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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK946138
Clone id YMU02A01NGRL0011_J16
Library
Length 568
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0011_J16. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
CGGATGGTCTGAAAGGGAGGGTGTTTGAAGTGTCCCTGGCAGATTTACAAAATGACGAGG
ATCATGCTCCTCGCAAAATCAAGCTCCGCGCTGAAGATGTTCAGGGAAAGAACGTCCTCA
CAAACTTCTGGGGGATGGACTTCACAACAGATAAGCTGCGATCCCTCGTACGCAAGTGGC
AATCATTGATTGAGGCACATGTGGATGTGAAGACCACTGACAACTACACTTTGAGGTTAT
TTTGTATTGCCTTCACAAAAAAGCGCCCCAATCAAATTAAGAAGACTTGCTATGCTCAGA
CGAGTCAAATTCGACAGATCCGTAAGAAAATGATTGAGATAATGGTCCGTGAAGCTCAAT
CTTGTGACCTGAAGGATCTTGTGGCTAAGTTTATACCTGAGGCTATTGGAAAGGAGATTG
AGAAGGCCACTGCAGGCATTTATCCTCTGCAAAACATTTACATTAGAAAAGTAAAAATTC
TGAAAGCACCCAAATTTGATTTGGGGAAGCTGATGGAGGTACATGGGGATTATTCAGAGG
ACGTTGGTGTAAAGGTTGAGAGGCCTGC
■■Homology search results ■■ -
sp_hit_id P49198
Definition sp|P49198|RS3A_HELAN 40S ribosomal protein S3a OS=Helianthus annuus
Align length 183
Score (bit) 323.0
E-value 4.0e-88
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946138|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0011_J16, 5'
         (553 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P49198|RS3A_HELAN 40S ribosomal protein S3a OS=Helianthus ann...   323   4e-88
sp|Q42262|RS3A2_ARATH 40S ribosomal protein S3a-2 OS=Arabidopsis...   323   4e-88
sp|P33444|RS3A_CATRO 40S ribosomal protein S3a OS=Catharanthus r...   322   6e-88
sp|Q9CAV0|RS3A1_ARATH 40S ribosomal protein S3a-1 OS=Arabidopsis...   320   2e-87
sp|P49397|RS3A_ORYSJ 40S ribosomal protein S3a OS=Oryza sativa s...   313   3e-85
sp|P49396|RS3A_BRARA 40S ribosomal protein S3a OS=Brassica rapa ...   310   4e-84
sp|Q9XEG7|RS3A_TORRU 40S ribosomal protein S3a OS=Tortula rurali...   284   2e-76
sp|Q642T2|RS3A_XENTR 40S ribosomal protein S3a OS=Xenopus tropic...   246   4e-65
sp|O73813|RS3A_ORYLA 40S ribosomal protein S3a OS=Oryzias latipe...   246   4e-65
sp|Q801S3|RS3A_XENLA 40S ribosomal protein S3a OS=Xenopus laevis...   246   5e-65
sp|P61247|RS3A_HUMAN 40S ribosomal protein S3a OS=Homo sapiens G...   246   5e-65
sp|P61246|RS3A_FELCA 40S ribosomal protein S3a (Fragment) OS=Fel...   246   5e-65
sp|Q56JV9|RS3A_BOVIN 40S ribosomal protein S3a OS=Bos taurus GN=...   246   5e-65
sp|Q6PBY1|RS3A_DANRE 40S ribosomal protein S3a OS=Danio rerio GN...   246   7e-65
sp|Q4T8S6|RS3A_TETNG 40S ribosomal protein S3a OS=Tetraodon nigr...   245   1e-64
sp|P49242|RS3A_RAT 40S ribosomal protein S3a OS=Rattus norvegicu...   245   1e-64
sp|Q98TX2|RS3A_OPHHA 40S ribosomal protein S3a OS=Ophiophagus ha...   245   1e-64
sp|P97351|RS3A_MOUSE 40S ribosomal protein S3a OS=Mus musculus G...   245   1e-64
sp|Q6DV02|RS3A_GECJA 40S ribosomal protein S3a OS=Gecko japonicu...   245   1e-64
sp|Q4R4Z6|RS3A_MACFA 40S ribosomal protein S3a OS=Macaca fascicu...   244   2e-64
sp|P40910|RS3A_CANAL 40S ribosomal protein S3aE OS=Candida albic...   243   3e-64
sp|O43999|RS3A_EIMTE 40S ribosomal protein S3a OS=Eimeria tenell...   243   4e-64
sp|Q09781|RS3A_SCHPO 40S ribosomal protein S3aE-A OS=Schizosacch...   231   2e-60
sp|P49395|RS3A_APLCA 40S ribosomal protein S3a OS=Aplysia califo...   231   2e-60
sp|P23248|RS3B_YEAST 40S ribosomal protein S1-B OS=Saccharomyces...   230   4e-60
sp|O94438|RS3B_SCHPO 40S ribosomal protein S3aE-B OS=Schizosacch...   230   4e-60
sp|P33442|RS3A_YEAST 40S ribosomal protein S1-A OS=Saccharomyces...   229   9e-60
sp|P48154|RS3A_CAEEL 40S ribosomal protein S3a OS=Caenorhabditis...   214   2e-55
sp|P52813|RS3A_ANOGA 40S ribosomal protein S3a OS=Anopheles gamb...   208   1e-53
sp|P55830|RS3A_DROME 40S ribosomal protein S3a OS=Drosophila mel...   202   9e-52

