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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK946320
Clone id YMU02A01NGRL0012_D12
Library
Length 350
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0012_D12. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GAATCGATGATATTATGACAAGTTTGGCTGCCAGAGATGGTTATGATTGGCTAGAATACA
AGAAACAGCTGAAAAAGGGTGAACAATGGAATGTGGAGGTGTACTGAGGCTTTGAACGTT
TACTCGGGCAGGAAGTTCTCTTTGTAAAAATCCGAGGCAAAGAGCTTTGTACATGAACAC
ATGAAGCCGATTGTACCTCTGTGTACCATGATCCTTGTATAACTTATCCAAGCTCTAGTT
AACTCGAAGAGCTTGGTGCATTTCCTACATCTACATGCATGTACTCCACCATTGCAAGAA
TCTAATTTCAGATTGAGTCCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P41344
Definition sp|P41344|FENR1_ORYSJ Ferredoxin--NADP reductase, leaf isozyme, chloroplastic OS=Oryza sativa subsp. japonica
Align length 34
Score (bit) 66.6
E-value 4.0e-11
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946320|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0012_D12, 5'
         (321 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P41344|FENR1_ORYSJ Ferredoxin--NADP reductase, leaf isozyme, ...    67   4e-11
sp|Q9FKW6|FNRL1_ARATH Ferredoxin--NADP reductase, leaf isozyme 1...    66   5e-11
sp|Q8W493|FNRL2_ARATH Ferredoxin--NADP reductase, leaf isozyme 2...    64   2e-10
sp|P41343|FENR_MESCR Ferredoxin--NADP reductase, chloroplastic O...    64   2e-10
sp|P10933|FENR1_PEA Ferredoxin--NADP reductase, leaf isozyme, ch...    63   4e-10
sp|P00455|FENR_SPIOL Ferredoxin--NADP reductase, chloroplastic O...    63   5e-10
sp|P41346|FENR_VICFA Ferredoxin--NADP reductase, chloroplastic O...    59   1e-08
sp|O04977|FENR1_TOBAC Ferredoxin--NADP reductase, leaf-type isoz...    58   2e-08
sp|Q44549|FENR_ANAVT Ferredoxin--NADP reductase OS=Anabaena vari...    40   0.005
sp|P58558|FENR_ANASP Ferredoxin--NADP reductase OS=Anabaena sp. ...    40   0.005
sp|P21890|FENR_ANASO Ferredoxin--NADP reductase OS=Anabaena sp. ...    40   0.005
sp|Q93RE3|FENR_THEEB Ferredoxin--NADP reductase OS=Thermosynecho...    39   0.010
sp|Q55318|FENR_SYNY3 Ferredoxin--NADP reductase OS=Synechocystis...    39   0.010
sp|P00454|FENR_SPISP Ferredoxin--NADP reductase OS=Spirulina sp....    39   0.010
sp|O04397|FENR2_TOBAC Ferredoxin--NADP reductase, root-type isoz...    37   0.040
sp|P31973|FENR_SYNP2 Ferredoxin--NADP reductase OS=Synechococcus...    36   0.052
sp|P41345|FENR2_ORYSJ Ferredoxin--NADP reductase, root isozyme, ...    35   0.088
sp|O23877|FENR3_ORYSJ Ferredoxin--NADP reductase, embryo isozyme...    35   0.12 
sp|Q41014|FENR2_PEA Ferredoxin--NADP reductase, root isozyme, ch...    35   0.12 
sp|Q9M0V6|FNRR1_ARATH Ferredoxin--NADP reductase, root isozyme 1...    33   0.44 
sp|Q9S9P8|FNRR2_ARATH Ferredoxin--NADP reductase, root isozyme 2...    31   1.7  
sp|Q3MHQ4|SNAI2_BOVIN Zinc finger protein SNAI2 OS=Bos taurus GN...    31   2.2  
sp|Q20026|CTL1L_CAEEL Choline transporter-like protein 1 OS=Caen...    31   2.2  
sp|O14709|ZN197_HUMAN Zinc finger protein 197 OS=Homo sapiens GN...    30   3.7  
sp|P53991|FENR_CHLRE Ferredoxin--NADP reductase, chloroplastic O...    30   3.7  
sp|Q02085|SNAI1_MOUSE Zinc finger protein SNAI1 OS=Mus musculus ...    30   4.8  
sp|Q0D2J5|ZN763_HUMAN Zinc finger protein 763 OS=Homo sapiens GN...    29   6.3  
sp|Q6P280|ZN529_HUMAN Zinc finger protein 529 OS=Homo sapiens GN...    29   6.3  
sp|Q00598|FENR_CYAPA Ferredoxin--NADP reductase, cyanelle OS=Cya...    29   8.2  

