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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK946229
Clone id YMU02A01NGRL0011_O14
Library
Length 465
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0011_O14. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
AGAGCTCCAGATTAGCAGAGCAAAGGGAGAGTGATTGTACGCAGTATTCAGTATGGCCAT
CTCCATAGCCGCTTCCTCGGCAGTTGTCGCTCCTAGCTGCGCCCCCGCAGAGAGCTTGTC
AAAGAGCTTCTCTGGTCTCAAGGCCACTACCCTGTTCGCCCCCAAGAGCCCCAACCCGCT
CGCCATCTCTAATGGCAGCCGTGTGAGCGCCATGCTTGTGTGGAAGCCGTATGACAACAA
GAAGTTCGAGACTCTGTCCTACTTGCCGCCTTTGTCAAGTGAGCAGATTGCGAAGCAGGT
GGACTTCATGGTCCGAAAAGGCTGGACCCCTTGCATTGAGTTCGACAAAATCGGGAGCGT
GTACCGAGAGCACTTCCACGGCAGCGGCTACTACGATGGGCGGTACTGGGTGATGTGGAA
GCTGCCCATGTTTGGCTGCCAAGATGCCGCTGCTGTGCTGCGTGA
■■Homology search results ■■ -
sp_hit_id O64416
Definition sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Marchantia paleacea
Align length 111
Score (bit) 144.0
E-value 1.0e-34
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946229|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0011_O14, 5'
         (465 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...   144   1e-34
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai...   142   7e-34
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   142   9e-34
sp|Q41373|RBS_SACHY Ribulose bisphosphate carboxylase small chai...   141   2e-33
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai...   141   2e-33
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   141   2e-33
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   141   2e-33
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   140   2e-33
sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   139   6e-33
sp|P29684|RBS_HEVBR Ribulose bisphosphate carboxylase small chai...   139   8e-33
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   138   1e-32
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   137   2e-32
sp|P07689|RBS3_PEA Ribulose bisphosphate carboxylase small chain...   137   2e-32
sp|P00869|RBS2_PEA Ribulose bisphosphate carboxylase small chain...   137   2e-32
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   137   2e-32
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   137   2e-32
sp|P26573|RBS8_NICPL Ribulose bisphosphate carboxylase small cha...   137   3e-32
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   137   3e-32
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...   137   3e-32
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai...   136   5e-32
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   136   5e-32
sp|O22077|RBS_FAGCR Ribulose bisphosphate carboxylase small chai...   135   9e-32
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha...   135   9e-32
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai...   135   1e-31
sp|Q42915|RBS_MANES Ribulose bisphosphate carboxylase small chai...   135   1e-31
sp|Q42823|RBS_GLYTA Ribulose bisphosphate carboxylase small chai...   135   1e-31
sp|P12468|RBS4_SOYBN Ribulose bisphosphate carboxylase small cha...   135   1e-31
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   134   1e-31
sp|P00865|RBS1_SOYBN Ribulose bisphosphate carboxylase small cha...   134   1e-31
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   134   1e-31

>sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Marchantia paleacea GN=RBCS PE=2 SV=1
          Length = 180

 Score =  144 bits (364), Expect = 1e-34
 Identities = 66/111 (59%), Positives = 80/111 (72%)
 Frame = +2

Query: 131 SGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFM 310
           +GLKA              +NGSRVS M VW+PY+N KFETLSYLPPLS + +AKQ+D++
Sbjct: 32  AGLKAGVFGGKSEWQTKTQTNGSRVSCMQVWEPYNNLKFETLSYLPPLSQDALAKQIDYV 91

Query: 311 VRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLR 463
           ++ GW PCIEFD  G+V RE     GYYDGRYW MWKLPMFGC D+A+VLR
Sbjct: 92  IKSGWAPCIEFDVQGTVTREGSTMPGYYDGRYWTMWKLPMFGCTDSASVLR 142


>sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zea mays GN=RBCS PE=1 SV=1
          Length = 170

 Score =  142 bits (358), Expect = 7e-34
 Identities = 66/115 (57%), Positives = 80/115 (69%), Gaps = 3/115 (2%)
 Frame = +2

Query: 128 FSGLKATTLF--APKSPNPLA-ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 298
           F GLK+T     A +S   L  +SNG R+  M VW  Y NKKFETLSYLPPLS++ + KQ
Sbjct: 17  FQGLKSTASLPVARRSSRSLGNVSNGGRIRCMQVWPAYGNKKFETLSYLPPLSTDDLLKQ 76

