DK946229
Clone id YMU02A01NGRL0011_O14
Library
Length 465
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0011_O14. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
AGAGCTCCAGATTAGCAGAGCAAAGGGAGAGTGATTGTACGCAGTATTCAGTATGGCCAT
CTCCATAGCCGCTTCCTCGGCAGTTGTCGCTCCTAGCTGCGCCCCCGCAGAGAGCTTGTC
AAAGAGCTTCTCTGGTCTCAAGGCCACTACCCTGTTCGCCCCCAAGAGCCCCAACCCGCT
CGCCATCTCTAATGGCAGCCGTGTGAGCGCCATGCTTGTGTGGAAGCCGTATGACAACAA
GAAGTTCGAGACTCTGTCCTACTTGCCGCCTTTGTCAAGTGAGCAGATTGCGAAGCAGGT
GGACTTCATGGTCCGAAAAGGCTGGACCCCTTGCATTGAGTTCGACAAAATCGGGAGCGT
GTACCGAGAGCACTTCCACGGCAGCGGCTACTACGATGGGCGGTACTGGGTGATGTGGAA
GCTGCCCATGTTTGGCTGCCAAGATGCCGCTGCTGTGCTGCGTGA
■■Homology search results ■■ -
sp_hit_id O64416
Definition sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Marchantia paleacea
Align length 111
Score (bit) 144.0
E-value 1.0e-34
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946229|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0011_O14, 5'
(465 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai... 144 1e-34
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai... 142 7e-34
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai... 142 9e-34
sp|Q41373|RBS_SACHY Ribulose bisphosphate carboxylase small chai... 141 2e-33
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai... 141 2e-33
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha... 141 2e-33
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha... 141 2e-33
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai... 140 2e-33
sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai... 139 6e-33
sp|P29684|RBS_HEVBR Ribulose bisphosphate carboxylase small chai... 139 8e-33
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha... 138 1e-32
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai... 137 2e-32
sp|P07689|RBS3_PEA Ribulose bisphosphate carboxylase small chain... 137 2e-32
sp|P00869|RBS2_PEA Ribulose bisphosphate carboxylase small chain... 137 2e-32
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha... 137 2e-32
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai... 137 2e-32
sp|P26573|RBS8_NICPL Ribulose bisphosphate carboxylase small cha... 137 3e-32
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha... 137 3e-32
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha... 137 3e-32
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai... 136 5e-32
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha... 136 5e-32
sp|O22077|RBS_FAGCR Ribulose bisphosphate carboxylase small chai... 135 9e-32
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha... 135 9e-32
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai... 135 1e-31
sp|Q42915|RBS_MANES Ribulose bisphosphate carboxylase small chai... 135 1e-31
sp|Q42823|RBS_GLYTA Ribulose bisphosphate carboxylase small chai... 135 1e-31
sp|P12468|RBS4_SOYBN Ribulose bisphosphate carboxylase small cha... 135 1e-31
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai... 134 1e-31
sp|P00865|RBS1_SOYBN Ribulose bisphosphate carboxylase small cha... 134 1e-31
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch... 134 1e-31

>sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Marchantia paleacea GN=RBCS PE=2 SV=1
Length = 180

Score = 144 bits (364), Expect = 1e-34
Identities = 66/111 (59%), Positives = 80/111 (72%)
Frame = +2

Query: 131 SGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFM 310
+GLKA +NGSRVS M VW+PY+N KFETLSYLPPLS + +AKQ+D++
Sbjct: 32 AGLKAGVFGGKSEWQTKTQTNGSRVSCMQVWEPYNNLKFETLSYLPPLSQDALAKQIDYV 91

Query: 311 VRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLR 463
++ GW PCIEFD G+V RE GYYDGRYW MWKLPMFGC D+A+VLR
Sbjct: 92 IKSGWAPCIEFDVQGTVTREGSTMPGYYDGRYWTMWKLPMFGCTDSASVLR 142


>sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Zea mays GN=RBCS PE=1 SV=1
Length = 170

Score = 142 bits (358), Expect = 7e-34
Identities = 66/115 (57%), Positives = 80/115 (69%), Gaps = 3/115 (2%)
Frame = +2

Query: 128 FSGLKATTLF--APKSPNPLA-ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 298
F GLK+T A +S L +SNG R+ M VW Y NKKFETLSYLPPLS++ + KQ
Sbjct: 17 FQGLKSTASLPVARRSSRSLGNVSNGGRIRCMQVWPAYGNKKFETLSYLPPLSTDDLLKQ 76