>sp|P41344|FENR1_ORYSJ Ferredoxin--NADP reductase, leaf isozyme,
           chloroplastic OS=Oryza sativa subsp. japonica
           GN=Os06g0107700 PE=2 SV=1
          Length = 362

 Score = 66.6 bits (161), Expect = 4e-11
 Identities = 29/34 (85%), Positives = 31/34 (91%)
 Frame = +3

Query: 3   IDDIMTSLAARDGYDWLEYKKQLKKGEQWNVEVY 104
           IDDIM SLAA+DG DW +YKKQLKKGEQWNVEVY
Sbjct: 329 IDDIMVSLAAKDGIDWADYKKQLKKGEQWNVEVY 362


>sp|Q9FKW6|FNRL1_ARATH Ferredoxin--NADP reductase, leaf isozyme 1,
           chloroplastic OS=Arabidopsis thaliana GN=LFNR1 PE=1 SV=1
          Length = 360

 Score = 66.2 bits (160), Expect = 5e-11
 Identities = 29/34 (85%), Positives = 31/34 (91%)
 Frame = +3

Query: 3   IDDIMTSLAARDGYDWLEYKKQLKKGEQWNVEVY 104
           IDDIM SLAA+DG DWLEYKKQLK+ EQWNVEVY
Sbjct: 327 IDDIMVSLAAKDGIDWLEYKKQLKRSEQWNVEVY 360


>sp|Q8W493|FNRL2_ARATH Ferredoxin--NADP reductase, leaf isozyme 2,
           chloroplastic OS=Arabidopsis thaliana GN=LFNR2 PE=1 SV=1
          Length = 369

 Score = 63.9 bits (154), Expect = 2e-10
 Identities = 28/34 (82%), Positives = 29/34 (85%)
 Frame = +3

Query: 3   IDDIMTSLAARDGYDWLEYKKQLKKGEQWNVEVY 104
           IDDIM SLAA DG DW +YKKQLKK EQWNVEVY
Sbjct: 336 IDDIMVSLAANDGIDWFDYKKQLKKAEQWNVEVY 369


>sp|P41343|FENR_MESCR Ferredoxin--NADP reductase, chloroplastic
           OS=Mesembryanthemum crystallinum GN=PETH PE=2 SV=1
          Length = 365

 Score = 63.9 bits (154), Expect = 2e-10
 Identities = 28/34 (82%), Positives = 29/34 (85%)
 Frame = +3

Query: 3   IDDIMTSLAARDGYDWLEYKKQLKKGEQWNVEVY 104
           IDDIM SLAA DG DW +YKKQLKK EQWNVEVY
Sbjct: 332 IDDIMVSLAAEDGIDWFDYKKQLKKAEQWNVEVY 365


>sp|P10933|FENR1_PEA Ferredoxin--NADP reductase, leaf isozyme,
           chloroplastic OS=Pisum sativum GN=PETH PE=1 SV=1
          Length = 360

 Score = 63.2 bits (152), Expect = 4e-10
 Identities = 27/34 (79%), Positives = 30/34 (88%)
 Frame = +3

Query: 3   IDDIMTSLAARDGYDWLEYKKQLKKGEQWNVEVY 104
           IDDIM SLAA+DG DW+EYK+ LKK EQWNVEVY
Sbjct: 327 IDDIMVSLAAKDGIDWIEYKRTLKKAEQWNVEVY 360


>sp|P00455|FENR_SPIOL Ferredoxin--NADP reductase, chloroplastic
           OS=Spinacia oleracea GN=PETH PE=1 SV=1
          Length = 369

 Score = 62.8 bits (151), Expect = 5e-10
 Identities = 27/34 (79%), Positives = 30/34 (88%)
 Frame = +3

Query: 3   IDDIMTSLAARDGYDWLEYKKQLKKGEQWNVEVY 104
           IDDIM SLAA +G DW+EYK+QLKK EQWNVEVY
Sbjct: 336 IDDIMVSLAAAEGIDWIEYKRQLKKAEQWNVEVY 369