>sp|P49198|RS3A_HELAN 40S ribosomal protein S3a OS=Helianthus annuus
           GN=RPS3A PE=2 SV=2
          Length = 260

 Score =  323 bits (827), Expect = 4e-88
 Identities = 154/183 (84%), Positives = 175/183 (95%)
 Frame = +3

Query: 3   RVFEVSLADLQNDEDHAPRKIKLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIEA 182
           RVFEVSLADLQNDEDH+ RKI+LRAEDVQGKNVLTNFWGMD TTDKLRSLV+KWQSLIEA
Sbjct: 64  RVFEVSLADLQNDEDHSYRKIRLRAEDVQGKNVLTNFWGMDVTTDKLRSLVKKWQSLIEA 123

Query: 183 HVDVKTTDNYTLRLFCIAFTKKRPNQIKKTCYAQTSQIRQIRKKMIEIMVREAQSCDLKD 362
           HVDVKTTDN+TLR+FCI FTKKR NQ+K+TCYAQ+SQI+QIR+KM EIMV +AQ+CDLK+
Sbjct: 124 HVDVKTTDNFTLRMFCIGFTKKRANQVKRTCYAQSSQIKQIRRKMREIMVTQAQTCDLKE 183

Query: 363 LVAKFIPEAIGKEIEKATAGIYPLQNIYIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKV 542
           LV KFIPE+IG+EIEKAT+ IYPLQN++IRKVKILKAPKFD+GKLMEVHGDYSEDVGVK+
Sbjct: 184 LVQKFIPESIGREIEKATSSIYPLQNVFIRKVKILKAPKFDIGKLMEVHGDYSEDVGVKL 243

Query: 543 ERP 551
           +RP
Sbjct: 244 DRP 246


>sp|Q42262|RS3A2_ARATH 40S ribosomal protein S3a-2 OS=Arabidopsis
           thaliana GN=RPS3AB PE=2 SV=3
          Length = 262

 Score =  323 bits (827), Expect = 4e-88
 Identities = 158/184 (85%), Positives = 176/184 (95%), Gaps = 1/184 (0%)
 Frame = +3

Query: 3   RVFEVSLADLQNDEDHAPRKIKLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIEA 182
           RVFEVSLADLQNDED+A RKI+LRAEDVQG+NVLT FWGMDFTTDKLRSLV+KWQ+LIEA
Sbjct: 64  RVFEVSLADLQNDEDNAYRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTLIEA 123

Query: 183 HVDVKTTDNYTLRLFCIAFTKKRPNQIKKTCYAQTSQIRQIRKKMIEIMVREAQSCDLKD 362
           HVDVKTTD YTLR+FCIAFTK+R NQ+K+TCYAQ+SQIRQIR+KM EIMV+EA SCDLK+
Sbjct: 124 HVDVKTTDGYTLRMFCIAFTKRRANQVKRTCYAQSSQIRQIRRKMSEIMVKEASSCDLKE 183

Query: 363 LVAKFIPEAIGKEIEKATAGIYPLQNIYIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVK 539
           LVAKFIPEAIG+EIEKAT GIYPLQN++IRKVKILKAPKFDLGKLMEVHGDY +EDVGVK
Sbjct: 184 LVAKFIPEAIGREIEKATQGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYTAEDVGVK 243

Query: 540 VERP 551
           V+RP
Sbjct: 244 VDRP 247


>sp|P33444|RS3A_CATRO 40S ribosomal protein S3a OS=Catharanthus
           roseus GN=RPS3A PE=2 SV=3
          Length = 260

 Score =  322 bits (826), Expect = 6e-88
 Identities = 154/183 (84%), Positives = 173/183 (94%)
 Frame = +3

Query: 3   RVFEVSLADLQNDEDHAPRKIKLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIEA 182
           RVFE+SLADLQ DEDH+ RKI+LRAED+QGKNVLTNFWGMDFTTDKLRSLVRKWQSLIEA
Sbjct: 64  RVFEISLADLQGDEDHSFRKIRLRAEDIQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIEA 123

Query: 183 HVDVKTTDNYTLRLFCIAFTKKRPNQIKKTCYAQTSQIRQIRKKMIEIMVREAQSCDLKD 362
           HVDVKTTD+YTLR+FCI FTKKR NQ K+TCYAQ+SQIRQIR+KM EIMV +AQSCDLKD
Sbjct: 124 HVDVKTTDSYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQIRRKMREIMVNQAQSCDLKD 183

Query: 363 LVAKFIPEAIGKEIEKATAGIYPLQNIYIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKV 542
           LV KFIPE+IG+EIEKAT+ IYPLQN++IRKVKILKAPKFDLGKLMEVHGDY+ED+G K+
Sbjct: 184 LVQKFIPESIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYNEDIGTKL 243

