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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK946228
Clone id YMU02A01NGRL0011_O13
Library
Length 503
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0011_O13. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
AAAGCAGTGGTATCAACGCAGAGTGGCCATTACGGCCGGGGAACTCTCTGTCTTGTGCAC
TCGCTGATCATCTCTAGACCGGCAGTAGCAATGGCGAGCTCTGTGGCTTCTTTGGCAGTT
GCTGCTCCCTCGTGCGCCCCGGCAGAGAGCCTATCTAAGAGCTTCTCCGGCCTCAGGCCC
ACTACCCTCGCTGCCCCCAAGAGCGCCAACCCGCTCTCCATCTCCAACGGCAGCCGCGTG
AGCGCCATGCTTGTGTGGAAGCCGTATGACAACAAGAAGTTCGAGACTCTGTCCTACTTG
CCGCCTTTGACAAGCGAGCAGATTGCGAAGCAGGTGGACTTCATGGTCCGGAAGGGCTGG
ACCCCCTGCATTGAGTTCGACAAAATCGGAAGCGTATACCGAGAGCACTTCCATGGCAGC
GGCTACTACGATGGGCGATACTGGGTGATGTGGAAGTTGCCCATGTTTGGCTGCCAAGAT
GCCGCCGCTGTGCTGCGTGAAAT
■■Homology search results ■■ -
sp_hit_id O64416
Definition sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Marchantia paleacea
Align length 112
Score (bit) 144.0
E-value 2.0e-34
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946228|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0011_O13, 5'
         (463 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...   144   2e-34
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   143   4e-34
sp|Q41373|RBS_SACHY Ribulose bisphosphate carboxylase small chai...   142   7e-34
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai...   142   7e-34
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   142   7e-34
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   142   7e-34
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   141   2e-33
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   140   2e-33
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   139   6e-33
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   138   1e-32
sp|P29684|RBS_HEVBR Ribulose bisphosphate carboxylase small chai...   138   1e-32
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   138   1e-32
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...   138   1e-32
sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   137   2e-32
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai...   137   2e-32
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai...   137   2e-32
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   137   2e-32
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha...   137   2e-32
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   137   2e-32
sp|P07689|RBS3_PEA Ribulose bisphosphate carboxylase small chain...   137   3e-32
sp|P00869|RBS2_PEA Ribulose bisphosphate carboxylase small chain...   137   3e-32
sp|Q0INY7|RBS1_ORYSJ Ribulose bisphosphate carboxylase small cha...   136   4e-32
sp|A2Y205|RBS1_ORYSI Ribulose bisphosphate carboxylase small cha...   136   4e-32
sp|P12468|RBS4_SOYBN Ribulose bisphosphate carboxylase small cha...   136   5e-32
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   135   6e-32
sp|Q42915|RBS_MANES Ribulose bisphosphate carboxylase small chai...   135   8e-32
sp|P18566|RBS2_ORYSJ Ribulose bisphosphate carboxylase small cha...   135   8e-32
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai...   135   1e-31
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   135   1e-31
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai...   134   1e-31

>sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Marchantia paleacea GN=RBCS PE=2 SV=1
          Length = 180

 Score =  144 bits (363), Expect = 2e-34
 Identities = 64/112 (57%), Positives = 81/112 (72%)
 Frame = +3

Query: 126 SGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQVDFM 305
           +GL+             + +NGSRVS M VW+PY+N KFETLSYLPPL+ + +AKQ+D++
Sbjct: 32  AGLKAGVFGGKSEWQTKTQTNGSRVSCMQVWEPYNNLKFETLSYLPPLSQDALAKQIDYV 91

Query: 306 VRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLRE 461
           ++ GW PCIEFD  G+V RE     GYYDGRYW MWKLPMFGC D+A+VLRE
Sbjct: 92  IKSGWAPCIEFDVQGTVTREGSTMPGYYDGRYWTMWKLPMFGCTDSASVLRE 143


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  143 bits (360), Expect = 4e-34
 Identities = 61/93 (65%), Positives = 73/93 (78%)
 Frame = +3

Query: 183 SNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 362
           SNG RV  M VW P   KKFETLSYLPPLT EQ+ ++VD+++R GW PCIEF K+G VYR
Sbjct: 49  SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVDYLIRNGWIPCIEFCKVGFVYR 108

Query: 363 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLRE 461
           E+ +  GYYDGRYW MWKLPMFGC D++ VL+E
Sbjct: 109 EYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKE 141


>sp|Q41373|RBS_SACHY Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Saccharum hybrid GN=RBCS PE=3 SV=1
          Length = 168

