DK946388
Clone id YMU02A01NGRL0012_H10
Library
Length 240
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0012_H10. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GTAATTTGCCCTTTTTAAATTATGCTATTGACTAAACTCAAGCCAGAACTAGCTGTTTGG
ATTCCTCTGGATCCAAGTTTTAAGGCTTTTTTTTGCTGTGTATCATGTAATGTCAGAATT
TTATTTTATATGGATGGAAAGTTTTTGCATTAAGTATTTTTGTTTGTTTTAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q54EF7
Definition sp|Q54EF7|Y5454_DICDI Uncharacterized transmembrane protein DDB_G0291640 OS=Dictyostelium discoideum
Align length 53
Score (bit) 32.0
E-value 0.98
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946388|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0012_H10, 5'
(170 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q54EF7|Y5454_DICDI Uncharacterized transmembrane protein DDB_... 32 0.98

>sp|Q54EF7|Y5454_DICDI Uncharacterized transmembrane protein
DDB_G0291640 OS=Dictyostelium discoideum GN=DDB_G0291640
PE=4 SV=1
Length = 59

Score = 32.0 bits (71), Expect = 0.98
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +2

Query: 11 LFKLCY*LNSSQN*LFGFLWIQVLRLFFAVYHVMSEFYFIWMESFCIKYFCLF 169
LF LC + + F L + +L++FF +H F+F + F +F F
Sbjct: 5 LFTLCVYITIVNDFFFYILLLLLLKIFFFFFHFPFSFFFFFFPFFFFSFFFFF 57


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946388|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0012_H10, 5'
(170 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******