>sp|P41346|FENR_VICFA Ferredoxin--NADP reductase, chloroplastic
           OS=Vicia faba GN=PETH PE=2 SV=1
          Length = 363

 Score = 58.5 bits (140), Expect = 1e-08
 Identities = 24/34 (70%), Positives = 28/34 (82%)
 Frame = +3

Query: 3   IDDIMTSLAARDGYDWLEYKKQLKKGEQWNVEVY 104
           IDDIM S+  +DG DW+EYK+ LKK EQWNVEVY
Sbjct: 330 IDDIMVSIRPKDGIDWIEYKRTLKKAEQWNVEVY 363


>sp|O04977|FENR1_TOBAC Ferredoxin--NADP reductase, leaf-type
           isozyme, chloroplastic OS=Nicotiana tabacum GN=PETH PE=2
           SV=1
          Length = 362

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 25/34 (73%), Positives = 29/34 (85%)
 Frame = +3

Query: 3   IDDIMTSLAARDGYDWLEYKKQLKKGEQWNVEVY 104
           ID+IM++LA RDG  W +YKKQLKK EQWNVEVY
Sbjct: 329 IDEIMSALAERDGIVWADYKKQLKKAEQWNVEVY 362


>sp|Q44549|FENR_ANAVT Ferredoxin--NADP reductase OS=Anabaena
           variabilis (strain ATCC 29413 / PCC 7937) GN=petH PE=3
           SV=1
          Length = 440

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 15/34 (44%), Positives = 24/34 (70%)
 Frame = +3

Query: 3   IDDIMTSLAARDGYDWLEYKKQLKKGEQWNVEVY 104
           ID  +++ AA++G  W +Y+K LKK  +W+VE Y
Sbjct: 407 IDAALSAAAAKEGVTWSDYQKDLKKAGRWHVETY 440


>sp|P58558|FENR_ANASP Ferredoxin--NADP reductase OS=Anabaena sp.
           (strain PCC 7120) GN=petH PE=3 SV=1
          Length = 440

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 15/34 (44%), Positives = 24/34 (70%)
 Frame = +3