Query: 543 ERP 551
           +RP
Sbjct: 244 DRP 246


>sp|Q9CAV0|RS3A1_ARATH 40S ribosomal protein S3a-1 OS=Arabidopsis
           thaliana GN=RPS3AA PE=2 SV=3
          Length = 262

 Score =  320 bits (821), Expect = 2e-87
 Identities = 158/184 (85%), Positives = 175/184 (95%), Gaps = 1/184 (0%)
 Frame = +3

Query: 3   RVFEVSLADLQNDEDHAPRKIKLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIEA 182
           RVFEVSLADLQ DED+A RKI+LRAEDVQG+NVL  FWGMDFTTDKLRSLV+KWQ+LIEA
Sbjct: 64  RVFEVSLADLQGDEDNAYRKIRLRAEDVQGRNVLCQFWGMDFTTDKLRSLVKKWQTLIEA 123

Query: 183 HVDVKTTDNYTLRLFCIAFTKKRPNQIKKTCYAQTSQIRQIRKKMIEIMVREAQSCDLKD 362
           HVDVKTTD+YTLRLFCIAFTK+R NQ+K+TCYAQ+SQIRQIR+KM +IMVREA SCDLKD
Sbjct: 124 HVDVKTTDSYTLRLFCIAFTKRRANQVKRTCYAQSSQIRQIRRKMRDIMVREASSCDLKD 183

Query: 363 LVAKFIPEAIGKEIEKATAGIYPLQNIYIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVK 539
           LVAKFIPEAIG+EIEKAT GIYPLQN++IRKVKILKAPKFDLGKLM+VHGDYS EDVGVK
Sbjct: 184 LVAKFIPEAIGREIEKATQGIYPLQNVFIRKVKILKAPKFDLGKLMDVHGDYSAEDVGVK 243

Query: 540 VERP 551
           V+RP
Sbjct: 244 VDRP 247


>sp|P49397|RS3A_ORYSJ 40S ribosomal protein S3a OS=Oryza sativa
           subsp. japonica GN=RPS3A PE=2 SV=2
          Length = 262

 Score =  313 bits (803), Expect = 3e-85
 Identities = 150/184 (81%), Positives = 170/184 (92%), Gaps = 1/184 (0%)
 Frame = +3

Query: 3   RVFEVSLADLQNDEDHAPRKIKLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIEA 182
           RVFEVSLADLQNDED A RKI+LRAEDVQGKNVLTNFWGM FTTDKLRSLV+KWQ+LIEA
Sbjct: 64  RVFEVSLADLQNDEDQAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVKKWQTLIEA 123

Query: 183 HVDVKTTDNYTLRLFCIAFTKKRPNQIKKTCYAQTSQIRQIRKKMIEIMVREAQSCDLKD 362
           HVDVKTTD Y LRLFCI FTK+RPNQ+K+TCYAQ SQIRQIR+KM+EIM  +A SCDLK+
Sbjct: 124 HVDVKTTDGYMLRLFCIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMANQASSCDLKE 183

Query: 363 LVAKFIPEAIGKEIEKATAGIYPLQNIYIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVK 539
           LV+KFIPE IGKEIEKAT+ I+PLQN+++RKVKILKAPKFDLGKLMEVHGDY+ ED+G K
Sbjct: 184 LVSKFIPEVIGKEIEKATSSIFPLQNVFVRKVKILKAPKFDLGKLMEVHGDYAKEDIGTK 243

Query: 540 VERP 551
           ++RP
Sbjct: 244 LDRP 247


>sp|P49396|RS3A_BRARA 40S ribosomal protein S3a OS=Brassica rapa
           GN=RPS3A PE=2 SV=2
          Length = 262

 Score =  310 bits (793), Expect = 4e-84
 Identities = 154/185 (83%), Positives = 172/185 (92%), Gaps = 2/185 (1%)
 Frame = +3

Query: 3   RVFEVSLADLQNDEDHAPRKIKLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIEA 182
           RVFEVSLADL  DED A RKI+LRAEDVQG+NVLT FWGMDFTTDKLRSLV+KWQ+LIE+
Sbjct: 64  RVFEVSLADLNKDEDQAYRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTLIES 123

Query: 183 HVDVKTTDNYTLRLFCIAFTKKRPNQIKKTCYAQTSQIRQIRKKMIEIMVR-EAQSCDLK 359
           HVDVKTTDNYTLRLFCIAFTK+R NQ+K+TCYAQ+SQIRQIR KM EIM++ EA SCDLK
Sbjct: 124 HVDVKTTDNYTLRLFCIAFTKRRANQVKRTCYAQSSQIRQIRSKMREIMIKEEASSCDLK 183

Query: 360 DLVAKFIPEAIGKEIEKATAGIYPLQNIYIRKVKILKAPKFDLGKLMEVHGDY-SEDVGV 536
           +LVAKFIPE+IGK+IEKAT GIYPLQN++IRKVKILKAPKFDL KLMEVHGDY +EDVGV
Sbjct: 184 ELVAKFIPESIGKDIEKATQGIYPLQNVFIRKVKILKAPKFDLRKLMEVHGDYTAEDVGV 243

Query: 537 KVERP 551
           KV+RP
Sbjct: 244 KVDRP 248


>sp|Q9XEG7|RS3A_TORRU 40S ribosomal protein S3a OS=Tortula ruralis
           GN=RPS3A PE=2 SV=3
          Length = 248

