DK946358
Clone id YMU02A01NGRL0012_F20
Library
Length 176
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0012_F20. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GGAAGTCCTGGAAGAAAAGGGGGGCTTACCTACTAAATATCTGACGTGGCAGAAGGGATC
TCCCAGAGACAAGAAGGGATGATATATTGGAACGACAAGCAGGGAGGAGAAAGAATTGGG
CAAAAATGATGAATAGAATAAATTGAAAGAAAAGTAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946358|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0012_F20, 5'
(145 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id Q53N99
Definition tr|Q53N99|Q53N99_ORYSJ Os11g0245200 protein OS=Oryza sativa subsp. japonica
Align length 29
Score (bit) 35.0
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946358|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0012_F20, 5'
(145 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q53N99|Q53N99_ORYSJ Os11g0245200 protein OS=Oryza sativa subs... 35 1.9
tr|B8BJW1|B8BJW1_ORYSI Putative uncharacterized protein OS=Oryza... 35 1.9
tr|A3CA56|A3CA56_ORYSJ Putative uncharacterized protein OS=Oryza... 35 1.9

>tr|Q53N99|Q53N99_ORYSJ Os11g0245200 protein OS=Oryza sativa subsp.
japonica GN=Os11g0245200 PE=4 SV=1
Length = 897

Score = 35.0 bits (79), Expect = 1.9
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -3

Query: 140 YSIHHFCPILSPPCLSFQYIIPSCLWEIP 54
YS CP L P CLS QY+ P+C +P
Sbjct: 352 YSTQSICPGLPPTCLSDQYLSPNCTCAVP 380


>tr|B8BJW1|B8BJW1_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_35675 PE=4 SV=1
Length = 954

Score = 35.0 bits (79), Expect = 1.9
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -3

Query: 140 YSIHHFCPILSPPCLSFQYIIPSCLWEIP 54
YS CP L P CLS QY+ P+C +P
Sbjct: 427 YSTQSICPGLPPTCLSDQYLSPNCTCAVP 455


>tr|A3CA56|A3CA56_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_032178 PE=4 SV=1
Length = 893

Score = 35.0 bits (79), Expect = 1.9
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -3

Query: 140 YSIHHFCPILSPPCLSFQYIIPSCLWEIP 54
YS CP L P CLS QY+ P+C +P
Sbjct: 352 YSTQSICPGLPPTCLSDQYLSPNCTCAVP 380