DK946327 |
Clone id |
YMU02A01NGRL0012_D22 |
Library |
YMU02 |
Length |
560 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0012_D22. 5' end sequence. |
Accession |
DK946327 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL2Contig4 |
Sequence |
GTTCTCGCAACTCTCTGTCTTGTGCACTCGCTGATCATCTCTAGACCGGCAGTAGCAATG GCGAGCTCTGTGGCTTCTTTGGCAGTTGCTGCTCCCTCGTGCGCCCCGGCAGAGAGCCTA TCTAAGAGCTTCTCCGGCCTCAGGCCCACTACCCTCGCTGCCCCCAAGAGCGCCAACCCG CTCTCCATCTCCAACGGCAGCCGCGTGAGCGCCATGCTTGTGTGGAAGCCGTATGACAAC AAGAAGTTCGAGACTCTGTCCTACTTGCCGCCTTTGACAAGCGAGCAGATTGCGAAGCAG GTGGACTTCATGGTCCGGAAGGGCTGGACCCCCTGCATTGAGTTCGACAAAATCGGAAGC GTATACCGAGAGCACTTCCATGGCAGCGGCTACTACGATGGGCGATACTGGGTGATGTGG AAGTTGCCCATGTTTGGCTGCCAAGATGCCGCCGCTGTGCTGCGTGAAATTGCAGAGTGC GCCAAGGAGTACCCCGAAGCCTTCATCCGCGTGCTGGGCTTTGACGCCNAGAGGCAGGTG CAGGTCTCCGGCTTCCTTGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q40250 |
Definition |
sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa |
Align length |
153 |
Score (bit) |
177.0 |
E-value |
2.0e-44 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK946327|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0012_D22, 5' (560 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai... 177 2e-44 sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai... 177 4e-44 sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai... 176 9e-44 sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai... 175 1e-43 sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai... 175 1e-43 sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha... 175 2e-43 sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha... 175 2e-43 sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch... 175 2e-43 sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha... 174 3e-43 sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha... 173 5e-43 sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai... 173 6e-43 sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai... 172 8e-43 sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai... 172 1e-42 sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha... 172 1e-42 sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha... 172 1e-42 sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch... 172 1e-42 sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai... 172 1e-42 sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha... 172 1e-42 sp|Q39746|RBS4_FLAPR Ribulose bisphosphate carboxylase small cha... 172 1e-42 sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai... 171 2e-42 sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai... 171 2e-42 sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai... 171 2e-42 sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch... 171 2e-42 sp|Q39744|RBS2_FLAPR Ribulose bisphosphate carboxylase small cha... 171 3e-42 sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch... 171 3e-42 sp|Q0INY7|RBS1_ORYSJ Ribulose bisphosphate carboxylase small cha... 171 3e-42 sp|A2Y205|RBS1_ORYSI Ribulose bisphosphate carboxylase small cha... 171 3e-42 sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha... 171 3e-42 sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai... 170 5e-42 sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai... 170 5e-42
>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1 Length = 181
Score = 177 bits (450), Expect = 2e-44 Identities = 84/153 (54%), Positives = 106/153 (69%), Gaps = 6/153 (3%) Frame = +1
Query: 118 LSKSFSGLR-----PTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTS 282 L+ F+GL+ P T A + L SNG RV M VW P KK+ETLSYLPPL+ Sbjct: 22 LAAPFTGLKSNVAFPVTKKANNDFSSLP-SNGGRVQCMKVWPPIGLKKYETLSYLPPLSD 80
Query: 283 EQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAV 459 E ++K++D+++R W PC+EF+ + G VYREH H GYYDGRYW MWKLPMFGC D+A V Sbjct: 81 EALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQV 140
Query: 460 LREIAECAKEYPEAFIRVLGFDAXRQVQVSGFL 558 ++E+ EC KEYP AFIRV+GFD RQVQ F+ Sbjct: 141 MKEVGECKKEYPNAFIRVIGFDNIRQVQCISFI 173
>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2 SV=1 Length = 178
Score = 177 bits (448), Expect = 4e-44 Identities = 77/123 (62%), Positives = 94/123 (76%) Frame = +1
