BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946186|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0011_M03, 5'
         (407 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q90XB7|NOD2B_XENLA Nodal homolog 2-B (Fragment) OS=Xenopus la...    30   4.8  
sp|Q09760|CUL3_SCHPO Cullin-3 OS=Schizosaccharomyces pombe GN=cu...    29   8.2  

>sp|Q90XB7|NOD2B_XENLA Nodal homolog 2-B (Fragment) OS=Xenopus
           laevis GN=nodal2-B PE=2 SV=1
          Length = 384

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = +1

Query: 19  VLTESAAW*SDESMSSRDKAAKTTCVLRTAPSTMISAPHCFFLLKLSCFNYIKW 180
           V++ES    +D     R++  K T ++ T PS     P C  +  +  F  IKW
Sbjct: 267 VMSESTVRVADARRHRRNQKTKNTIIMNTIPSRSAGNPLCRRVDMIVDFEKIKW 320


>sp|Q09760|CUL3_SCHPO Cullin-3 OS=Schizosaccharomyces pombe GN=cul3
           PE=1 SV=2
          Length = 785

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = -2

Query: 148 IKKNNGVLISWLMALCAAHTWSSQLYPVMTWTRHSTTLPTLSAPWLELD 2
           I+KN+    SW  +L AAH + S L  V +W  H  ++  +S+    LD
Sbjct: 101 IRKNDSYSTSWSRSLEAAHRFLSSL--VNSWKDHIVSMQMISSVLKYLD 147

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946186|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0011_M03, 5'
         (407 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B4M8E3|B4M8E3_DROVI GJ16618 OS=Drosophila virilis GN=GJ16618 ...    34   3.2  
tr|Q3ETA6|Q3ETA6_BACTI Putative uncharacterized protein OS=Bacil...    33   5.5  
tr|B7FEZ0|B7FEZ0_9MUSC Aldehyde reductase (Fragment) OS=Drosophi...    33   5.5  
tr|B5DSP9|B5DSP9_DROPS GA23131 OS=Drosophila pseudoobscura pseud...    33   5.5  
tr|B4HAR4|B4HAR4_DROPE GL15622 OS=Drosophila persimilis GN=GL156...    33   5.5  
tr|B6HXT2|B6HXT2_9HIV1 Viral protein U (Fragment) OS=HIV-1 M:CRF...    33   7.2  

>tr|B4M8E3|B4M8E3_DROVI GJ16618 OS=Drosophila virilis GN=GJ16618
           PE=4 SV=1
          Length = 463

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -2

Query: 148 IKKNNGVLISWLMALCAAHTWSSQLYPVMTWTRHSTTL 35
           +K   GVL+ WL+ LC   T +S   P ++ T H TT+
Sbjct: 7   LKDPTGVLLLWLLWLCPTATSTSTFLPKVSCTEHDTTI 44


>tr|Q3ETA6|Q3ETA6_BACTI Putative uncharacterized protein OS=Bacillus
           thuringiensis serovar israelensis ATCC 35646
           GN=RBTH_04511 PE=4 SV=1
          Length = 73

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 20/71 (28%), Positives = 35/71 (49%)
 Frame = +2

Query: 8   LEPWC*QSRQRGRVTSPCHHGIKLRRPRVCCAQRHQP*YQHPIVFFY*SFRVSTILNGLF 187
           + P+C ++R  G V +   HG +     V  A +H P YQHP + +Y + +    +   +
Sbjct: 2   INPYCIKNRAIGSVYTT--HGAQSTMHAVYHAMQHMPYYQHPAIPYYETIQYHPSIE--Y 57

Query: 188 EPQELVHTLAT 220
            PQ +  T+ T
Sbjct: 58  TPQSIYPTIFT 68


>tr|B7FEZ0|B7FEZ0_9MUSC Aldehyde reductase (Fragment) OS=Drosophila
           pseudoobscura GN=ARY PE=4 SV=1
          Length = 361

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 19/58 (32%), Positives = 31/58 (53%)
 Frame = -1

Query: 365 TYHDDQDXEVWGTCEAMPNIVGIHIMSLYLIALSVGHESDQLHSCNSVL*PMCELALE 192
           T+HD +D  V   CE    ++G   + LYL+   VG++    H C+ +L PM +  L+
Sbjct: 99  THHDPRD--VRRICEQQLKLLGFTYIDLYLLHFPVGYK----HMCDEILKPMSDGKLQ 150


>tr|B5DSP9|B5DSP9_DROPS GA23131 OS=Drosophila pseudoobscura
           pseudoobscura GN=GA23131 PE=4 SV=1
          Length = 379

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 19/58 (32%), Positives = 31/58 (53%)
 Frame = -1

Query: 365 TYHDDQDXEVWGTCEAMPNIVGIHIMSLYLIALSVGHESDQLHSCNSVL*PMCELALE 192
           T+HD +D  V   CE    ++G   + LYL+   VG++    H C+ +L PM +  L+
Sbjct: 117 THHDPRD--VRRICEQQLKLLGFTYIDLYLLHFPVGYK----HMCDEILKPMSDGKLQ 168


>tr|B4HAR4|B4HAR4_DROPE GL15622 OS=Drosophila persimilis GN=GL15622
           PE=4 SV=1
          Length = 379

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 19/58 (32%), Positives = 31/58 (53%)
 Frame = -1

Query: 365 TYHDDQDXEVWGTCEAMPNIVGIHIMSLYLIALSVGHESDQLHSCNSVL*PMCELALE 192
           T+HD +D  V   CE    ++G   + LYL+   VG++    H C+ +L PM +  L+
Sbjct: 117 THHDPRD--VRRICEQQLKLLGFTYIDLYLLHFPVGYK----HMCDEILKPMSDGKLQ 168


>tr|B6HXT2|B6HXT2_9HIV1 Viral protein U (Fragment) OS=HIV-1 M:CRF02
           K1227 GN=vpu PE=4 SV=1
          Length = 67

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -2

Query: 133 GVLISWLMALCAAHT-WSSQLYPVMTWTRHSTTL 35
           G LI WLM +C A+  W +  Y V  WT   TTL
Sbjct: 15  GTLIFWLMMICNANNLWVTVYYGVPVWTXADTTL 48