Query: 299 VDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLR 463
VD+++R GW PC+EF K+G VYRE+ YYDGRYW MWKLPMFGC DA V +
Sbjct: 77 VDYLLRNGWIPCLEFSKVGFVYRENSTSPCYYDGRYWTMWKLPMFGCNDATQVYK 131


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
SV=1
Length = 178

Score = 142 bits (357), Expect = 9e-34
Identities = 65/113 (57%), Positives = 79/113 (69%)
Frame = +2

Query: 125 SFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVD 304
S + T FA S P SNG RV M VW P KKFETLSYLPPL+ EQ+ ++VD
Sbjct: 31 SSAAFPVTRKFADSSKLP---SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVD 87

Query: 305 FMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLR 463
+++R GW PCIEF K+G VYRE+ + GYYDGRYW MWKLPMFGC D++ VL+
Sbjct: 88 YLIRNGWIPCIEFCKVGFVYREYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLK 140


>sp|Q41373|RBS_SACHY Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Saccharum hybrid GN=RBCS PE=3 SV=1
Length = 168

Score = 141 bits (355), Expect = 2e-33
Identities = 67/115 (58%), Positives = 80/115 (69%), Gaps = 3/115 (2%)
Frame = +2

Query: 128 FSGLKATTLF--APKSPNPLA-ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 298
F GLK+T A +S LA +SNG R+ M VW Y NKKFETLSYLPPL+ EQ+ KQ
Sbjct: 16 FQGLKSTASLPVARRSTTSLAKVSNGGRIRCMQVWPAYGNKKFETLSYLPPLTQEQLLKQ 75

Query: 299 VDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLR 463
VD+++R W PC+EF K G VYRE+ YYDGRYW MWKLPMFGC DA+ V +
Sbjct: 76 VDYLLRNNWVPCLEFSKEGFVYRENSTSPCYYDGRYWTMWKLPMFGCTDASQVYK 130


>sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Capsicum annuum GN=RBCS PE=2 SV=1
Length = 187

Score = 141 bits (355), Expect = 2e-33
Identities = 66/117 (56%), Positives = 81/117 (69%), Gaps = 5/117 (4%)
Frame = +2

Query: 125 SFSGLKATTLFAPKSPNPLAI----SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIA 292
SF+GLK+ F L I SNG RV MLVW P + KK+ETLSYLP LS EQ+
Sbjct: 25 SFNGLKSAASFPVTRKQDLDITSIASNGGRVECMLVWPPINKKKYETLSYLPDLSDEQLL 84

Query: 293 KQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVL 460
K+++++++KGW PC+EF+ + G VYREH GYYDGRYW MWKLPMFGC DA VL
Sbjct: 85 KEIEYLLQKGWVPCLEFETEHGFVYREHHRSPGYYDGRYWTMWKLPMFGCTDATQVL 141


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
Length = 177

Score = 141 bits (355), Expect = 2e-33
Identities = 68/115 (59%), Positives = 82/115 (71%), Gaps = 4/115 (3%)
Frame = +2

Query: 128 FSGLKATTLFAP--KSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 295
F+GL+++ F K+ N L+ SNG RVS M VW P KKFETLSYLPPLS E +AK
Sbjct: 26 FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 296 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVL 460
+VD+++R W PCIEF K G VYRE+ GYYDGRYW MWKLPMFGC DA+ V+
Sbjct: 86 EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVI 140


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
Length = 177

Score = 141 bits (355), Expect = 2e-33
Identities = 68/115 (59%), Positives = 82/115 (71%), Gaps = 4/115 (3%)
Frame = +2

Query: 128 FSGLKATTLFAP--KSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 295
F+GL+++ F K+ N L+ SNG RVS M VW P KKFETLSYLPPLS E +AK
Sbjct: 26 FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 296 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVL 460
+VD+++R W PCIEF K G VYRE+ GYYDGRYW MWKLPMFGC DA+ V+
Sbjct: 86 EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVI 140


>sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1
Length = 183

Score = 140 bits (354), Expect = 2e-33
Identities = 68/116 (58%), Positives = 86/116 (74%), Gaps = 4/116 (3%)
Frame = +2

Query: 128 FSGLKATTLF--APKSPNPLAI-SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 298
F+GLK+++ F KS + +I SNG RV M VW P KKFETLSYLPPLSSE +AK+
Sbjct: 30 FNGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSESLAKE 89

Query: 299 VDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLR 463
VD+++RK W PC+EF+ + G VYRE+ GYYDGRYW MWKLPMFGC D++ VL+
Sbjct: 90 VDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLK 145