 Score =  284 bits (727), Expect = 2e-76
 Identities = 146/181 (80%), Positives = 163/181 (90%), Gaps = 1/181 (0%)
 Frame = +3

Query: 3   RVFEVSLADLQNDEDHAPRKIKLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIEA 182
           RVFEVSLADLQNDED A RKIKLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQSLI+A
Sbjct: 63  RVFEVSLADLQNDEDQAFRKIKLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIQA 122

Query: 183 HVDVKTTDNYTLRLFCIAFTKKRPNQIKKTCYAQTSQIRQIRKKMIEIMVREAQSCDLKD 362
           HVDVKTTDNY +R+FCIAFTKKRPN   +  YAQ+SQI  IR+KM EIMV+EAQ+CDLK+
Sbjct: 123 HVDVKTTDNYQIRIFCIAFTKKRPNH-TRNFYAQSSQI-AIRRKMREIMVKEAQTCDLKE 180

Query: 363 LVAKFIPEAIGKEIEK-ATAGIYPLQNIYIRKVKILKAPKFDLGKLMEVHGDYSEDVGVK 539
           LVAKFIPE IGKEI++  + GIYPLQ+ +IRKVKILKAPKFDL KLMEVHGDY+E+VG K
Sbjct: 181 LVAKFIPEVIGKEIDEWRSQGIYPLQSTFIRKVKILKAPKFDLMKLMEVHGDYNEEVGAK 240

Query: 540 V 542
           +
Sbjct: 241 I 241


>sp|Q642T2|RS3A_XENTR 40S ribosomal protein S3a OS=Xenopus
           tropicalis GN=rps3a PE=2 SV=3
          Length = 264

 Score =  246 bits (629), Expect = 4e-65
 Identities = 126/189 (66%), Positives = 150/189 (79%), Gaps = 7/189 (3%)
 Frame = +3

Query: 3   RVFEVSLADLQNDEDHAPRKIKLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIEA 182
           RVFEVSLADLQNDE  A RK KL  EDVQGKN LTNF GMD T DK+ S+V+KWQ++IEA
Sbjct: 65  RVFEVSLADLQNDEV-AFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEA 123

Query: 183 HVDVKTTDNYTLRLFCIAFTKKRPNQIKKTCYAQTSQIRQIRKKMIEIMVREAQSCDLKD 362
           HVDVKTTD Y LRLFC+ FTKKR NQI+KT YAQ  Q+RQIRKKM+EIM RE Q+ DLK+
Sbjct: 124 HVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKE 183

Query: 363 LVAKFIPEAIGKEIEKATAGIYPLQNIYIRKVKILKAPKFDLGKLMEVHGD-------YS 521
           +V K IP++IGK+IEKA   IYPL ++Y+RKVK+LK PKF+LGKLME+HG+         
Sbjct: 184 VVNKLIPDSIGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGAGKPAG 243

Query: 522 EDVGVKVER 548
           ++ G KVER
Sbjct: 244 DETGAKVER 252


>sp|O73813|RS3A_ORYLA 40S ribosomal protein S3a OS=Oryzias latipes
           GN=rps3a PE=2 SV=3
          Length = 266

 Score =  246 bits (629), Expect = 4e-65
 Identities = 125/191 (65%), Positives = 150/191 (78%), Gaps = 9/191 (4%)
 Frame = +3

Query: 3   RVFEVSLADLQNDEDHAPRKIKLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIEA 182
           RVFEVSLADLQNDE  A RK KL  EDVQGKN LTNF GMD T DK+ S+V+KWQ++IEA
Sbjct: 65  RVFEVSLADLQNDEV-AFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEA 123

Query: 183 HVDVKTTDNYTLRLFCIAFTKKRPNQIKKTCYAQTSQIRQIRKKMIEIMVREAQSCDLKD 362
           HVDVKTTD Y LRLFC+ FTKKR NQ++KT YAQ  Q+RQIRKKM+EIM RE Q+ DLK+
Sbjct: 124 HVDVKTTDGYLLRLFCVGFTKKRNNQVRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKE 183

Query: 363 LVAKFIPEAIGKEIEKATAGIYPLQNIYIRKVKILKAPKFDLGKLMEVHGD--------- 515
           +V K IP+++GK+IEKA   IYPL ++Y+RKVK+LK PKF+LGKLME+HG+         
Sbjct: 184 VVNKLIPDSVGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGAGGAAKA 243

Query: 516 YSEDVGVKVER 548
             +D G KVER
Sbjct: 244 SGDDTGAKVER 254


>sp|Q801S3|RS3A_XENLA 40S ribosomal protein S3a OS=Xenopus laevis
           GN=rps3a PE=2 SV=3
          Length = 264

 Score =  246 bits (628), Expect = 5e-65
 Identities = 126/189 (66%), Positives = 149/189 (78%), Gaps = 7/189 (3%)
 Frame = +3

Query: 3   RVFEVSLADLQNDEDHAPRKIKLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIEA 182
           RVFEVSLADLQNDE  A RK KL  EDVQGKN LTNF GMD T DK+ S+V+KWQ++IEA
Sbjct: 65  RVFEVSLADLQNDEV-AFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEA 123