Query: 299 VDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLR 463
           VD+++R GW PC+EF K+G VYRE+     YYDGRYW MWKLPMFGC DA  V +
Sbjct: 77  VDYLLRNGWIPCLEFSKVGFVYRENSTSPCYYDGRYWTMWKLPMFGCNDATQVYK 131


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  142 bits (357), Expect = 9e-34
 Identities = 65/113 (57%), Positives = 79/113 (69%)
 Frame = +2

Query: 125 SFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVD 304
           S +    T  FA  S  P   SNG RV  M VW P   KKFETLSYLPPL+ EQ+ ++VD
Sbjct: 31  SSAAFPVTRKFADSSKLP---SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVD 87

Query: 305 FMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLR 463
           +++R GW PCIEF K+G VYRE+ +  GYYDGRYW MWKLPMFGC D++ VL+
Sbjct: 88  YLIRNGWIPCIEFCKVGFVYREYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLK 140


>sp|Q41373|RBS_SACHY Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Saccharum hybrid GN=RBCS PE=3 SV=1
          Length = 168

 Score =  141 bits (355), Expect = 2e-33
 Identities = 67/115 (58%), Positives = 80/115 (69%), Gaps = 3/115 (2%)
 Frame = +2

Query: 128 FSGLKATTLF--APKSPNPLA-ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 298
           F GLK+T     A +S   LA +SNG R+  M VW  Y NKKFETLSYLPPL+ EQ+ KQ
Sbjct: 16  FQGLKSTASLPVARRSTTSLAKVSNGGRIRCMQVWPAYGNKKFETLSYLPPLTQEQLLKQ 75

Query: 299 VDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLR 463
           VD+++R  W PC+EF K G VYRE+     YYDGRYW MWKLPMFGC DA+ V +
Sbjct: 76  VDYLLRNNWVPCLEFSKEGFVYRENSTSPCYYDGRYWTMWKLPMFGCTDASQVYK 130


>sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Capsicum annuum GN=RBCS PE=2 SV=1
          Length = 187

 Score =  141 bits (355), Expect = 2e-33
 Identities = 66/117 (56%), Positives = 81/117 (69%), Gaps = 5/117 (4%)
 Frame = +2

Query: 125 SFSGLKATTLFAPKSPNPLAI----SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIA 292
           SF+GLK+   F       L I    SNG RV  MLVW P + KK+ETLSYLP LS EQ+ 
Sbjct: 25  SFNGLKSAASFPVTRKQDLDITSIASNGGRVECMLVWPPINKKKYETLSYLPDLSDEQLL 84

Query: 293 KQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVL 460
           K+++++++KGW PC+EF+ + G VYREH    GYYDGRYW MWKLPMFGC DA  VL
Sbjct: 85  KEIEYLLQKGWVPCLEFETEHGFVYREHHRSPGYYDGRYWTMWKLPMFGCTDATQVL 141


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
          Length = 177

 Score =  141 bits (355), Expect = 2e-33
 Identities = 68/115 (59%), Positives = 82/115 (71%), Gaps = 4/115 (3%)
 Frame = +2

Query: 128 FSGLKATTLFAP--KSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 295
           F+GL+++  F    K+ N L+   SNG RVS M VW P   KKFETLSYLPPLS E +AK
Sbjct: 26  FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 296 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVL 460
           +VD+++R  W PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC DA+ V+
Sbjct: 86  EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVI 140


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
          Length = 177

 Score =  141 bits (355), Expect = 2e-33
 Identities = 68/115 (59%), Positives = 82/115 (71%), Gaps = 4/115 (3%)
 Frame = +2

Query: 128 FSGLKATTLFAP--KSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 295
           F+GL+++  F    K+ N L+   SNG RVS M VW P   KKFETLSYLPPLS E +AK
Sbjct: 26  FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 296 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVL 460
           +VD+++R  W PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC DA+ V+
Sbjct: 86  EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVI 140


>sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1
          Length = 183

 Score =  140 bits (354), Expect = 2e-33
 Identities = 68/116 (58%), Positives = 86/116 (74%), Gaps = 4/116 (3%)
 Frame = +2

Query: 128 FSGLKATTLF--APKSPNPLAI-SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 298
           F+GLK+++ F    KS +  +I SNG RV  M VW P   KKFETLSYLPPLSSE +AK+
Sbjct: 30  FNGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSESLAKE 89