>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
Length = 181

Score = 139 bits (350), Expect = 6e-33
Identities = 65/121 (53%), Positives = 84/121 (69%), Gaps = 5/121 (4%)
Frame = +2

Query: 116 LSKSFSGLKATTLF--APKSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSE 283
L+ F+GLK+ F K+ N + SNG RV M VW P KK+ETLSYLPPLS E
Sbjct: 22 LAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDE 81

Query: 284 QIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVL 460
++K++D+++R W PC+EF+ + G VYREH H GYYDGRYW MWKLPMFGC D+A V+
Sbjct: 82 ALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVM 141

Query: 461 R 463
+
Sbjct: 142 K 142


>sp|P29684|RBS_HEVBR Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Hevea brasiliensis GN=RBCS PE=2 SV=1
Length = 183

Score = 139 bits (349), Expect = 8e-33
Identities = 65/117 (55%), Positives = 82/117 (70%), Gaps = 5/117 (4%)
Frame = +2

Query: 128 FSGLKATTLFAPKSPNPLAI----SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 295
F+GLK+T+ F I SNG RV M VW P K +ETLSYLPPL+ EQ+AK
Sbjct: 28 FTGLKSTSAFPTTRKTTTDITSIASNGGRVQCMQVWPPRGKKFYETLSYLPPLTREQLAK 87

Query: 296 QVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLR 463
+V++++RKGW PC+EF+ + G+VYRE+ GYYDGRYW MWKLPMFGC DA VL+
Sbjct: 88 EVEYLLRKGWVPCLEFELEHGTVYREYHRSPGYYDGRYWTMWKLPMFGCTDAVQVLQ 144


tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 116
Score (bit) 224.0
E-value 2.0e-57
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946229|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0011_O14, 5'
(465 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c... 224 2e-57
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c... 157 2e-37
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c... 154 2e-36
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c... 153 5e-36
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c... 153 5e-36
tr|A9U380|A9U380_PHYPA Ribulose bisphosphate carboxylase small c... 153 5e-36
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c... 153 5e-36
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c... 150 2e-35
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c... 146 6e-34
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c... 145 7e-34
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c... 145 7e-34
tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c... 143 4e-33
tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c... 143 5e-33
tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c... 142 6e-33
tr|B4FSJ3|B4FSJ3_MAIZE Putative uncharacterized protein OS=Zea m... 142 8e-33
tr|A9SRS0|A9SRS0_PHYPA Ribulose bisphosphate carboxylase small c... 142 1e-32
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c... 142 1e-32
tr|A9S8M9|A9S8M9_PHYPA Ribulose bisphosphate carboxylase small c... 141 1e-32
tr|A9S8M6|A9S8M6_PHYPA Ribulose bisphosphate carboxylase small c... 141 1e-32
tr|Q6RWD8|Q6RWD8_CAPAN Ribulose bisphosphate carboxylase small c... 141 2e-32
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c... 141 2e-32
tr|A9U4X8|A9U4X8_PHYPA Ribulose bisphosphate carboxylase small c... 140 2e-32
tr|A9U4X7|A9U4X7_PHYPA Ribulose bisphosphate carboxylase small c... 140 2e-32
tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small c... 140 2e-32
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c... 140 3e-32
tr|O24574|O24574_MAIZE Ribulose bisphosphate carboxylase small c... 140 4e-32
tr|A9SCN2|A9SCN2_PHYPA Ribulose bisphosphate carboxylase small c... 140 4e-32
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c... 139 5e-32
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c... 139 5e-32
tr|B6RHQ3|B6RHQ3_9POAL Chloroplast ribulose-1,5-bisphosphate car... 139 7e-32

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
Length = 174

Score = 224 bits (570), Expect = 2e-57
Identities = 101/116 (87%), Positives = 110/116 (94%)
Frame = +2

Query: 116 LSKSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 295
LSKSFSGLKA TLFAPK NPLAISNGSR+SAMLVWKPYDNKKFETLSYLPPL+++QIAK
Sbjct: 22 LSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQIAK 81

Query: 296 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLR 463
QV++MVRKGWTPCIEFD IGSVYREHFHGSGYYDGRYW+MWKLPMFGC D+ +VLR
Sbjct: 82 QVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLR 137


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_87740 PE=3 SV=1
Length = 179

Score = 157 bits (398), Expect = 2e-37
Identities = 75/117 (64%), Positives = 87/117 (74%), Gaps = 3/117 (2%)
Frame = +2

Query: 122 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 301
K FSGLK+TTLFA K+ ++ NGSRV M VW P KFET SYLPPL+ +QIAKQV
Sbjct: 27 KQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 302 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLR 463
DFM+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D+A VLR
Sbjct: 87 DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLR 143