Query: 3   IDDIMTSLAARDGYDWLEYKKQLKKGEQWNVEVY 104
           ID  +++ AA++G  W +Y+K LKK  +W+VE Y
Sbjct: 407 IDAALSAAAAKEGVTWSDYQKDLKKAGRWHVETY 440
tr_hit_id Q0DF89
Definition tr|Q0DF89|Q0DF89_ORYSJ Ferredoxin--NADP reductase OS=Oryza sativa subsp. japonica
Align length 34
Score (bit) 66.6
E-value 6.0e-10
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946320|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0012_D12, 5'
         (321 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q0DF89|Q0DF89_ORYSJ Ferredoxin--NADP reductase OS=Oryza sativ...    67   6e-10
tr|A6N1B5|A6N1B5_ORYSI Ferredoxin-nadp reductase, leaf isozyme (...    67   6e-10
tr|A2Y8E0|A2Y8E0_ORYSI Ferredoxin--NADP reductase OS=Oryza sativ...    67   6e-10
tr|B4FUM2|B4FUM2_MAIZE Putative uncharacterized protein OS=Zea m...    66   8e-10
tr|B6T9S5|B6T9S5_MAIZE Ferredoxin--NADP reductase, leaf isozyme ...    66   1e-09
tr|A7QDX2|A7QDX2_VITVI Ferredoxin--NADP reductase OS=Vitis vinif...    65   1e-09
tr|A7NSU2|A7NSU2_VITVI Chromosome chr18 scaffold_1, whole genome...    65   1e-09
tr|A5BG49|A5BG49_VITVI Ferredoxin--NADP reductase OS=Vitis vinif...    65   1e-09
tr|Q6ZFJ4|Q6ZFJ4_ORYSJ Ferredoxin--NADP reductase OS=Oryza sativ...    64   3e-09
tr|Q6ZFJ3|Q6ZFJ3_ORYSJ Ferredoxin--NADP reductase OS=Oryza sativ...    64   3e-09
tr|A2WZT1|A2WZT1_ORYSI Ferredoxin--NADP reductase OS=Oryza sativ...    64   3e-09
tr|Q8RVZ8|Q8RVZ8_WHEAT Ferredoxin--NADP reductase OS=Triticum ae...    64   4e-09
tr|Q9M4D2|Q9M4D2_CAPAN Ferredoxin--NADP reductase OS=Capsicum an...    63   6e-09
tr|A4UTS5|A4UTS5_PEA Ferredoxin--NADP reductase OS=Pisum sativum...    63   6e-09
tr|Q9SLP6|Q9SLP6_MAIZE Ferredoxin--NADP reductase OS=Zea mays GN...    63   8e-09
tr|A9PJ48|A9PJ48_POPJC Putative uncharacterized protein OS=Popul...    63   8e-09
tr|Q9SLP5|Q9SLP5_MAIZE Ferredoxin--NADP reductase OS=Zea mays GN...    62   1e-08
tr|B6TEW2|B6TEW2_MAIZE Ferredoxin--NADP reductase, leaf isozyme ...    62   1e-08
tr|B4FN63|B4FN63_MAIZE Putative uncharacterized protein OS=Zea m...    62   1e-08
tr|A5AWT8|A5AWT8_VITVI Putative uncharacterized protein OS=Vitis...    62   2e-08
tr|Q43084|Q43084_PEA Ferredoxin NADP+ reductase (Fragment) OS=Pi...    61   2e-08
tr|A9NNX5|A9NNX5_PICSI Ferredoxin--NADP reductase OS=Picea sitch...    59   9e-08
tr|A9NM10|A9NM10_PICSI Ferredoxin--NADP reductase OS=Picea sitch...    59   9e-08
tr|Q56ZZ9|Q56ZZ9_ARATH Ferredoxin-NADP+ reductase OS=Arabidopsis...    59   2e-07
tr|Q8RVZ9|Q8RVZ9_WHEAT Ferredoxin--NADP reductase OS=Triticum ae...    58   3e-07
tr|A0ZSY5|A0ZSY5_CYACA Ferredoxin--NADP reductase OS=Cyanidium c...    48   2e-04
tr|A5GS04|A5GS04_SYNR3 Ferredoxin--NADP reductase OS=Synechococc...    45   0.001
tr|B5BNZ0|B5BNZ0_NOSCO Ferredoxin-NADP+ oxidoreductase OS=Nostoc...    45   0.001
tr|A3Z7V8|A3Z7V8_9SYNE Ferredoxin--NADP reductase OS=Synechococc...    45   0.002
tr|A0ZEU2|A0ZEU2_NODSP Ferredoxin--NADP reductase OS=Nodularia s...    45   0.002

>tr|Q0DF89|Q0DF89_ORYSJ Ferredoxin--NADP reductase OS=Oryza sativa
           subsp. japonica GN=Os06g0107700 PE=2 SV=1
          Length = 362

 Score = 66.6 bits (161), Expect = 6e-10
 Identities = 29/34 (85%), Positives = 31/34 (91%)
 Frame = +3

Query: 3   IDDIMTSLAARDGYDWLEYKKQLKKGEQWNVEVY 104
           IDDIM SLAA+DG DW +YKKQLKKGEQWNVEVY
Sbjct: 329 IDDIMVSLAAKDGIDWADYKKQLKKGEQWNVEVY 362


>tr|A6N1B5|A6N1B5_ORYSI Ferredoxin-nadp reductase, leaf isozyme
           (Fragment) OS=Oryza sativa subsp. indica PE=2 SV=1
          Length = 188

 Score = 66.6 bits (161), Expect = 6e-10
 Identities = 29/34 (85%), Positives = 31/34 (91%)
 Frame = +3

Query: 3   IDDIMTSLAARDGYDWLEYKKQLKKGEQWNVEVY 104
           IDDIM SLAA+DG DW +YKKQLKKGEQWNVEVY
Sbjct: 155 IDDIMVSLAAKDGIDWADYKKQLKKGEQWNVEVY 188


>tr|A2Y8E0|A2Y8E0_ORYSI Ferredoxin--NADP reductase OS=Oryza sativa
           subsp. indica GN=OsI_21320 PE=3 SV=1
          Length = 362

 Score = 66.6 bits (161), Expect = 6e-10
 Identities = 29/34 (85%), Positives = 31/34 (91%)
 Frame = +3

