DK946417
Clone id YMU02A01NGRL0012_I23
Library
Length 206
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0012_I23. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GTAGAAAGGCTTGGCCTTCTTTCTAAGGCTGAAGGTCTTGGAGTCTTATCTGCAGCAACG
AACCCAAGTACCCCTGGGACTTTGTTGACGCTTGCCTTGGTTTTGCTCGCAGGGGGTCCG
GCTTTTGTTTACTTTGTCCCAGAAGATGCAATCTGGCAGATAGTTGTGCAGTCAGAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946417|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0012_I23, 5'
(175 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id Q9SD79
Definition tr|Q9SD79|Q9SD79_ARATH Putative uncharacterized protein F13G24.250 OS=Arabidopsis thaliana
Align length 57
Score (bit) 54.3
E-value 3.0e-06
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946417|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0012_I23, 5'
(175 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q9SD79|Q9SD79_ARATH Putative uncharacterized protein F13G24.2... 54 3e-06
tr|Q8VYV1|Q8VYV1_ARATH AT5g08050/F13G24_250 OS=Arabidopsis thali... 54 3e-06
tr|A9S2G0|A9S2G0_PHYPA Predicted protein (Fragment) OS=Physcomit... 50 6e-05
tr|A9NMI1|A9NMI1_PICSI Putative uncharacterized protein OS=Picea... 50 6e-05
tr|Q2QN86|Q2QN86_ORYSJ Os12g0575000 protein OS=Oryza sativa subs... 49 2e-04
tr|B8BMN2|B8BMN2_ORYSI Putative uncharacterized protein OS=Oryza... 49 2e-04
tr|A3CIP9|A3CIP9_ORYSJ Putative uncharacterized protein OS=Oryza... 49 2e-04
tr|B4FV96|B4FV96_MAIZE Putative uncharacterized protein OS=Zea m... 48 2e-04
tr|A9PGF4|A9PGF4_POPTR Putative uncharacterized protein OS=Popul... 48 2e-04
tr|A7QI04|A7QI04_VITVI Chromosome chr17 scaffold_101, whole geno... 45 0.002
tr|A2ZE10|A2ZE10_ORYSI Putative uncharacterized protein OS=Oryza... 39 0.17

>tr|Q9SD79|Q9SD79_ARATH Putative uncharacterized protein F13G24.250
OS=Arabidopsis thaliana GN=F13G24.250 PE=4 SV=1
Length = 158

Score = 54.3 bits (129), Expect = 3e-06
Identities = 27/57 (47%), Positives = 32/57 (56%)
Frame = +1

Query: 1 VERLGLLSKAEGLGVLSAATNPSXXXXXXXXXXXXXXXXXXFVYFVPEDAIWQIVVQ 171
+ERLGLL+KAE GVLSAATNP F Y VPED W++V+Q
Sbjct: 74 IERLGLLTKAEEFGVLSAATNPETPGTLFTLSLGLLLLGPVFAYVVPEDYTWEVVIQ 130


>tr|Q8VYV1|Q8VYV1_ARATH AT5g08050/F13G24_250 OS=Arabidopsis thaliana
PE=2 SV=1
Length = 158

Score = 54.3 bits (129), Expect = 3e-06
Identities = 27/57 (47%), Positives = 32/57 (56%)
Frame = +1

Query: 1 VERLGLLSKAEGLGVLSAATNPSXXXXXXXXXXXXXXXXXXFVYFVPEDAIWQIVVQ 171
+ERLGLL+KAE GVLSAATNP F Y VPED W++V+Q
Sbjct: 74 IERLGLLTKAEEFGVLSAATNPETPGTLFTLSLGLLLLGPVFAYVVPEDYTWEVVIQ 130


>tr|A9S2G0|A9S2G0_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_123160 PE=4 SV=1
Length = 119

Score = 50.1 bits (118), Expect = 6e-05
Identities = 29/57 (50%), Positives = 33/57 (57%)
Frame = +1

Query: 1 VERLGLLSKAEGLGVLSAATNPSXXXXXXXXXXXXXXXXXXFVYFVPEDAIWQIVVQ 171
+E LGLLSKAE LGVLSAATNP+ FVYFVPE + IV+Q
Sbjct: 35 IESLGLLSKAEELGVLSAATNPATPGALLTTALALLLLGPVFVYFVPETSTPLIVLQ 91


>tr|A9NMI1|A9NMI1_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 183

Score = 50.1 bits (118), Expect = 6e-05
Identities = 24/57 (42%), Positives = 34/57 (59%)
Frame = +1