Query: 190 SNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 369 SNG RV M VW P KKFETLSYLPPLT EQ+ ++VD+++R GW PCIEF K+G VYR Sbjct: 49 SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVDYLIRNGWIPCIEFCKVGFVYR 108
Query: 370 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAXRQVQVS 549 E+ + GYYDGRYW MWKLPMFGC D++ VL+E+ EC+K YP+ F R++GFD RQVQ Sbjct: 109 EYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSKAYPDYFNRIIGFDNTRQVQCI 168
Query: 550 GFL 558 FL Sbjct: 169 SFL 171
>sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Helianthus annuus GN=RBCS PE=2 SV=1 Length = 178
Score = 176 bits (445), Expect = 9e-44 Identities = 87/151 (57%), Positives = 108/151 (71%), Gaps = 8/151 (5%) Frame = +1
Query: 130 FSGLR-----PTTLAAPKSANPLSI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQ 288 F+GL+ PTT K AN S SNG RV M VW P KK+ETLSYLPPLT Q Sbjct: 25 FTGLKSNAAFPTT----KKANDFSTLPSNGGRVQCMKVWPPLGLKKYETLSYLPPLTETQ 80
Query: 289 IAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLR 465 +AK+VD+++RK W PC+EF+ + G VYRE+ GYYDGRYW MWKLPMFGC D+A V++ Sbjct: 81 LAKEVDYLLRKKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMK 140
Query: 466 EIAECAKEYPEAFIRVLGFDAXRQVQVSGFL 558 E+AEC KEYP+A+IR++GFD RQVQ F+ Sbjct: 141 ELAECKKEYPQAWIRIIGFDNVRQVQCIMFI 171
>sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Trifolium repens GN=RBCS PE=3 SV=1 Length = 178
Score = 175 bits (444), Expect = 1e-43 Identities = 83/151 (54%), Positives = 109/151 (72%), Gaps = 4/151 (2%) Frame = +1
Query: 118 LSKSFSGLRPTT-LAAPKSANPLS--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQ 288 L+ F+GL+ + K N ++ SNGSRV+ M VW P KKFETLSYLPPLT EQ Sbjct: 21 LATPFTGLKSSAGFPVTKKNNDITSITSNGSRVNCMQVWPPVGKKKFETLSYLPPLTDEQ 80
Query: 289 IAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLR 465 + K+V++++RKGW PC+EF+ + G V+R++ GYYDGRYW MW+LP+FG DAA VL+ Sbjct: 81 LLKEVEYLLRKGWVPCVEFELEKGFVHRQYNSSPGYYDGRYWTMWRLPLFGTTDAAQVLK 140
Query: 466 EIAECAKEYPEAFIRVLGFDAXRQVQVSGFL 558 E+AEC EYPEAFIR++GFD RQVQ F+ Sbjct: 141 EVAECKAEYPEAFIRIIGFDNVRQVQCISFI 171
>sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Hordeum vulgare PE=2 SV=1 Length = 174
Score = 175 bits (444), Expect = 1e-43 Identities = 78/146 (53%), Positives = 102/146 (69%), Gaps = 3/146 (2%) Frame = +1
Query: 130 FSGLRPTT---LAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQ 300 F GL+ T ++ +A+ S+SNG R+ M VW KKFETLSYLPPL++E + KQ Sbjct: 16 FQGLKSTAGLPVSRRSNASSASVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQ 75
Query: 301 VDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAEC 480 VD+++R W PC+EF K+G ++REH GYYDGRYW MWKLPMFGC DA VL E+ E Sbjct: 76 VDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEV 135
Query: 481 AKEYPEAFIRVLGFDAXRQVQVSGFL 558 KEYP+A++R++GFD RQVQ F+ Sbjct: 136 KKEYPDAYVRIIGFDNMRQVQCVSFI 161
>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1 Length = 177
Score = 175 bits (443), Expect = 2e-43 Identities = 85/147 (57%), Positives = 102/147 (69%), Gaps = 4/147 (2%) Frame = +1
Query: 130 FSGLRPTTL--AAPKSANPLSI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAK 297 F+GLR + A K+ N LS SNG RVS M VW P KKFETLSYLPPL+ E +AK Sbjct: 26 FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85
Query: 298 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 477 +VD+++R W PCIEF K G VYRE+ GYYDGRYW MWKLPMFGC DA+ V+ E+ E Sbjct: 86 EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEE 145
Query: 478 CAKEYPEAFIRVLGFDAXRQVQVSGFL 558 K YPE F+R++GFD RQVQ F+ Sbjct: 146 AKKAYPEYFVRIIGFDNKRQVQCISFI 172
>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1 Length = 177
Score = 175 bits (443), Expect = 2e-43 Identities = 85/147 (57%), Positives = 102/147 (69%), Gaps = 4/147 (2%) Frame = +1
Query: 130 FSGLRPTTL--AAPKSANPLSI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAK 297 F+GLR + A K+ N LS SNG RVS M VW P KKFETLSYLPPL+ E +AK Sbjct: 26 FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85
Query: 298 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 477 +VD+++R W PCIEF K G VYRE+ GYYDGRYW MWKLPMFGC DA+ V+ E+ E Sbjct: 86 EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEE 145
Query: 478 CAKEYPEAFIRVLGFDAXRQVQVSGFL 558 K YPE F+R++GFD RQVQ F+ Sbjct: 146 AKKAYPEYFVRIIGFDNKRQVQCISFI 172
>sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small chain 1A, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1A PE=1 SV=2 Length = 180