Query: 183 HVDVKTTDNYTLRLFCIAFTKKRPNQIKKTCYAQTSQIRQIRKKMIEIMVREAQSCDLKD 362
           HVDVKTTD Y LRLFC+ FTKKR NQI+KT YAQ  Q+RQIRKKM EIM RE Q+ DLK+
Sbjct: 124 HVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMFEIMTREVQTNDLKE 183

Query: 363 LVAKFIPEAIGKEIEKATAGIYPLQNIYIRKVKILKAPKFDLGKLMEVHGD-------YS 521
           +V K IP++IGK+IEKA   IYPL ++Y+RKVK+LK PKF+LGKLME+HG+         
Sbjct: 184 VVNKLIPDSIGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGTGKPAG 243

Query: 522 EDVGVKVER 548
           ++ G KVER
Sbjct: 244 DETGAKVER 252
tr_hit_id A9TFE1
Definition tr|A9TFE1|A9TFE1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 183
Score (bit) 334.0
E-value 2.0e-90
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946138|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0011_J16, 5'
         (553 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TFE1|A9TFE1_PHYPA Predicted protein OS=Physcomitrella paten...   334   2e-90
tr|A9S3W8|A9S3W8_PHYPA Predicted protein OS=Physcomitrella paten...   332   6e-90
tr|A9SLV9|A9SLV9_PHYPA Predicted protein OS=Physcomitrella paten...   330   2e-89
tr|A9SHV3|A9SHV3_PHYPA Predicted protein OS=Physcomitrella paten...   330   2e-89
tr|A9PAJ6|A9PAJ6_POPTR Putative uncharacterized protein OS=Popul...   330   4e-89
tr|A9NNV8|A9NNV8_PICSI Putative uncharacterized protein OS=Picea...   330   4e-89
tr|A9T7N1|A9T7N1_PHYPA Predicted protein OS=Physcomitrella paten...   329   5e-89
tr|A9RMS0|A9RMS0_PHYPA Predicted protein OS=Physcomitrella paten...   329   5e-89
tr|Q2XPX2|Q2XPX2_SOLTU 40S ribosomal protein S3a-like protein OS...   324   2e-87
tr|A0N0S0|A0N0S0_9ASPA RPS3 OS=Cymbidium hybrid cultivar PE=2 SV=1    324   2e-87
tr|Q0INR5|Q0INR5_ORYSJ Os12g0406200 protein OS=Oryza sativa subs...   323   4e-87
tr|B8BP92|B8BP92_ORYSI Putative uncharacterized protein OS=Oryza...   323   4e-87
tr|A3CGN4|A3CGN4_ORYSJ Putative uncharacterized protein OS=Oryza...   323   4e-87
tr|Q285L8|Q285L8_TOBAC Cyc07 OS=Nicotiana tabacum PE=2 SV=1           323   5e-87
tr|B7FLW8|B7FLW8_MEDTR Putative uncharacterized protein OS=Medic...   322   1e-86
tr|A9PAH0|A9PAH0_POPTR Putative uncharacterized protein OS=Popul...   322   1e-86
tr|A7NWS5|A7NWS5_VITVI Chromosome chr5 scaffold_2, whole genome ...   320   2e-86
tr|A5B4K1|A5B4K1_VITVI Putative uncharacterized protein OS=Vitis...   320   2e-86
tr|Q2XPX9|Q2XPX9_SOLTU Cyc07-like protein OS=Solanum tuberosum P...   320   3e-86
tr|Q2XPW5|Q2XPW5_SOLTU Cyc07-like protein OS=Solanum tuberosum P...   320   4e-86
tr|Q2XPV8|Q2XPV8_SOLTU Cyc07-like protein OS=Solanum tuberosum P...   320   4e-86
tr|Q2VCH9|Q2VCH9_SOLTU 40S ribosomal protein S3a-like OS=Solanum...   320   4e-86
tr|Q6K8B8|Q6K8B8_ORYSJ Os02g0287000 protein OS=Oryza sativa subs...   317   2e-85
tr|B6UG10|B6UG10_MAIZE 40S ribosomal protein S3a OS=Zea mays PE=...   317   2e-85
tr|B6TAQ5|B6TAQ5_MAIZE 40S ribosomal protein S3a OS=Zea mays PE=...   317   2e-85
tr|B4FAV3|B4FAV3_MAIZE Putative uncharacterized protein OS=Zea m...   317   2e-85
tr|A3A5M8|A3A5M8_ORYSJ Putative uncharacterized protein OS=Oryza...   317   2e-85
tr|A2X3J5|A2X3J5_ORYSI Putative uncharacterized protein OS=Oryza...   317   2e-85
tr|Q8GTE3|Q8GTE3_CICAR Ribosomal protein S3a OS=Cicer arietinum ...   317   3e-85
tr|A9PHL2|A9PHL2_POPTR Putative uncharacterized protein OS=Popul...   317   3e-85

>tr|A9TFE1|A9TFE1_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_169774 PE=3 SV=1
          Length = 269

 Score =  334 bits (856), Expect = 2e-90
 Identities = 166/183 (90%), Positives = 173/183 (94%)
 Frame = +3