 Score =  142 bits (358), Expect = 7e-34
 Identities = 65/116 (56%), Positives = 79/116 (68%), Gaps = 3/116 (2%)
 Frame = +3

Query: 123 FSGLRPTT---LAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQ 293
           F GL+ T    +A   + +   +SNG R+  M VW  Y NKKFETLSYLPPLT EQ+ KQ
Sbjct: 16  FQGLKSTASLPVARRSTTSLAKVSNGGRIRCMQVWPAYGNKKFETLSYLPPLTQEQLLKQ 75

Query: 294 VDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLRE 461
           VD+++R  W PC+EF K G VYRE+     YYDGRYW MWKLPMFGC DA+ V +E
Sbjct: 76  VDYLLRNNWVPCLEFSKEGFVYRENSTSPCYYDGRYWTMWKLPMFGCTDASQVYKE 131


>sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zea mays GN=RBCS PE=1 SV=1
          Length = 170

 Score =  142 bits (358), Expect = 7e-34
 Identities = 65/116 (56%), Positives = 82/116 (70%), Gaps = 3/116 (2%)
 Frame = +3

Query: 123 FSGLRPTTL--AAPKSANPL-SISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQ 293
           F GL+ T     A +S+  L ++SNG R+  M VW  Y NKKFETLSYLPPL+++ + KQ
Sbjct: 17  FQGLKSTASLPVARRSSRSLGNVSNGGRIRCMQVWPAYGNKKFETLSYLPPLSTDDLLKQ 76

Query: 294 VDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLRE 461
           VD+++R GW PC+EF K+G VYRE+     YYDGRYW MWKLPMFGC DA  V +E
Sbjct: 77  VDYLLRNGWIPCLEFSKVGFVYRENSTSPCYYDGRYWTMWKLPMFGCNDATQVYKE 132


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
          Length = 177

 Score =  142 bits (358), Expect = 7e-34
 Identities = 70/117 (59%), Positives = 82/117 (70%), Gaps = 4/117 (3%)
 Frame = +3

Query: 123 FSGLRPTTL--AAPKSANPLSI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAK 290
           F+GLR +    A  K+ N LS   SNG RVS M VW P   KKFETLSYLPPL+ E +AK
Sbjct: 26  FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 291 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLRE 461
           +VD+++R  W PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC DA+ V+ E
Sbjct: 86  EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAE 142


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
          Length = 177

 Score =  142 bits (358), Expect = 7e-34
 Identities = 70/117 (59%), Positives = 82/117 (70%), Gaps = 4/117 (3%)
 Frame = +3

Query: 123 FSGLRPTTL--AAPKSANPLSI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAK 290
           F+GLR +    A  K+ N LS   SNG RVS M VW P   KKFETLSYLPPL+ E +AK
Sbjct: 26  FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 291 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLRE 461
           +VD+++R  W PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC DA+ V+ E
Sbjct: 86  EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAE 142


>sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU26, chloroplastic OS=Lemna gibba GN=SSU26 PE=3 SV=1
          Length = 177

 Score =  141 bits (355), Expect = 2e-33
 Identities = 69/118 (58%), Positives = 82/118 (69%), Gaps = 5/118 (4%)
 Frame = +3

Query: 123 FSGLR-----PTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIA 287
           F+GLR     P T  A K+ + L  SNG +VS M VW P   KKFETLSYLPPL+ E +A
Sbjct: 26  FNGLRSSVAFPATRKANKNLSTLP-SNGGKVSCMQVWPPEGLKKFETLSYLPPLSVEDLA 84

Query: 288 KQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLRE 461
           K+VD+++R  W PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC DA+ V+ E
Sbjct: 85  KEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAE 142


>sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Hordeum vulgare PE=2 SV=1
          Length = 174

 Score =  140 bits (354), Expect = 2e-33
 Identities = 63/116 (54%), Positives = 80/116 (68%), Gaps = 3/116 (2%)
 Frame = +3

Query: 123 FSGLRPTT---LAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQ 293
           F GL+ T    ++   +A+  S+SNG R+  M VW     KKFETLSYLPPL++E + KQ
Sbjct: 16  FQGLKSTAGLPVSRRSNASSASVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQ 75

Query: 294 VDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLRE 461
           VD+++R  W PC+EF K+G ++REH    GYYDGRYW MWKLPMFGC DA  VL E
Sbjct: 76  VDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNE 131


>sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU40B, chloroplastic OS=Lemna gibba GN=SSU40B PE=3 SV=1
          Length = 177