Score = 175 bits (443), Expect = 2e-43 Identities = 82/148 (55%), Positives = 106/148 (71%), Gaps = 5/148 (3%) Frame = +1
Query: 130 FSGLRPTTL--AAPKSANPLS--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAK 297 F+GL+ + A K+ N ++ SNG RV+ M VW P KKFETLSYLP LT ++AK Sbjct: 24 FNGLKSSAAFPATRKANNDITSITSNGGRVNCMQVWPPIGKKKFETLSYLPDLTDSELAK 83
Query: 298 QVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIA 474 +VD+++R W PC+EF+ + G VYREH + GYYDGRYW MWKLP+FGC D+A VL+E+ Sbjct: 84 EVDYLIRNKWIPCVEFELEHGFVYREHGNSPGYYDGRYWTMWKLPLFGCTDSAQVLKEVE 143
Query: 475 ECAKEYPEAFIRVLGFDAXRQVQVSGFL 558 EC KEYP AFIR++GFD RQVQ F+ Sbjct: 144 ECKKEYPNAFIRIIGFDNTRQVQCISFI 171
>sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small chain SSU26, chloroplastic OS=Lemna gibba GN=SSU26 PE=3 SV=1 Length = 177
Score = 174 bits (440), Expect = 3e-43 Identities = 84/148 (56%), Positives = 102/148 (68%), Gaps = 5/148 (3%) Frame = +1
Query: 130 FSGLR-----PTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIA 294 F+GLR P T A K+ + L SNG +VS M VW P KKFETLSYLPPL+ E +A Sbjct: 26 FNGLRSSVAFPATRKANKNLSTLP-SNGGKVSCMQVWPPEGLKKFETLSYLPPLSVEDLA 84
Query: 295 KQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIA 474 K+VD+++R W PCIEF K G VYRE+ GYYDGRYW MWKLPMFGC DA+ V+ E+ Sbjct: 85 KEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVE 144
Query: 475 ECAKEYPEAFIRVLGFDAXRQVQVSGFL 558 E K YPE F+R++GFD RQVQ F+ Sbjct: 145 EAKKAYPEYFVRIIGFDNKRQVQCISFI 172
>sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small chain PWS4.3, chloroplastic OS=Triticum aestivum PE=3 SV=2 Length = 174
Score = 173 bits (439), Expect = 5e-43 Identities = 81/146 (55%), Positives = 102/146 (69%), Gaps = 3/146 (2%) Frame = +1
Query: 130 FSGLRPTT--LAAPKSANPL-SISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQ 300 F GL+ T + +S L S+SNG R+ M VW KKFETLSYLPPL++E ++KQ Sbjct: 16 FQGLKSTAGLPVSRRSRGSLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALSKQ 75
Query: 301 VDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAEC 480 VD+++R W PC+EF K+G V+REH GYYDGRYW MWKLPMFGC DA VL E+ E Sbjct: 76 VDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEV 135
Query: 481 AKEYPEAFIRVLGFDAXRQVQVSGFL 558 KEYP+A++RV+GFD RQVQ F+ Sbjct: 136 KKEYPDAYVRVIGFDNLRQVQCVSFI 161
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q43110 |
Definition |
tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata |
Align length |
147 |
Score (bit) |
275.0 |
E-value |
2.0e-72 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK946327|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0012_D22, 5' (560 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c... 275 2e-72 tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c... 196 9e-49 tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c... 194 2e-48 tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c... 191 2e-47 tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c... 190 5e-47 tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c... 187 3e-46 tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c... 187 3e-46 tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c... 181 2e-44 tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c... 181 3e-44 tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c... 181 3e-44 tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c... 179 7e-44 tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c... 179 9e-44 tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c... 178 2e-43 tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small c... 178 2e-43 tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c... 177 3e-43 tr|Q9ZWG6|Q9ZWG6_HORVU Ribulose bisphosphate carboxylase small c... 177 5e-43 tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c... 177 5e-43 tr|A9SRS0|A9SRS0_PHYPA Ribulose bisphosphate carboxylase small c... 177 5e-43 tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c... 176 6e-43 tr|Q9SAW5|Q9SAW5_WHEAT Ribulose bisphosphate carboxylase small c... 176 1e-42 tr|Q9S7N3|Q9S7N3_AEGLO Ribulose bisphosphate carboxylase small c... 176 1e-42 tr|A9U4X8|A9U4X8_PHYPA Ribulose bisphosphate carboxylase small c... 176 1e-42 tr|A9U4X7|A9U4X7_PHYPA Ribulose bisphosphate carboxylase small c... 176 1e-42 tr|Q9SAX5|Q9SAX5_AEGSP Ribulose bisphosphate carboxylase small c... 175 1e-42 tr|Q9ZSS0|Q9ZSS0_9POAL Ribulose bisphosphate carboxylase small c... 175 2e-42 tr|Q9SDY9|Q9SDY9_9POAL Ribulose bisphosphate carboxylase small c... 175 2e-42 tr|Q9SBU5|Q9SBU5_9POAL Ribulose bisphosphate carboxylase small c... 175 2e-42 tr|Q9SAX2|Q9SAX2_9POAL Ribulose bisphosphate carboxylase small c... 175 2e-42 tr|Q0WVH4|Q0WVH4_ARATH Ribulose bisphosphate carboxylase small c... 175 2e-42 tr|A9SCN2|A9SCN2_PHYPA Ribulose bisphosphate carboxylase small c... 175 2e-42