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_87752 PE=3 SV=1
Length = 179

Score = 154 bits (390), Expect = 2e-36
Identities = 74/117 (63%), Positives = 86/117 (73%), Gaps = 3/117 (2%)
Frame = +2

Query: 122 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 301
K FSGLK+TTL A K+ ++ NGSRV M VW P KFET SYLPPL+ +QIAKQV
Sbjct: 27 KQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 302 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLR 463
DFM+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D+A VLR
Sbjct: 87 DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLR 143


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
Length = 214

Score = 153 bits (386), Expect = 5e-36
Identities = 71/117 (60%), Positives = 87/117 (74%), Gaps = 3/117 (2%)
Frame = +2

Query: 122 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 301
K+FSGLK+ TLF+ K+ ++ NGSRV M VW P KFET SYLPPL+ +QIAKQV
Sbjct: 62 KAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 121

Query: 302 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLR 463
D+M+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D++ VLR
Sbjct: 122 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLR 178


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
PE=2 SV=1
Length = 184

Score = 153 bits (386), Expect = 5e-36
Identities = 71/117 (60%), Positives = 86/117 (73%), Gaps = 3/117 (2%)
Frame = +2

Query: 122 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 301
K+FSGLK+ TLF KS ++ NGSRV M VW P KFET SYLPPLS +QIA+QV
Sbjct: 32 KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 91

Query: 302 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLR 463
D+M+++ PCIEFD +G+V R +F G SGYYDGRYW MWKLPMFGC D++ VLR
Sbjct: 92 DYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLR 148


>tr|A9U380|A9U380_PHYPA Ribulose bisphosphate carboxylase small
chain (Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_8310 PE=3 SV=1
Length = 156

Score = 153 bits (386), Expect = 5e-36
Identities = 71/117 (60%), Positives = 86/117 (73%), Gaps = 3/117 (2%)
Frame = +2

Query: 122 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 301
K+FSGLK+ TLF KS ++ NGSRV M VW P KFET SYLPPLS +QIA+QV
Sbjct: 36 KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 95

Query: 302 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLR 463
D+M+++ PCIEFD +G+V R +F G SGYYDGRYW MWKLPMFGC D++ VLR
Sbjct: 96 DYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLR 152


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_221004 PE=3 SV=1
Length = 184

Score = 153 bits (386), Expect = 5e-36
Identities = 72/117 (61%), Positives = 86/117 (73%), Gaps = 3/117 (2%)
Frame = +2

Query: 122 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 301
K+FSGLK TLF+ K+ A+ NGSRV M VW P KFET SYLPPL+ +QIAKQV
Sbjct: 32 KAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 91

Query: 302 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLR 463
D+M+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D++ VLR
Sbjct: 92 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLR 148


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_225236 PE=3 SV=1
Length = 183

Score = 150 bits (380), Expect = 2e-35
Identities = 69/117 (58%), Positives = 87/117 (74%), Gaps = 3/117 (2%)
Frame = +2

Query: 122 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 301
K+FSGLK+ TLF+ ++ ++ NGSRV M VW P KFET SYLPPL+ ++IAKQV
Sbjct: 31 KAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQV 90

Query: 302 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLR 463
D+M+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D++ VLR
Sbjct: 91 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLR 147


>tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_115069 PE=3 SV=1
Length = 181

Score = 146 bits (368), Expect = 6e-34
Identities = 66/114 (57%), Positives = 82/114 (71%)
Frame = +2

Query: 122 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 301
K+FSGLK+ T+F+ K+ N ++ NGSRV M VW P KFET SYLPPLS + IAKQV
Sbjct: 32 KAFSGLKSATVFSGKAQNSSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 302 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLR 463
++M+++ PC+EFD V R + GYYDGRYW MWKLPMFGCQD+A VLR
Sbjct: 92 EYMIQQKLIPCLEFDNANGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDSAQVLR 145


>tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_146969 PE=3 SV=1
Length = 181

Score = 145 bits (367), Expect = 7e-34
Identities = 67/114 (58%), Positives = 82/114 (71%)
Frame = +2

Query: 122 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 301
K+FSGLK++TLF+ K+ + ++ NGSRV M VW P KFET SYLPPLS + IAKQV
Sbjct: 32 KAFSGLKSSTLFSSKAQSLSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 302 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLR 463
D+M+++ PC+EFD V R + GYYDGRYW MWKLPMFGCQD A VLR
Sbjct: 92 DYMIQQKLIPCLEFDNADGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDPAQVLR 145