DK946341 |
Clone id |
YMU02A01NGRL0012_E18 |
Library |
YMU02 |
Length |
540 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0012_E18. 5' end sequence. |
Accession |
DK946341 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL366Contig1 |
Sequence |
GCTGTCAGTTGTGTATTCTGCAGTACGAGCAGGATCTTCGACAGCTCTTCTGTCAGCTCC AGCTTCTCCTCGAGCAGGTACTCAAAAACCTTTGCTGCCAATGCAAGAAGGAGATGGAGA GGAGGAAAATGATGAGAAGGACGAGCACAAGCCGGTGACATACGTGTATTCATTTTTTCA TCTCATTTTTGCACTTGCCAGCATGTACTCTGCAATGCTTTTGACTGGCTGGACAAATGC AAGGAGTGATGGGTCAGAGCTGATTGATGTCGGTTGGCCGTCGGTCTGGGTGCGTATGAT CACACAATGGGTCACTGCTGGTCTTTTCATATGGTCCCTCATAGCGCCTTTGATACTTCC TGAACGTGAGTTCTACTAAATAAAGAGCGTGTGCATACGTCTGGACGTTAGATGCTTTCA AGACTCAGCTATATGAAGCTGGTTTGTACATAAAATCTGGCTTTTGACTCANATATTGTT GTAAAGTGCAACTTAAGCTTTTTACAGTCTTTTGTCACCAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A9UY97 |
Definition |
sp|A9UY97|SERIC_MONBE Probable serine incorporator OS=Monosiga brevicollis |
Align length |
73 |
Score (bit) |
75.9 |
E-value |
1.0e-13 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LKQ2 |
Definition |
tr|B8LKQ2|B8LKQ2_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
124 |
Score (bit) |
140.0 |
E-value |
4.0e-32 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK946341|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0012_E18, 5' (519 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LKQ2|B8LKQ2_PICSI Putative uncharacterized protein OS=Picea... 140 4e-32 tr|Q6K688|Q6K688_ORYSJ Os02g0792900 protein OS=Oryza sativa subs... 136 5e-31 tr|B8LQ32|B8LQ32_PICSI Putative uncharacterized protein OS=Picea... 136 5e-31 tr|A6MZY1|A6MZY1_ORYSI Serine incorporator 3 (Fragment) OS=Oryza... 136 5e-31 tr|A3AC70|A3AC70_ORYSJ Putative uncharacterized protein OS=Oryza... 136 5e-31 tr|A2XAH1|A2XAH1_ORYSI Putative uncharacterized protein OS=Oryza... 136 5e-31 tr|A9PI15|A9PI15_POPTR Putative uncharacterized protein OS=Popul... 135 1e-30 tr|B8A2U3|B8A2U3_MAIZE Putative uncharacterized protein OS=Zea m... 134 3e-30 tr|B4F9D1|B4F9D1_MAIZE Putative uncharacterized protein OS=Zea m... 134 3e-30 tr|B4FAN1|B4FAN1_MAIZE Putative uncharacterized protein OS=Zea m... 131 2e-29 tr|Q9S9L9|Q9S9L9_ARATH T24D18.26 protein OS=Arabidopsis thaliana... 131 2e-29 tr|A7PVH6|A7PVH6_VITVI Chromosome chr9 scaffold_33, whole genome... 131 2e-29 tr|Q84SS3|Q84SS3_ORYSJ Os03g0454100 protein OS=Oryza sativa subs... 130 4e-29 tr|B8AKR9|B8AKR9_ORYSI Putative uncharacterized protein OS=Oryza... 130 4e-29 tr|A3AJI6|A3AJI6_ORYSJ Putative uncharacterized protein OS=Oryza... 