 Score =  139 bits (350), Expect = 6e-33
 Identities = 66/106 (62%), Positives = 76/106 (71%), Gaps = 2/106 (1%)
 Frame = +3

Query: 150 AAPKSANPLSI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQVDFMVRKGWT 323
           A  K+ N LS   SNG RVS M VW P   KKFETLSYLPPL+ E +AK+VD+++R  W 
Sbjct: 37  ATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWV 96

Query: 324 PCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLRE 461
           PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC DA+ V+ E
Sbjct: 97  PCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAE 142


>sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1
          Length = 183

 Score =  138 bits (348), Expect = 1e-32
 Identities = 67/117 (57%), Positives = 85/117 (72%), Gaps = 4/117 (3%)
 Frame = +3

Query: 123 FSGLRPTTL--AAPKSANPLSI-SNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQ 293
           F+GL+ ++      KS +  SI SNG RV  M VW P   KKFETLSYLPPL+SE +AK+
Sbjct: 30  FNGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSESLAKE 89

Query: 294 VDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLRE 461
           VD+++RK W PC+EF+ + G VYRE+    GYYDGRYW MWKLPMFGC D++ VL+E
Sbjct: 90  VDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKE 146
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 117
Score (bit) 222.0
E-value 8.0e-57
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946228|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0011_O13, 5'
         (463 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   222   8e-57
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   159   8e-38
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   157   2e-37
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   154   2e-36
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   152   6e-36
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   150   3e-35
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   150   4e-35
tr|A9U380|A9U380_PHYPA Ribulose bisphosphate carboxylase small c...   150   4e-35
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c...   143   5e-33
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...   143   5e-33
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c...   142   6e-33
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c...   142   6e-33
tr|Q9ZWG6|Q9ZWG6_HORVU Ribulose bisphosphate carboxylase small c...   142   8e-33
tr|B6RHQ3|B6RHQ3_9POAL Chloroplast ribulose-1,5-bisphosphate car...   142   8e-33
tr|B4FSJ3|B4FSJ3_MAIZE Putative uncharacterized protein OS=Zea m...   142   8e-33
tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small c...   142   1e-32
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c...   141   1e-32
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   141   1e-32
tr|Q9SAW5|Q9SAW5_WHEAT Ribulose bisphosphate carboxylase small c...   140   2e-32
tr|Q9S7N3|Q9S7N3_AEGLO Ribulose bisphosphate carboxylase small c...   140   2e-32
tr|Q9ZSS0|Q9ZSS0_9POAL Ribulose bisphosphate carboxylase small c...   140   3e-32
tr|Q9SDY9|Q9SDY9_9POAL Ribulose bisphosphate carboxylase small c...   140   3e-32
tr|Q9SBU5|Q9SBU5_9POAL Ribulose bisphosphate carboxylase small c...   140   3e-32
tr|Q9SAX5|Q9SAX5_AEGSP Ribulose bisphosphate carboxylase small c...   140   3e-32
tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c...   140   3e-32
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c...   140   3e-32
tr|Q9SNZ6|Q9SNZ6_9POAL Ribulose bisphosphate carboxylase small c...   140   4e-32
tr|Q9SAX2|Q9SAX2_9POAL Ribulose bisphosphate carboxylase small c...   140   4e-32
tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c...   140   4e-32
tr|Q9SDY8|Q9SDY8_9POAL Ribulose bisphosphate carboxylase small c...   139   5e-32

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  222 bits (565), Expect = 8e-57
 Identities = 100/117 (85%), Positives = 110/117 (94%)
 Frame = +3

Query: 111 LSKSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAK 290
           LSKSFSGL+  TL APK ANPL+ISNGSR+SAMLVWKPYDNKKFETLSYLPPLT++QIAK
Sbjct: 22  LSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQIAK 81

Query: 291 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLRE 461
           QV++MVRKGWTPCIEFD IGSVYREHFHGSGYYDGRYW+MWKLPMFGC D+ +VLRE
Sbjct: 82  QVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLRE 138


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  159 bits (401), Expect = 8e-38
 Identities = 76/118 (64%), Positives = 87/118 (73%), Gaps = 3/118 (2%)
 Frame = +3

Query: 117 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 296
           K FSGL+ TTL+A K+    S+ NGSRV  M VW P    KFET SYLPPLT +QIAKQV
Sbjct: 27  KQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 297 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLRE 461
           DFM+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D+A VLRE
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLRE 144


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  157 bits (398), Expect = 2e-37
 Identities = 76/118 (64%), Positives = 86/118 (72%), Gaps = 3/118 (2%)
 Frame = +3