>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1 Length = 174
Score = 275 bits (702), Expect = 2e-72 Identities = 127/147 (86%), Positives = 138/147 (93%) Frame = +1
Query: 118 LSKSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAK 297 LSKSFSGL+ TL APK ANPL+ISNGSR+SAMLVWKPYDNKKFETLSYLPPLT++QIAK Sbjct: 22 LSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQIAK 81
Query: 298 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 477 QV++MVRKGWTPCIEFD IGSVYREHFHGSGYYDGRYW+MWKLPMFGC D+ +VLREIAE Sbjct: 82 QVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLREIAE 141
Query: 478 CAKEYPEAFIRVLGFDAXRQVQVSGFL 558 CAKEYP AFIRVLGFDA RQVQV+GFL Sbjct: 142 CAKEYPTAFIRVLGFDAKRQVQVAGFL 168
>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small chain OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_87752 PE=3 SV=1 Length = 179
Score = 196 bits (497), Expect = 9e-49 Identities = 92/148 (62%), Positives = 110/148 (74%), Gaps = 3/148 (2%) Frame = +1
Query: 124 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 303 K FSGL+ TTL+A K+ S+ NGSRV M VW P KFET SYLPPLT +QIAKQV Sbjct: 27 KQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86
Query: 304 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 474 DFM+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D+A VLREI Sbjct: 87 DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146
Query: 475 ECAKEYPEAFIRVLGFDAXRQVQVSGFL 558 EC + +P ++RVLGFD+ +QVQ+ GFL Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQVQICGFL 174
>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small chain OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_87740 PE=3 SV=1 Length = 179
Score = 194 bits (494), Expect = 2e-48 Identities = 92/148 (62%), Positives = 109/148 (73%), Gaps = 3/148 (2%) Frame = +1
Query: 124 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 303 K FSGL+ TTL A K+ S+ NGSRV M VW P KFET SYLPPLT +QIAKQV Sbjct: 27 KQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86
Query: 304 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 474 DFM+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D+A VLREI Sbjct: 87 DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146
Query: 475 ECAKEYPEAFIRVLGFDAXRQVQVSGFL 558 EC + +P ++RVLGFD+ +QVQ+ GFL Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQVQICGFL 174
>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small chain OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_221004 PE=3 SV=1 Length = 184
Score = 191 bits (486), Expect = 2e-47 Identities = 88/148 (59%), Positives = 110/148 (74%), Gaps = 3/148 (2%) Frame = +1
Query: 124 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 303 K+FSGL+P TL + K+ ++ NGSRV M VW P KFET SYLPPLT +QIAKQV Sbjct: 32 KAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 91
Query: 304 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 474 D+M+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D++ VLREI Sbjct: 92 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151
Query: 475 ECAKEYPEAFIRVLGFDAXRQVQVSGFL 558 EC ++P ++RVLGFD+ +QVQ+ GFL Sbjct: 152 ECKSQFPSCWVRVLGFDSKKQVQICGFL 179
>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small chain (Fragment) OS=Physcomitrella patens PE=2 SV=1 Length = 214
Score = 190 bits (482), Expect = 5e-47 Identities = 88/148 (59%), Positives = 109/148 (73%), Gaps = 3/148 (2%) Frame = +1
Query: 124 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 303 K+FSGL+ TL + K+ S+ NGSRV M VW P KFET SYLPPLT +QIAKQV Sbjct: 62 KAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 121
Query: 304 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 474 D+M+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D++ VLREI Sbjct: 122 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 181