Query: 3   IDDIMTSLAARDGYDWLEYKKQLKKGEQWNVEVY 104
           IDDIM SLAA+DG DW +YKKQLKKGEQWNVEVY
Sbjct: 329 IDDIMVSLAAKDGIDWADYKKQLKKGEQWNVEVY 362


>tr|B4FUM2|B4FUM2_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 369

 Score = 66.2 bits (160), Expect = 8e-10
 Identities = 28/34 (82%), Positives = 32/34 (94%)
 Frame = +3

Query: 3   IDDIMTSLAARDGYDWLEYKKQLKKGEQWNVEVY 104
           IDDIM +LAA+DG DW++YKKQLKKGEQWNVEVY
Sbjct: 336 IDDIMLNLAAKDGIDWMQYKKQLKKGEQWNVEVY 369


>tr|B6T9S5|B6T9S5_MAIZE Ferredoxin--NADP reductase, leaf isozyme
           OS=Zea mays PE=2 SV=1
          Length = 369

 Score = 65.9 bits (159), Expect = 1e-09
 Identities = 28/34 (82%), Positives = 31/34 (91%)
 Frame = +3

Query: 3   IDDIMTSLAARDGYDWLEYKKQLKKGEQWNVEVY 104
           IDDIM  LAA+DG DW++YKKQLKKGEQWNVEVY
Sbjct: 336 IDDIMLDLAAKDGIDWMQYKKQLKKGEQWNVEVY 369


>tr|A7QDX2|A7QDX2_VITVI Ferredoxin--NADP reductase OS=Vitis vinifera
           GN=GSVIVT00036774001 PE=3 SV=1
          Length = 362

 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 28/34 (82%), Positives = 31/34 (91%)
 Frame = +3

Query: 3   IDDIMTSLAARDGYDWLEYKKQLKKGEQWNVEVY 104
           IDDIM SLAARDG DW+EYK+QLK+ EQWNVEVY
Sbjct: 329 IDDIMVSLAARDGIDWIEYKRQLKRAEQWNVEVY 362


>tr|A7NSU2|A7NSU2_VITVI Chromosome chr18 scaffold_1, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00014406001
           PE=4 SV=1
          Length = 255

 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 29/34 (85%), Positives = 30/34 (88%)
 Frame = +3

Query: 3   IDDIMTSLAARDGYDWLEYKKQLKKGEQWNVEVY 104
           IDDIM SLAARDG DW EYK+QLKK EQWNVEVY
Sbjct: 222 IDDIMVSLAARDGIDWTEYKRQLKKSEQWNVEVY 255


>tr|A5BG49|A5BG49_VITVI Ferredoxin--NADP reductase OS=Vitis vinifera
           GN=VITISV_042164 PE=3 SV=1
          Length = 362

 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 28/34 (82%), Positives = 31/34 (91%)
 Frame = +3

Query: 3   IDDIMTSLAARDGYDWLEYKKQLKKGEQWNVEVY 104
           IDDIM SLAARDG DW+EYK+QLK+ EQWNVEVY
Sbjct: 329 IDDIMVSLAARDGIDWIEYKRQLKRAEQWNVEVY 362


>tr|Q6ZFJ4|Q6ZFJ4_ORYSJ Ferredoxin--NADP reductase OS=Oryza sativa
           subsp. japonica GN=OJ1435_F07.32-1 PE=3 SV=1
          Length = 350

 Score = 64.3 bits (155), Expect = 3e-09
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = +3

Query: 3   IDDIMTSLAARDGYDWLEYKKQLKKGEQWNVEVY 104
           IDDIM  LAA+DG DWL+YKKQLKK EQWNVEVY
Sbjct: 317 IDDIMIDLAAKDGIDWLDYKKQLKKSEQWNVEVY 350


>tr|Q6ZFJ3|Q6ZFJ3_ORYSJ Ferredoxin--NADP reductase OS=Oryza sativa
           subsp. japonica GN=OJ1435_F07.32-2 PE=2 SV=1
          Length = 366

 Score = 64.3 bits (155), Expect = 3e-09
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = +3

Query: 3   IDDIMTSLAARDGYDWLEYKKQLKKGEQWNVEVY 104
           IDDIM  LAA+DG DWL+YKKQLKK EQWNVEVY
Sbjct: 333 IDDIMIDLAAKDGIDWLDYKKQLKKSEQWNVEVY 366