Query: 3   RVFEVSLADLQNDEDHAPRKIKLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIEA 182
           RVFEVSLADLQNDED A RKIKLRAEDVQGKNVLTNFWGMD TTDKLRSLVRKWQSLIEA
Sbjct: 70  RVFEVSLADLQNDEDQAFRKIKLRAEDVQGKNVLTNFWGMDLTTDKLRSLVRKWQSLIEA 129

Query: 183 HVDVKTTDNYTLRLFCIAFTKKRPNQIKKTCYAQTSQIRQIRKKMIEIMVREAQSCDLKD 362
           HVDVKTTDNY +R+FCIAFTKKRPNQIKKTCYAQTSQIRQIR+KM EIMVREAQSCDLK+
Sbjct: 130 HVDVKTTDNYMIRMFCIAFTKKRPNQIKKTCYAQTSQIRQIRRKMREIMVREAQSCDLKE 189

Query: 363 LVAKFIPEAIGKEIEKATAGIYPLQNIYIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKV 542
           LVAKFIPE IGKEIEKAT GIYPLQN +IRKVKILKAPKFDL KLMEVHGDYSE+VG K+
Sbjct: 190 LVAKFIPEVIGKEIEKATQGIYPLQNTFIRKVKILKAPKFDLMKLMEVHGDYSEEVGAKI 249

Query: 543 ERP 551
           ERP
Sbjct: 250 ERP 252


>tr|A9S3W8|A9S3W8_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_162682 PE=3 SV=1
          Length = 263

 Score =  332 bits (852), Expect = 6e-90
 Identities = 165/183 (90%), Positives = 173/183 (94%)
 Frame = +3

Query: 3   RVFEVSLADLQNDEDHAPRKIKLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIEA 182
           RVFEVSLADLQNDED A RKIKLRAEDVQGKNVLTNFWGMD TTDKLRSLVRKWQSLIEA
Sbjct: 64  RVFEVSLADLQNDEDQAFRKIKLRAEDVQGKNVLTNFWGMDLTTDKLRSLVRKWQSLIEA 123

Query: 183 HVDVKTTDNYTLRLFCIAFTKKRPNQIKKTCYAQTSQIRQIRKKMIEIMVREAQSCDLKD 362
           HVDVKTTDNY +R+FCIAFTKKRPNQIKKTCYAQ+SQIRQIR+KM EIMVREAQSCDLK+
Sbjct: 124 HVDVKTTDNYQIRMFCIAFTKKRPNQIKKTCYAQSSQIRQIRRKMREIMVREAQSCDLKE 183

Query: 363 LVAKFIPEAIGKEIEKATAGIYPLQNIYIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKV 542
           LVAKFIPE IGKEIEKAT GIYPLQN +IRKVKILKAPKFDL KLMEVHGDYSE+VG K+
Sbjct: 184 LVAKFIPEVIGKEIEKATQGIYPLQNTFIRKVKILKAPKFDLMKLMEVHGDYSEEVGAKI 243

Query: 543 ERP 551
           ERP
Sbjct: 244 ERP 246


>tr|A9SLV9|A9SLV9_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_233661 PE=3 SV=1
          Length = 263

 Score =  330 bits (847), Expect = 2e-89
 Identities = 164/183 (89%), Positives = 172/183 (93%)
 Frame = +3

Query: 3   RVFEVSLADLQNDEDHAPRKIKLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIEA 182
           RVFEVSLADLQNDED A RKIKLRAEDVQGKNVLTNFWGMD TTDKLRSLVRKWQSLIEA
Sbjct: 64  RVFEVSLADLQNDEDQAFRKIKLRAEDVQGKNVLTNFWGMDLTTDKLRSLVRKWQSLIEA 123

Query: 183 HVDVKTTDNYTLRLFCIAFTKKRPNQIKKTCYAQTSQIRQIRKKMIEIMVREAQSCDLKD 362
           HVDVKTTDNY LR+FCIAFTKKRPNQIKKTCYAQ+SQIRQIR+KM EIM +EAQSCDLK+
Sbjct: 124 HVDVKTTDNYQLRIFCIAFTKKRPNQIKKTCYAQSSQIRQIRRKMREIMTKEAQSCDLKE 183

Query: 363 LVAKFIPEAIGKEIEKATAGIYPLQNIYIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKV 542
           LV KFIPEAIGKEIEKAT GIYPLQN +IRKVKILKAPKFDL KLMEVHGDYSE+VG K+
Sbjct: 184 LVGKFIPEAIGKEIEKATQGIYPLQNTFIRKVKILKAPKFDLMKLMEVHGDYSEEVGAKI 243

Query: 543 ERP 551
           ERP
Sbjct: 244 ERP 246


>tr|A9SHV3|A9SHV3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_212515 PE=3 SV=1
          Length = 259

 Score =  330 bits (847), Expect = 2e-89
 Identities = 164/183 (89%), Positives = 172/183 (93%)
 Frame = +3

Query: 3   RVFEVSLADLQNDEDHAPRKIKLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIEA 182
           RVFEVSLADLQNDED A RKIKLRAEDVQGKNVLTNFWGMD TTDKLRSLVRKWQSLIE+
Sbjct: 64  RVFEVSLADLQNDEDQAFRKIKLRAEDVQGKNVLTNFWGMDLTTDKLRSLVRKWQSLIES 123

