DK946359
Clone id YMU02A01NGRL0012_F21
Library
Length 199
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0012_F21. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GTGTCCAGAAGCCCTCTGTCTAAACTTTCTTAAAGCAAGCCAATTTAGTTGGCATGAATG
CCTGCTTCCCATTTCCCACTGGCGCCTAACAAGCCTGCACTTATGAGCTTTTGTGTCCCA
GCCACTTTGCATACATAATGAAACAACTTCCCAGTGGTGGCTTCACTGCTCAAAAAAAAA
AAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946359|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0012_F21, 5'
(171 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id B7PRZ6
Definition tr|B7PRZ6|B7PRZ6_IXOSC Protein NUF1, putative OS=Ixodes scapularis
Align length 47
Score (bit) 32.7
E-value 9.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946359|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0012_F21, 5'
(171 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B7PRZ6|B7PRZ6_IXOSC Protein NUF1, putative OS=Ixodes scapular... 33 9.2

>tr|B7PRZ6|B7PRZ6_IXOSC Protein NUF1, putative OS=Ixodes scapularis
GN=IscW_ISCW007413 PE=4 SV=1
Length = 1069

Score = 32.7 bits (73), Expect = 9.2
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Frame = -1

Query: 129 QSGWDTKAHKCRLVRRQWEMGSR----HSCQLNWLALRKFRQRASGH 1
Q+ W+T+ + WE+ SR SC + W + R R+ A H
Sbjct: 844 QASWETRVRELEQTLANWELSSRWRPPRSCSVGWKSSRSRRRGAEAH 890