLK+ T+F+ ++ N  ++ +GSRV  M VW P    KFET SYLPPLS + IAK V
Sbjct: 32  KAFSGLKSATVFSGKAQNSSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 302 DFMVRKGWTPCIEFD*IGSVYREHFHGNGYYNGRYWVMWKLPMFGCQDAAAVLREIAQCA 481
           ++M+++   PC+EFD    V R +    GYY+GRYW MWKLPMFGCQD+A VLREI +C 
Sbjct: 92  EYMIQQKLIPCLEFDNANGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECK 151

Query: 482 KEYPEAFIRVLGFDAQRPVQVSSFL 556
           K +P  F+RVLGFD  + VQ+  FL
Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICGFL 176


>tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small
           chain OS=Lactuca sativa PE=2 SV=1
          Length = 181

 Score =  170 bits (431), Expect = 4e-41
 Identities = 80/152 (52%), Positives = 106/152 (69%), Gaps = 5/152 (3%)
 Frame = +2

Query: 116 LSKSFSGLKATTLF--APQSPNPLAI--SDGSRVSAMLVWKPYDNEKFETLSYLPPLSSE 283
           L+  F+GLK+   F    ++ N  +   S+G RV  M VW P   +K+ETLSYLPPLS E
Sbjct: 22  LAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDE 81

Query: 284 QIAKHVDFMVRKGWTPCIEFD*I-GSVYREHFHGNGYYNGRYWVMWKLPMFGCQDAAAVL 460
            ++K +D+++R  W PC+EF+   G VYREH H  GYY+GRYW MWKLPMFGC D+A V+
Sbjct: 82  ALSKEIDYLIRNKWVPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVM 141

Query: 461 REIAQCAKEYPEAFIRVLGFDAQRPVQVSSFL 556
           +E+ +C KEYP AFIRV+GFD+ R VQ  SF+
Sbjct: 142 KEVGECKKEYPNAFIRVIGFDSVRQVQCISFI 173