DK946264
Clone id YMU02A01NGRL0012_A11
Library
Length 187
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0012_A11. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
TTGCAGACATGGGTTTTGGATAGACGGTGGCGCGGTTTCGCTGTGCTTCCTCCTCTTACC
GGCCTTTTCTATTTACATGAACTTTGCCTAAGTAACTGATAATGTAGACAACTATGTTGT
TTTGTTTTCTCCTGAATATTATGTTGAGGCTTTTCTAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAA
■■Homology search results ■■ -
sp_hit_id Q66I12
Definition sp|Q66I12|CCD47_DANRE Coiled-coil domain-containing protein 47 OS=Danio rerio
Align length 32
Score (bit) 29.3
E-value 6.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946264|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0012_A11, 5'
(156 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q66I12|CCD47_DANRE Coiled-coil domain-containing protein 47 O... 29 6.5

>sp|Q66I12|CCD47_DANRE Coiled-coil domain-containing protein 47
OS=Danio rerio GN=ccdc47 PE=2 SV=1
Length = 486

Score = 29.3 bits (64), Expect = 6.5
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = -3

Query: 118 NIVVYIISYLGKVHVNRKGR*EEEAQRNRATV 23
N+V+Y I + K+ +NR+G+ ++A RNRA V
Sbjct: 387 NMVIYSIDKVKKLRLNREGK--QKADRNRARV 416


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946264|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0012_A11, 5'
(156 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******