Query: 183 HVDVKTTDNYTLRLFCIAFTKKRPNQIKKTCYAQTSQIRQIRKKMIEIMVREAQSCDLKD 362
           HVDVKTTDNY LR+FCIAFTKKRPNQIKKTCYAQ+SQIRQIR+KM EIM REAQSCDLK+
Sbjct: 124 HVDVKTTDNYMLRIFCIAFTKKRPNQIKKTCYAQSSQIRQIRRKMREIMTREAQSCDLKE 183

Query: 363 LVAKFIPEAIGKEIEKATAGIYPLQNIYIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKV 542
           LVAKFIPE IGKEIEKAT GIYPLQN +IRKVKILKAPKFDL KLMEVHGDYSE+VG K+
Sbjct: 184 LVAKFIPEVIGKEIEKATQGIYPLQNTFIRKVKILKAPKFDLMKLMEVHGDYSEEVGAKI 243

Query: 543 ERP 551
           ERP
Sbjct: 244 ERP 246


>tr|A9PAJ6|A9PAJ6_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 261

 Score =  330 bits (845), Expect = 4e-89
 Identities = 158/183 (86%), Positives = 174/183 (95%)
 Frame = +3

Query: 3   RVFEVSLADLQNDEDHAPRKIKLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIEA 182
           RVFEVSLADLQNDEDHA RKI+LRAEDVQG+NVLTNFWGM FTTDKLRSLVRKWQ+LIEA
Sbjct: 64  RVFEVSLADLQNDEDHAFRKIRLRAEDVQGRNVLTNFWGMSFTTDKLRSLVRKWQTLIEA 123

Query: 183 HVDVKTTDNYTLRLFCIAFTKKRPNQIKKTCYAQTSQIRQIRKKMIEIMVREAQSCDLKD 362
           HVDVKTTDNYTLR+FCIAFTK+ PNQ+K+TCYAQ+SQIRQIR+KM EIMV +A SCDLKD
Sbjct: 124 HVDVKTTDNYTLRMFCIAFTKRCPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKD 183

Query: 363 LVAKFIPEAIGKEIEKATAGIYPLQNIYIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKV 542
           LV KFIPE IGKEIEKAT GIYPLQN++IRKVKILKAPKFDLGKLMEVHGDYS+D+GVK+
Sbjct: 184 LVQKFIPEVIGKEIEKATTGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSQDIGVKI 243

Query: 543 ERP 551
           +RP
Sbjct: 244 DRP 246


>tr|A9NNV8|A9NNV8_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 245

 Score =  330 bits (845), Expect = 4e-89
 Identities = 159/182 (87%), Positives = 175/182 (96%)
 Frame = +3

Query: 3   RVFEVSLADLQNDEDHAPRKIKLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIEA 182
           RVFE+SLADLQNDED A RKIKLRAEDVQG+NVLTNFWGMDFTTDKLRSLVRKWQ+LIEA
Sbjct: 48  RVFELSLADLQNDEDQAFRKIKLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTLIEA 107

Query: 183 HVDVKTTDNYTLRLFCIAFTKKRPNQIKKTCYAQTSQIRQIRKKMIEIMVREAQSCDLKD 362
           HVDVKTTD+YTLR+FCI FTK+RPNQ+K+TCYAQ+SQIRQIR+KM EIM+REA SCDLK+
Sbjct: 108 HVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMTEIMIREASSCDLKE 167

Query: 363 LVAKFIPEAIGKEIEKATAGIYPLQNIYIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKV 542
           LVAKFIPE IGKEIEKAT+ IYPLQN++IRKVKILKAPKFDLGKLMEVHGDYSEDVGVKV
Sbjct: 168 LVAKFIPEVIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKV 227

Query: 543 ER 548
           +R
Sbjct: 228 DR 229


>tr|A9T7N1|A9T7N1_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_219678 PE=3 SV=1
          Length = 264

 Score =  329 bits (844), Expect = 5e-89
 Identities = 163/183 (89%), Positives = 172/183 (93%)
 Frame = +3

Query: 3   RVFEVSLADLQNDEDHAPRKIKLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIEA 182
           RVFEVSLADLQNDED A RKIKLRAEDVQGKNVLTNFWGMD TTDKLRSLVRKWQSLIEA
Sbjct: 64  RVFEVSLADLQNDEDQAFRKIKLRAEDVQGKNVLTNFWGMDLTTDKLRSLVRKWQSLIEA 123

Query: 183 HVDVKTTDNYTLRLFCIAFTKKRPNQIKKTCYAQTSQIRQIRKKMIEIMVREAQSCDLKD 362
           HVDVKTTDNY LR+FCIAFTKKRPNQIKKTCYAQ+SQIRQIR+KM EIM REAQ+CDLK+
Sbjct: 124 HVDVKTTDNYQLRIFCIAFTKKRPNQIKKTCYAQSSQIRQIRRKMREIMTREAQTCDLKE 183

