DK946353
Clone id YMU02A01NGRL0012_F14
Library
Length 496
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0012_F14. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
TATCGTAGCGGGTATAGTTTAGTGGTAAAAGTGTGACTCGTCTCGCAGTGATTTTGATAG
TTGAGGGATCGTATCTCGGCTAAATTAACTGAAAGAAAAAAACTTTACCTTCGCAGAAAA
TATGTGTTTTCTTATTATTTCTCCAAAATTAGAGGTAGATTAATCAATCTCGTCACTCAT
TCATTTCAAGAACTAGGGAAGATAGTGACGAAGCAGAATTGTTTTGGTACCCCAAGAAAT
ACTTGGTTTAATTTCTACTTCCGGGGAGATAAATAAAGAAAAAAAATCTATGGGTAGACG
TCTAAGATAGCTGACTCATCGTCACTAAACCTCAGAGAATAAATCTGGGAAAGAAAGTTG
GAATAAATAAATCCGGGTTTGTCAAGATTATTGAACATCTATTTGGTTGAACGGGATCCC
TCGTTTCAACAACTCGGTGAGATATATTTCCCTAAGGGTTTTTTCCCAAAAAAAAAAAAA
AAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q6GN91
Definition sp|Q6GN91|NT5D3_XENLA 5'-nucleotidase domain-containing protein 3 OS=Xenopus laevis
Align length 42
Score (bit) 29.6
E-value 6.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946353|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0012_F14, 5'
(467 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6GN91|NT5D3_XENLA 5'-nucleotidase domain-containing protein ... 30 6.8

>sp|Q6GN91|NT5D3_XENLA 5'-nucleotidase domain-containing protein 3
OS=Xenopus laevis GN=nt5dc3 PE=2 SV=1
Length = 499

Score = 29.6 bits (65), Expect = 6.8
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -1

Query: 125 TYFLRR*SFFLSVNLAEIRS-LNYQNHCETSHTFTTKLYPLR 3
TYFLRR S F + + + S LNY H HTF K PL+
Sbjct: 435 TYFLRRLSRFADIYMESLSSLLNYDLH----HTFYPKRTPLQ 472


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946353|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0012_F14, 5'
(467 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******