130 4e-29 tr|B7FII2|B7FII2_MEDTR Putative uncharacterized protein OS=Medic... 125 1e-27 tr|A7NWF0|A7NWF0_VITVI Chromosome chr5 scaffold_2, whole genome ... 125 1e-27 tr|Q9M8K1|Q9M8K1_ARATH F28L1.11 protein OS=Arabidopsis thaliana ... 122 1e-26 tr|Q494Q0|Q494Q0_ARATH At3g06170 OS=Arabidopsis thaliana PE=2 SV=1 122 1e-26 tr|A9SH14|A9SH14_PHYPA Predicted protein OS=Physcomitrella paten... 120 4e-26 tr|A5ADW4|A5ADW4_VITVI Putative uncharacterized protein OS=Vitis... 120 4e-26 tr|Q01E53|Q01E53_OSTTA OJ1249_F12.26 gene product (ISS) (Fragmen... 100 3e-20 tr|A4RSD8|A4RSD8_OSTLU Predicted protein OS=Ostreococcus lucimar... 99 2e-19 tr|B6TEQ9|B6TEQ9_MAIZE Putative uncharacterized protein OS=Zea m... 96 1e-18 tr|Q10IH0|Q10IH0_ORYSJ TMS membrane family protein, putative, ex... 91 3e-17 tr|A5AR67|A5AR67_VITVI Putative uncharacterized protein OS=Vitis... 91 3e-17 tr|A9RIJ4|A9RIJ4_PHYPA Predicted protein OS=Physcomitrella paten... 87 6e-16 tr|Q93YS8|Q93YS8_ARATH Putative uncharacterized protein At4g1334... 85 2e-15 tr|Q3EA43|Q3EA43_ARATH Uncharacterized protein At4g13345.2 OS=Ar... 85 2e-15 tr|A8WXZ2|A8WXZ2_CAEBR Putative uncharacterized protein OS=Caeno... 82 2e-14
>tr|B8LKQ2|B8LKQ2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 407
Score = 140 bits (353), Expect = 4e-32 Identities = 65/124 (52%), Positives = 83/124 (66%) Frame = +2
Query: 2 LSVVYSAVRXXXXXXXXXXXXXXXXXTQKPLLPMQXXXXXXXXXXXXXHKPVTYVYSFFH 181 LSV+YSAVR ++KPLL + +PVTY Y+FFH Sbjct: 284 LSVIYSAVRAGSSTTFLSPPTSPRTGSEKPLLESKDVEEGQKDEKKDEGRPVTYSYTFFH 343
Query: 182 LIFALASMYSAMLLTGWTNARSDGSELIDVGWPSVWVRMITQWVTAGLFIWSLIAPLILP 361 LIFALASMYSAMLLTGWT++ D EL+DVGWPSVWVR+ T+W+TAGL++W+L+AP+ P Sbjct: 344 LIFALASMYSAMLLTGWTSSTKDSEELVDVGWPSVWVRICTEWITAGLYVWTLLAPIFFP 403
Query: 362 EREF 373 +REF Sbjct: 404 DREF 407
>tr|Q6K688|Q6K688_ORYSJ Os02g0792900 protein OS=Oryza sativa subsp. japonica GN=P0700F06.14 PE=2 SV=1 Length = 414
Score = 136 bits (343), Expect = 5e-31 Identities = 68/124 (54%), Positives = 80/124 (64%) Frame = +2
Query: 2 LSVVYSAVRXXXXXXXXXXXXXXXXXTQKPLLPMQXXXXXXXXXXXXXHKPVTYVYSFFH 181 LSVVYSAVR KPLLP +PVTY YSFFH Sbjct: 293 LSVVYSAVRAGSSATVLSAPDSPRAGADKPLLPFSKADEEAEKKDVP--RPVTYSYSFFH 350
Query: 182 LIFALASMYSAMLLTGWTNARSDGSELIDVGWPSVWVRMITQWVTAGLFIWSLIAPLILP 361 LIF+LASMYSAMLLTGW+ + + +L+DVGWPSVWVR+ TQW TAGL+IWSL+APL+ P Sbjct: 351 LIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRIATQWATAGLYIWSLVAPLLFP 410
Query: 362 EREF 373 +REF Sbjct: 411 DREF 414
>tr|B8LQ32|B8LQ32_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 417