Query: 363 LVAKFIPEAIGKEIEKATAGIYPLQNIYIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKV 542
           LVAKFIPE IGKEIEKAT GIYPLQN +IRKVKILKAPKFDL KLMEVHGDYSE+VG K+
Sbjct: 184 LVAKFIPEVIGKEIEKATQGIYPLQNTFIRKVKILKAPKFDLMKLMEVHGDYSEEVGAKI 243

Query: 543 ERP 551
           +RP
Sbjct: 244 DRP 246


>tr|A9RMS0|A9RMS0_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_204003 PE=3 SV=1
          Length = 265

 Score =  329 bits (844), Expect = 5e-89
 Identities = 163/183 (89%), Positives = 172/183 (93%)
 Frame = +3

Query: 3   RVFEVSLADLQNDEDHAPRKIKLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIEA 182
           RVFEVSLADLQNDED A RKIKLRAEDVQGKNVLTNFWGMD TTDKLRSLVRKWQSLIEA
Sbjct: 64  RVFEVSLADLQNDEDQAFRKIKLRAEDVQGKNVLTNFWGMDLTTDKLRSLVRKWQSLIEA 123

Query: 183 HVDVKTTDNYTLRLFCIAFTKKRPNQIKKTCYAQTSQIRQIRKKMIEIMVREAQSCDLKD 362
           HVDVKTTDNY LR+FCIAFTKKRPNQIKKTCYAQ+SQIRQIR+KM EIM +EAQ+CDLK+
Sbjct: 124 HVDVKTTDNYQLRIFCIAFTKKRPNQIKKTCYAQSSQIRQIRRKMREIMTKEAQTCDLKE 183

Query: 363 LVAKFIPEAIGKEIEKATAGIYPLQNIYIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKV 542
           LVAKFIPE IGKEIEKAT GIYPLQN +IRKVKILKAPKFDL KLMEVHGDYSE+VG K+
Sbjct: 184 LVAKFIPEVIGKEIEKATQGIYPLQNTFIRKVKILKAPKFDLMKLMEVHGDYSEEVGAKI 243

Query: 543 ERP 551
           ERP
Sbjct: 244 ERP 246


>tr|Q2XPX2|Q2XPX2_SOLTU 40S ribosomal protein S3a-like protein
           OS=Solanum tuberosum PE=2 SV=1
          Length = 260

 Score =  324 bits (831), Expect = 2e-87
 Identities = 158/183 (86%), Positives = 175/183 (95%)
 Frame = +3

Query: 3   RVFEVSLADLQNDEDHAPRKIKLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIEA 182
           RVFEVSLADLQNDEDH+ RKI+LRAEDVQG+NVLTNF GMDFTTDKLRSLV+KWQSLIEA
Sbjct: 64  RVFEVSLADLQNDEDHSFRKIRLRAEDVQGRNVLTNFHGMDFTTDKLRSLVKKWQSLIEA 123

Query: 183 HVDVKTTDNYTLRLFCIAFTKKRPNQIKKTCYAQTSQIRQIRKKMIEIMVREAQSCDLKD 362
           HVDVKTTD+YTLR+FCI FTKKRPNQ K+TCYAQ+SQIRQIR+KM EIMV +AQSCDLKD
Sbjct: 124 HVDVKTTDSYTLRMFCIGFTKKRPNQQKRTCYAQSSQIRQIRRKMREIMVNQAQSCDLKD 183

Query: 363 LVAKFIPEAIGKEIEKATAGIYPLQNIYIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKV 542
           LV KFIPE+IG+EIEKAT+ IYPLQN++IRKVKILKAPKFDLG+LMEVHGDYSEDVGVKV
Sbjct: 184 LVLKFIPESIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGRLMEVHGDYSEDVGVKV 243

Query: 543 ERP 551
           +RP
Sbjct: 244 DRP 246


>tr|A0N0S0|A0N0S0_9ASPA RPS3 OS=Cymbidium hybrid cultivar PE=2 SV=1
          Length = 261

 Score =  324 bits (831), Expect = 2e-87
 Identities = 155/183 (84%), Positives = 170/183 (92%)
 Frame = +3

Query: 3   RVFEVSLADLQNDEDHAPRKIKLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIEA 182
           RVFE+SLADLQNDED + RKI+LRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQ+LIEA
Sbjct: 64  RVFEISLADLQNDEDQSYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEA 123

Query: 183 HVDVKTTDNYTLRLFCIAFTKKRPNQIKKTCYAQTSQIRQIRKKMIEIMVREAQSCDLKD 362
           H+DVKTTDNYTLRLFCI FTK+RPNQ+K+TCYAQTSQIRQIR+KM EIM  +A SCDLK+
Sbjct: 124 HIDVKTTDNYTLRLFCIGFTKRRPNQVKRTCYAQTSQIRQIRRKMREIMTNQASSCDLKE 183

Query: 363 LVAKFIPEAIGKEIEKATAGIYPLQNIYIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKV 542
           LV KFIPE IGKEIEKAT  IYPLQN++IRKVKILKAPKFDLGKLMEVHGDY ED GVK+
Sbjct: 184 LVQKFIPEVIGKEIEKATTSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYKEDFGVKL 243

Query: 543 ERP 551
           +RP
Sbjct: 244 DRP 246