| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK946176|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0011_L15, 5'
(227 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q12NC2|THIC_SHEDO Thiamine biosynthesis protein thiC OS=Shewa... 31 1.7
sp|P10690|PSBR_SPIOL Photosystem II 10 kDa polypeptide, chloropl... 31 1.7
sp|P06183|PSBR_SOLTU Photosystem II 10 kDa polypeptide, chloropl... 31 1.7
sp|Q40163|PSBR_SOLLC Photosystem II 10 kDa polypeptide, chloropl... 31 1.7
sp|P49108|PSBR_BRACM Photosystem II 10 kDa polypeptide, chloropl... 31 1.7
sp|P27202|PSBR_ARATH Photosystem II 10 kDa polypeptide, chloropl... 31 1.7
sp|Q40519|PSBR_TOBAC Photosystem II 10 kDa polypeptide, chloropl... 30 5.0
sp|Q6AXP3|CO033_RAT Uncharacterized protein C15orf33 homolog OS=... 29 8.5
>sp|Q12NC2|THIC_SHEDO Thiamine biosynthesis protein thiC
OS=Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013) GN=thiC PE=3 SV=1
Length = 686
Score = 31.2 bits (69), Expect = 1.7
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3
Query: 222 SQGATLFHSHDCQNIQGNR*DMEDA*CVRI 133
SQG+ L+HS D I N+ D +DA VR+
Sbjct: 650 SQGSALYHSIDSSGINDNKNDQQDASVVRV 679
>sp|P10690|PSBR_SPIOL Photosystem II 10 kDa polypeptide,
chloroplastic OS=Spinacia oleracea GN=PSBR PE=2 SV=1
Length = 140
Score = 31.2 bits (69), Expect = 1.7
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +3
Query: 51 IGGGALLVYNTSALAQ 98
+ GGALLVYNTSALAQ
Sbjct: 125 LAGGALLVYNTSALAQ 140
>sp|P06183|PSBR_SOLTU Photosystem II 10 kDa polypeptide,
chloroplastic OS=Solanum tuberosum GN=PSBR PE=2 SV=1
Length = 138
Score = 31.2 bits (69), Expect = 1.7
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +3
Query: 51 IGGGALLVYNTSALAQ 98
+ GGALLVYNTSALAQ
Sbjct: 123 LAGGALLVYNTSALAQ 138
>sp|Q40163|PSBR_SOLLC Photosystem II 10 kDa polypeptide,
chloroplastic OS=Solanum lycopersicum GN=PSBR PE=2 SV=1
Length = 138
Score = 31.2 bits (69), Expect = 1.7
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +3
Query: 51 IGGGALLVYNTSALAQ 98
+ GGALLVYNTSALAQ
Sbjct: 123 LAGGALLVYNTSALAQ 138
>sp|P49108|PSBR_BRACM Photosystem II 10 kDa polypeptide,
chloroplastic OS=Brassica campestris GN=PSBR PE=2 SV=1
Length = 141
Score = 31.2 bits (69), Expect = 1.7
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +3
Query: 51 IGGGALLVYNTSALAQ 98
+ GGALLVYNTSALAQ
Sbjct: 126 LAGGALLVYNTSALAQ 141
>sp|P27202|PSBR_ARATH Photosystem II 10 kDa polypeptide,
chloroplastic OS=Arabidopsis thaliana GN=PSBR PE=1 SV=1
Length = 140
Score = 31.2 bits (69), Expect = 1.7
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +3
Query: 51 IGGGALLVYNTSALAQ 98
+ GGALLVYNTSALAQ
Sbjct: 125 LAGGALLVYNTSALAQ 140
>sp|Q40519|PSBR_TOBAC Photosystem II 10 kDa polypeptide,
chloroplastic OS=Nicotiana tabacum GN=PSBR PE=2 SV=1
Length = 136
Score = 29.6 bits (65), Expect = 5.0
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 51 IGGGALLVYNTSALAQ 98
+ GGALLV+NTSALAQ
Sbjct: 121 LAGGALLVFNTSALAQ 136
>sp|Q6AXP3|CO033_RAT Uncharacterized protein C15orf33 homolog
OS=Rattus norvegicus PE=2 SV=2
Length = 573
Score = 28.9 bits (63), Expect = 8.5
Identities = 10/35 (28%), Positives = 23/35 (65%)
Frame = -1
Query: 218 KELHFFILMTVRIYKAIGETWKTHSVSEFRIHLIN 114
K+++ ++L T + + + + WKTH +S+ I L++
Sbjct: 158 KQIYLYVLRTHNLEEKVFKVWKTHILSDCSIALLH 192
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