Query: 299 VDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLR 463
           VD+++RK W PC+EF+ + G VYRE+    GYYDGRYW MWKLPMFGC D++ VL+
Sbjct: 90  VDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLK 145


>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  139 bits (350), Expect = 6e-33
 Identities = 65/121 (53%), Positives = 84/121 (69%), Gaps = 5/121 (4%)
 Frame = +2

Query: 116 LSKSFSGLKATTLF--APKSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSE 283
           L+  F+GLK+   F    K+ N  +   SNG RV  M VW P   KK+ETLSYLPPLS E
Sbjct: 22  LAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDE 81

Query: 284 QIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVL 460
            ++K++D+++R  W PC+EF+ + G VYREH H  GYYDGRYW MWKLPMFGC D+A V+
Sbjct: 82  ALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVM 141

Query: 461 R 463
           +
Sbjct: 142 K 142


>sp|P29684|RBS_HEVBR Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Hevea brasiliensis GN=RBCS PE=2 SV=1
          Length = 183

 Score =  139 bits (349), Expect = 8e-33
 Identities = 65/117 (55%), Positives = 82/117 (70%), Gaps = 5/117 (4%)
 Frame = +2

Query: 128 FSGLKATTLFAPKSPNPLAI----SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 295
           F+GLK+T+ F         I    SNG RV  M VW P   K +ETLSYLPPL+ EQ+AK
Sbjct: 28  FTGLKSTSAFPTTRKTTTDITSIASNGGRVQCMQVWPPRGKKFYETLSYLPPLTREQLAK 87

Query: 296 QVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLR 463
           +V++++RKGW PC+EF+ + G+VYRE+    GYYDGRYW MWKLPMFGC DA  VL+
Sbjct: 88  EVEYLLRKGWVPCLEFELEHGTVYREYHRSPGYYDGRYWTMWKLPMFGCTDAVQVLQ 144
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 116
Score (bit) 224.0
E-value 2.0e-57
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946229|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0011_O14, 5'
         (465 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   224   2e-57
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   157   2e-37
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   154   2e-36
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   153   5e-36
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   153   5e-36
tr|A9U380|A9U380_PHYPA Ribulose bisphosphate carboxylase small c...   153   5e-36
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   153   5e-36
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   150   2e-35
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c...   146   6e-34
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c...   145   7e-34
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c...   145   7e-34
tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c...   143   4e-33
tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c...   143   5e-33
tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c...   142   6e-33
tr|B4FSJ3|B4FSJ3_MAIZE Putative uncharacterized protein OS=Zea m...   142   8e-33
tr|A9SRS0|A9SRS0_PHYPA Ribulose bisphosphate carboxylase small c...   142   1e-32
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...   142   1e-32
tr|A9S8M9|A9S8M9_PHYPA Ribulose bisphosphate carboxylase small c...   141   1e-32
tr|A9S8M6|A9S8M6_PHYPA Ribulose bisphosphate carboxylase small c...   141   1e-32
tr|Q6RWD8|Q6RWD8_CAPAN Ribulose bisphosphate carboxylase small c...   141   2e-32
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   141   2e-32
tr|A9U4X8|A9U4X8_PHYPA Ribulose bisphosphate carboxylase small c...   140   2e-32
tr|A9U4X7|A9U4X7_PHYPA Ribulose bisphosphate carboxylase small c...   140   2e-32
tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small c...   140   2e-32
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c...   140   3e-32
tr|O24574|O24574_MAIZE Ribulose bisphosphate carboxylase small c...   140   4e-32
tr|A9SCN2|A9SCN2_PHYPA Ribulose bisphosphate carboxylase small c...   140   4e-32
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c...   139   5e-32
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   139   5e-32
tr|B6RHQ3|B6RHQ3_9POAL Chloroplast ribulose-1,5-bisphosphate car...   139   7e-32

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  224 bits (570), Expect = 2e-57
 Identities = 101/116 (87%), Positives = 110/116 (94%)
 Frame = +2

Query: 116 LSKSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 295
           LSKSFSGLKA TLFAPK  NPLAISNGSR+SAMLVWKPYDNKKFETLSYLPPL+++QIAK
Sbjct: 22  LSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQIAK 81

Query: 296 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLR 463
           QV++MVRKGWTPCIEFD IGSVYREHFHGSGYYDGRYW+MWKLPMFGC D+ +VLR
Sbjct: 82  QVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLR 137