Query: 1 VERLGLLSKAEGLGVLSAATNPSXXXXXXXXXXXXXXXXXXFVYFVPEDAIWQIVVQ 171
+E LGLLSKAE LG+LS+AT+P+ VYFVP+D+ W++ +Q
Sbjct: 99 IESLGLLSKAEELGILSSATDPNTPGALLNLAIALLIAGPLCVYFVPDDSSWEVALQ 155


>tr|Q2QN86|Q2QN86_ORYSJ Os12g0575000 protein OS=Oryza sativa subsp.
japonica GN=Os12g0575000 PE=2 SV=1
Length = 190

Score = 48.5 bits (114), Expect = 2e-04
Identities = 27/58 (46%), Positives = 32/58 (55%)
Frame = +1

Query: 1 VERLGLLSKAEGLGVLSAATNPSXXXXXXXXXXXXXXXXXXFVYFVPEDAIWQIVVQS 174
VERLGLLSKAE L VLSAAT+P VY VPE+ W++ VQ+
Sbjct: 105 VERLGLLSKAEELEVLSAATDPGTPGALLGVALLLLAAGPAVVYLVPEEYPWEVAVQA 162


>tr|B8BMN2|B8BMN2_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_38846 PE=4 SV=1
Length = 190

Score = 48.5 bits (114), Expect = 2e-04
Identities = 27/58 (46%), Positives = 32/58 (55%)
Frame = +1

Query: 1 VERLGLLSKAEGLGVLSAATNPSXXXXXXXXXXXXXXXXXXFVYFVPEDAIWQIVVQS 174
VERLGLLSKAE L VLSAAT+P VY VPE+ W++ VQ+
Sbjct: 105 VERLGLLSKAEELEVLSAATDPGTPGALLGVALLLLAAGPAVVYLVPEEYPWEVAVQA 162


>tr|A3CIP9|A3CIP9_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_035171 PE=4 SV=1
Length = 197

Score = 48.5 bits (114), Expect = 2e-04
Identities = 27/58 (46%), Positives = 32/58 (55%)
Frame = +1

Query: 1 VERLGLLSKAEGLGVLSAATNPSXXXXXXXXXXXXXXXXXXFVYFVPEDAIWQIVVQS 174
VERLGLLSKAE L VLSAAT+P VY VPE+ W++ VQ+
Sbjct: 112 VERLGLLSKAEELEVLSAATDPGTPGALLGVALLLLAAGPAVVYLVPEEYPWEVAVQA 169


>tr|B4FV96|B4FV96_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 193

Score = 48.1 bits (113), Expect = 2e-04
Identities = 25/58 (43%), Positives = 31/58 (53%)
Frame = +1

Query: 1 VERLGLLSKAEGLGVLSAATNPSXXXXXXXXXXXXXXXXXXFVYFVPEDAIWQIVVQS 174
+ERLGLLSK E LG LSAAT+P VY VPE+ WQ+ +Q+
Sbjct: 108 MERLGLLSKLEELGALSAATDPGTPGALLALALPLLAAGPAVVYLVPEEQAWQVALQA 165


>tr|A9PGF4|A9PGF4_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 194

Score = 48.1 bits (113), Expect = 2e-04
Identities = 25/57 (43%), Positives = 31/57 (54%)
Frame = +1

Query: 1 VERLGLLSKAEGLGVLSAATNPSXXXXXXXXXXXXXXXXXXFVYFVPEDAIWQIVVQ 171
+E+LGLLSKAE LGVLSAAT+P Y VPED W++ +Q
Sbjct: 110 IEKLGLLSKAEELGVLSAATDPGTPGALLSLSLGLLFLGPSCAYLVPEDYPWEVALQ 166


>tr|A7QI04|A7QI04_VITVI Chromosome chr17 scaffold_101, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00000042001
PE=4 SV=1
Length = 206

Score = 44.7 bits (104), Expect = 0.002
Identities = 22/57 (38%), Positives = 30/57 (52%)
Frame = +1

Query: 1 VERLGLLSKAEGLGVLSAATNPSXXXXXXXXXXXXXXXXXXFVYFVPEDAIWQIVVQ 171
+E+LGLLSKAE G+LSAAT+P + VPED W++ +Q
Sbjct: 122 IEKLGLLSKAEEFGILSAATDPGTPGALLSLSLVLLLLGPSCAFLVPEDYPWEVALQ 178