Query: 475 ECAKEYPEAFIRVLGFDAXRQVQVSGFL 558 EC ++P ++RVLGFD+ +QVQ+ GFL Sbjct: 182 ECKSQFPSCWVRVLGFDSKKQVQICGFL 209
>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small chain OS=Physcomitrella patens subsp. patens GN=PprbcS1 PE=2 SV=1 Length = 184
Score = 187 bits (476), Expect = 3e-46 Identities = 87/148 (58%), Positives = 107/148 (72%), Gaps = 3/148 (2%) Frame = +1
Query: 124 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 303 K+FSGL+ TL KS S+ NGSRV M VW P KFET SYLPPL+ +QIA+QV Sbjct: 32 KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 91
Query: 304 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 474 D+M+++ PCIEFD +G+V R +F G SGYYDGRYW MWKLPMFGC D++ VLREI Sbjct: 92 DYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151
Query: 475 ECAKEYPEAFIRVLGFDAXRQVQVSGFL 558 EC YP ++RVLGFD+ +QVQ+ GFL Sbjct: 152 ECKTSYPSCWVRVLGFDSKKQVQICGFL 179
>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small chain OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_225236 PE=3 SV=1 Length = 183
Score = 187 bits (475), Expect = 3e-46 Identities = 86/148 (58%), Positives = 109/148 (73%), Gaps = 3/148 (2%) Frame = +1
Query: 124 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 303 K+FSGL+ TL + ++ S+ NGSRV M VW P KFET SYLPPLT ++IAKQV Sbjct: 31 KAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQV 90
Query: 304 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 474 D+M+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D++ VLREI Sbjct: 91 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 150
Query: 475 ECAKEYPEAFIRVLGFDAXRQVQVSGFL 558 EC ++P ++RVLGFD+ +QVQ+ GFL Sbjct: 151 ECKTQFPSCWVRVLGFDSKKQVQICGFL 178
>tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small chain OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_115069 PE=3 SV=1 Length = 181
Score = 181 bits (459), Expect = 2e-44 Identities = 83/145 (57%), Positives = 103/145 (71%) Frame = +1
Query: 124 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 303 K+FSGL+ T+ + K+ N S+ NGSRV M VW P KFET SYLPPL+ + IAKQV Sbjct: 32 KAFSGLKSATVFSGKAQNSSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91
Query: 304 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 483 ++M+++ PC+EFD V R + GYYDGRYW MWKLPMFGCQD+A VLREI EC Sbjct: 92 EYMIQQKLIPCLEFDNANGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECK 151
Query: 484 KEYPEAFIRVLGFDAXRQVQVSGFL 558 K +P F+RVLGFD +QVQ+ GFL Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICGFL 176
>tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small chain OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_146969 PE=3 SV=1 Length = 181
Score = 181 bits (458), Expect = 3e-44 Identities = 84/145 (57%), Positives = 103/145 (71%) Frame = +1
Query: 124 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 303 K+FSGL+ +TL + K+ + S+ NGSRV M VW P KFET SYLPPL+ + IAKQV Sbjct: 32 KAFSGLKSSTLFSSKAQSLSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91
Query: 304 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 483 D+M+++ PC+EFD V R + GYYDGRYW MWKLPMFGCQD A VLREI EC Sbjct: 92 DYMIQQKLIPCLEFDNADGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDPAQVLREIEECK 151
Query: 484 KEYPEAFIRVLGFDAXRQVQVSGFL 558 K +P F+RVLGFD +QVQ+ GFL Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICGFL 176
>tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small chain OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_123666 PE=3 SV=1 Length = 181
Score = 181 bits (458), Expect = 3e-44 Identities = 84/145 (57%), Positives = 104/145 (71%) Frame = +1
Query: 124 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 303 K+FSGL+ TL + +S S+ NGSRV+ M VW P KFET SYLPPL+ + IAKQV Sbjct: 32 KAFSGLKSATLFSSQSQQLSSVQNGSRVNCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91
Query: 304 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 483 ++M+++ PC+EFD V RE+ GYYDGRYW MWKLPMFGCQD+A VLREI EC Sbjct: 92 EYMIQQKLIPCLEFDNSKGVTRENNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECK 151
Query: 484 KEYPEAFIRVLGFDAXRQVQVSGFL 558 K +P F+RVLGFD +QVQ+ GFL Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICGFL 176
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