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  157 bits (398), Expect = 2e-37
 Identities = 75/117 (64%), Positives = 87/117 (74%), Gaps = 3/117 (2%)
 Frame = +2

Query: 122 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 301
           K FSGLK+TTLFA K+    ++ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 27  KQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 302 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLR 463
           DFM+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D+A VLR
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLR 143


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  154 bits (390), Expect = 2e-36
 Identities = 74/117 (63%), Positives = 86/117 (73%), Gaps = 3/117 (2%)
 Frame = +2

Query: 122 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 301
           K FSGLK+TTL A K+    ++ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 27  KQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 302 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLR 463
           DFM+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D+A VLR
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLR 143


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  153 bits (386), Expect = 5e-36
 Identities = 71/117 (60%), Positives = 87/117 (74%), Gaps = 3/117 (2%)
 Frame = +2

Query: 122 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 301
           K+FSGLK+ TLF+ K+    ++ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 62  KAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 121

Query: 302 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLR 463
           D+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++ VLR
Sbjct: 122 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLR 178


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
           PE=2 SV=1
          Length = 184

 Score =  153 bits (386), Expect = 5e-36
 Identities = 71/117 (60%), Positives = 86/117 (73%), Gaps = 3/117 (2%)
 Frame = +2

Query: 122 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 301
           K+FSGLK+ TLF  KS    ++ NGSRV  M VW P    KFET SYLPPLS +QIA+QV
Sbjct: 32  KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 91

Query: 302 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLR 463
           D+M+++   PCIEFD +G+V R +F G   SGYYDGRYW MWKLPMFGC D++ VLR
Sbjct: 92  DYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLR 148


>tr|A9U380|A9U380_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_8310 PE=3 SV=1
          Length = 156

 Score =  153 bits (386), Expect = 5e-36
 Identities = 71/117 (60%), Positives = 86/117 (73%), Gaps = 3/117 (2%)
 Frame = +2

Query: 122 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 301
           K+FSGLK+ TLF  KS    ++ NGSRV  M VW P    KFET SYLPPLS +QIA+QV
Sbjct: 36  KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 95

Query: 302 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLR 463
           D+M+++   PCIEFD +G+V R +F G   SGYYDGRYW MWKLPMFGC D++ VLR
Sbjct: 96  DYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLR 152


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score =  153 bits (386), Expect = 5e-36
 Identities = 72/117 (61%), Positives = 86/117 (73%), Gaps = 3/117 (2%)
 Frame = +2

Query: 122 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 301
           K+FSGLK  TLF+ K+    A+ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 32  KAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 91

Query: 302 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLR 463
           D+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++ VLR
Sbjct: 92  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLR 148


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_225236 PE=3 SV=1
          Length = 183

 Score =  150 bits (380), Expect = 2e-35
 Identities = 69/117 (58%), Positives = 87/117 (74%), Gaps = 3/117 (2%)
 Frame = +2

Query: 122 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 301
           K+FSGLK+ TLF+ ++    ++ NGSRV  M VW P    KFET SYLPPL+ ++IAKQV
Sbjct: 31  KAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQV 90

Query: 302 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLR 463
           D+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++ VLR
Sbjct: 91  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLR 147


>tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_115069 PE=3 SV=1
          Length = 181

 Score =  146 bits (368), Expect = 6e-34
 Identities = 66/114 (57%), Positives = 82/114 (71%)
 Frame = +2

Query: 122 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 301
           K+FSGLK+ T+F+ K+ N  ++ NGSRV  M VW P    KFET SYLPPLS + IAKQV
Sbjct: 32  KAFSGLKSATVFSGKAQNSSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 302 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLR 463
           ++M+++   PC+EFD    V R +    GYYDGRYW MWKLPMFGCQD+A VLR
Sbjct: 92  EYMIQQKLIPCLEFDNANGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDSAQVLR 145


>tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_146969 PE=3 SV=1
          Length = 181

 Score =  145 bits (367), Expect = 7e-34
 Identities = 67/114 (58%), Positives = 82/114 (71%)
 Frame = +2

Query: 122 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 301
           K+FSGLK++TLF+ K+ +  ++ NGSRV  M VW P    KFET SYLPPLS + IAKQV
Sbjct: 32  KAFSGLKSSTLFSSKAQSLSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 302 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLR 463
           D+M+++   PC+EFD    V R +    GYYDGRYW MWKLPMFGCQD A VLR
Sbjct: 92  DYMIQQKLIPCLEFDNADGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDPAQVLR 145