Score = 136 bits (343), Expect = 5e-31 Identities = 66/125 (52%), Positives = 82/125 (65%) Frame = +2
Query: 2 LSVVYSAVRXXXXXXXXXXXXXXXXXTQKPLLPMQXXXXXXXXXXXXXHKPVTYVYSFFH 181 LSVVYSAVR + KPLL +PVTY YSFFH Sbjct: 293 LSVVYSAVRAGSSTALLSPPSSPRAGSGKPLLSFDEIEEGHKNTQKDEERPVTYSYSFFH 352
Query: 182 LIFALASMYSAMLLTGWTNARSDGSELIDVGWPSVWVRMITQWVTAGLFIWSLIAPLILP 361 +IFALASMYSAMLLTGWT++ +DG +LI VGW +VWVR+ T+W+TA L+IWSL+APL+ P Sbjct: 353 VIFALASMYSAMLLTGWTSSTADGEKLIGVGWHTVWVRICTEWITAALYIWSLVAPLLFP 412
Query: 362 EREFY 376 +REF+ Sbjct: 413 DREFF 417
>tr|A6MZY1|A6MZY1_ORYSI Serine incorporator 3 (Fragment) OS=Oryza sativa subsp. indica PE=2 SV=1 Length = 220
Score = 136 bits (343), Expect = 5e-31 Identities = 68/124 (54%), Positives = 80/124 (64%) Frame = +2
Query: 2 LSVVYSAVRXXXXXXXXXXXXXXXXXTQKPLLPMQXXXXXXXXXXXXXHKPVTYVYSFFH 181 LSVVYSAVR KPLLP +PVTY YSFFH Sbjct: 99 LSVVYSAVRAGSSATVLSAPDSPRAGADKPLLPFSKADEEAEKKDVP--RPVTYSYSFFH 156
Query: 182 LIFALASMYSAMLLTGWTNARSDGSELIDVGWPSVWVRMITQWVTAGLFIWSLIAPLILP 361 LIF+LASMYSAMLLTGW+ + + +L+DVGWPSVWVR+ TQW TAGL+IWSL+APL+ P Sbjct: 157 LIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRIATQWATAGLYIWSLVAPLLFP 216
Query: 362 EREF 373 +REF Sbjct: 217 DREF 220
>tr|A3AC70|A3AC70_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_008392 PE=4 SV=1 Length = 414
Score = 136 bits (343), Expect = 5e-31 Identities = 68/124 (54%), Positives = 80/124 (64%) Frame = +2
Query: 2 LSVVYSAVRXXXXXXXXXXXXXXXXXTQKPLLPMQXXXXXXXXXXXXXHKPVTYVYSFFH 181 LSVVYSAVR KPLLP +PVTY YSFFH Sbjct: 293 LSVVYSAVRAGSSATVLSAPDSPRAGADKPLLPFSKADEEAEKKDVP--RPVTYSYSFFH 350
Query: 182 LIFALASMYSAMLLTGWTNARSDGSELIDVGWPSVWVRMITQWVTAGLFIWSLIAPLILP 361 LIF+LASMYSAMLLTGW+ + + +L+DVGWPSVWVR+ TQW TAGL+IWSL+APL+ P Sbjct: 351 LIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRIATQWATAGLYIWSLVAPLLFP 410
Query: 362 EREF 373 +REF Sbjct: 411 DREF 414
>tr|A2XAH1|A2XAH1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_09251 PE=4 SV=1 Length = 414
Score = 136 bits (343), Expect = 5e-31 Identities = 68/124 (54%), Positives = 80/124 (64%) Frame = +2
Query: 2 LSVVYSAVRXXXXXXXXXXXXXXXXXTQKPLLPMQXXXXXXXXXXXXXHKPVTYVYSFFH 181 LSVVYSAVR KPLLP +PVTY YSFFH Sbjct: 293 LSVVYSAVRAGSSATVLSAPDSPRAGADKPLLPFSKADEEAEKKDVP--RPVTYSYSFFH 350
Query: 182 LIFALASMYSAMLLTGWTNARSDGSELIDVGWPSVWVRMITQWVTAGLFIWSLIAPLILP 361 LIF+LASMYSAMLLTGW+ + + +L+DVGWPSVWVR+ TQW TAGL+IWSL+APL+ P Sbjct: 351 LIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRIATQWATAGLYIWSLVAPLLFP 410
Query: 362 EREF 373 +REF Sbjct: 411 DREF 414