Query: 117 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 296
           K FSGL+ TTL A K+    S+ NGSRV  M VW P    KFET SYLPPLT +QIAKQV
Sbjct: 27  KQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 297 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLRE 461
           DFM+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D+A VLRE
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLRE 144


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score =  154 bits (389), Expect = 2e-36
 Identities = 72/118 (61%), Positives = 87/118 (73%), Gaps = 3/118 (2%)
 Frame = +3

Query: 117 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 296
           K+FSGL+P TL + K+    ++ NGSRV  M VW P    KFET SYLPPLT +QIAKQV
Sbjct: 32  KAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 91

Query: 297 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLRE 461
           D+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++ VLRE
Sbjct: 92  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLRE 149


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  152 bits (385), Expect = 6e-36
 Identities = 72/118 (61%), Positives = 86/118 (72%), Gaps = 3/118 (2%)
 Frame = +3

Query: 117 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 296
           K+FSGL+  TL + K+    S+ NGSRV  M VW P    KFET SYLPPLT +QIAKQV
Sbjct: 62  KAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 121

Query: 297 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLRE 461
           D+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++ VLRE
Sbjct: 122 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLRE 179


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_225236 PE=3 SV=1
          Length = 183

 Score =  150 bits (379), Expect = 3e-35
 Identities = 70/118 (59%), Positives = 86/118 (72%), Gaps = 3/118 (2%)
 Frame = +3

Query: 117 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 296
           K+FSGL+  TL + ++    S+ NGSRV  M VW P    KFET SYLPPLT ++IAKQV
Sbjct: 31  KAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQV 90

Query: 297 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLRE 461
           D+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++ VLRE
Sbjct: 91  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLRE 148


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
           PE=2 SV=1
          Length = 184

 Score =  150 bits (378), Expect = 4e-35
 Identities = 70/118 (59%), Positives = 85/118 (72%), Gaps = 3/118 (2%)
 Frame = +3

Query: 117 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 296
           K+FSGL+  TL   KS    S+ NGSRV  M VW P    KFET SYLPPL+ +QIA+QV
Sbjct: 32  KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 91

Query: 297 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLRE 461
           D+M+++   PCIEFD +G+V R +F G   SGYYDGRYW MWKLPMFGC D++ VLRE
Sbjct: 92  DYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLRE 149


>tr|A9U380|A9U380_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_8310 PE=3 SV=1
          Length = 156

 Score =  150 bits (378), Expect = 4e-35
 Identities = 70/118 (59%), Positives = 85/118 (72%), Gaps = 3/118 (2%)
 Frame = +3

Query: 117 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 296
           K+FSGL+  TL   KS    S+ NGSRV  M VW P    KFET SYLPPL+ +QIA+QV
Sbjct: 36  KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 95

Query: 297 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLRE 461
           D+M+++   PCIEFD +G+V R +F G   SGYYDGRYW MWKLPMFGC D++ VLRE
Sbjct: 96  DYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLRE 153


>tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_115069 PE=3 SV=1
          Length = 181

 Score =  143 bits (360), Expect = 5e-33
 Identities = 65/115 (56%), Positives = 81/115 (70%)
 Frame = +3

Query: 117 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 296
           K+FSGL+  T+ + K+ N  S+ NGSRV  M VW P    KFET SYLPPL+ + IAKQV
Sbjct: 32  KAFSGLKSATVFSGKAQNSSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 297 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLRE 461
           ++M+++   PC+EFD    V R +    GYYDGRYW MWKLPMFGCQD+A VLRE
Sbjct: 92  EYMIQQKLIPCLEFDNANGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDSAQVLRE 146


>tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small
           chain OS=Populus trichocarpa PE=2 SV=1
          Length = 170

 Score =  143 bits (360), Expect = 5e-33
 Identities = 58/95 (61%), Positives = 75/95 (78%)
 Frame = +3

Query: 177 SISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQVDFMVRKGWTPCIEFDKIGSV 356
           ++SNGS+   M  W P +NKKFE LSYLPPL+ + IAK++D+M++KGW PC+EFD++GSV
Sbjct: 40  TVSNGSKTFCMKTWNPINNKKFEALSYLPPLSEDSIAKEIDYMMKKGWIPCLEFDEVGSV 99

Query: 357 YREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLRE 461
            REH    GYYDGRYW +WKLPMFGC D++ VL E
Sbjct: 100 RREHSRMPGYYDGRYWTLWKLPMFGCTDSSQVLEE 134