>tr|A9PI15|A9PI15_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 414
Score = 135 bits (340), Expect = 1e-30 Identities = 66/124 (53%), Positives = 81/124 (65%) Frame = +2
Query: 2 LSVVYSAVRXXXXXXXXXXXXXXXXXTQKPLLPMQXXXXXXXXXXXXXHKPVTYVYSFFH 181 LSVVYSAVR KPLLP+ KPVTY YSFFH Sbjct: 293 LSVVYSAVRAGSSTTLLSPPSSPRAGADKPLLPLDNKPSEKEEKEKA--KPVTYSYSFFH 350
Query: 182 LIFALASMYSAMLLTGWTNARSDGSELIDVGWPSVWVRMITQWVTAGLFIWSLIAPLILP 361 +IF+LASMYSAMLLTGW+ + + +L+DVGWPSVWVR++T W TAGL+IWSL+AP++ P Sbjct: 351 IIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAGLYIWSLVAPILFP 410
Query: 362 EREF 373 +REF Sbjct: 411 DREF 414
>tr|B8A2U3|B8A2U3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 413
Score = 134 bits (337), Expect = 3e-30 Identities = 69/124 (55%), Positives = 81/124 (65%) Frame = +2
Query: 2 LSVVYSAVRXXXXXXXXXXXXXXXXXTQKPLLPMQXXXXXXXXXXXXXHKPVTYVYSFFH 181 LSVVYSAVR T KPLLP +PVTY YSFFH Sbjct: 293 LSVVYSAVRAGSSATVLSPPDSPRG-TDKPLLPFSKADEQEDKKDVP--RPVTYSYSFFH 349
Query: 182 LIFALASMYSAMLLTGWTNARSDGSELIDVGWPSVWVRMITQWVTAGLFIWSLIAPLILP 361 LIF+LASMYSAMLLTGW+ + + +L+DVGWPSVWVR+ TQW TAGLFIWSL+AP++ P Sbjct: 350 LIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRIATQWATAGLFIWSLVAPVLFP 409
Query: 362 EREF 373 +REF Sbjct: 410 DREF 413
>tr|B4F9D1|B4F9D1_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 413
Score = 134 bits (337), Expect = 3e-30 Identities = 69/124 (55%), Positives = 81/124 (65%) Frame = +2
Query: 2 LSVVYSAVRXXXXXXXXXXXXXXXXXTQKPLLPMQXXXXXXXXXXXXXHKPVTYVYSFFH 181 LSVVYSAVR T KPLLP +PVTY YSFFH Sbjct: 293 LSVVYSAVRAGSSATVLSPPDSPRG-TDKPLLPFSKADEQEDKKDVP--RPVTYSYSFFH 349
Query: 182 LIFALASMYSAMLLTGWTNARSDGSELIDVGWPSVWVRMITQWVTAGLFIWSLIAPLILP 361 LIF+LASMYSAMLLTGW+ + + +L+DVGWPSVWVR+ TQW TAGLFIWSL+AP++ P Sbjct: 350 LIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRIATQWATAGLFIWSLVAPVLFP 409
Query: 362 EREF 373 +REF Sbjct: 410 DREF 413
>tr|B4FAN1|B4FAN1_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 415
Score = 131 bits (330), Expect = 2e-29 Identities = 67/124 (54%), Positives = 83/124 (66%) Frame = +2
Query: 2 LSVVYSAVRXXXXXXXXXXXXXXXXXTQKPLLPMQXXXXXXXXXXXXXHKPVTYVYSFFH 181 LSVVYSAVR + PLL + +PV+Y Y+FFH Sbjct: 293 LSVVYSAVRAGSSTTFLSPPSSPRSGAKNPLLGDEEDGKGDGKESEP--RPVSYSYTFFH 350
Query: 182 LIFALASMYSAMLLTGWTNARSDGSELIDVGWPSVWVRMITQWVTAGLFIWSLIAPLILP 361 LIFALASMYSAMLLTGWT+A S+ SEL+DVGW +VWVR+ T+WVTAGL+IW+LIAPL+ P Sbjct: 351 LIFALASMYSAMLLTGWTSAASESSELMDVGWTTVWVRICTEWVTAGLYIWTLIAPLLFP 410
Query: 362 EREF 373 +R+F Sbjct: 411 DRDF 414
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