Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK946446|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0012_K16, 5' (329 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl... 129 6e-30 sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop... 122 4e-28 sp|P10707|CB2D_SOLLC Chlorophyll a-b binding protein 1D (Fragmen... 83 5e-16 sp|P14275|CB2C_SOLLC Chlorophyll a-b binding protein 1C, chlorop... 83 5e-16 sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop... 83 5e-16 sp|P14274|CB2A_SOLLC Chlorophyll a-b binding protein 1A, chlorop... 83 5e-16 sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl... 83 5e-16 sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop... 83 5e-16 sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro... 83 5e-16 sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloropl... 83 5e-16 sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop... 83 5e-16 sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop... 83 5e-16 sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl... 83 5e-16 sp|P08222|CB22_CUCSA Chlorophyll a-b binding protein of LHCII ty... 83 5e-16 sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop... 83 5e-16 sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty... 83 5e-16 sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor... 82 6e-16 sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop... 82 8e-16 sp|P14277|CB2F_SOLLC Chlorophyll a-b binding protein 3B, chlorop... 82 8e-16 sp|P14276|CB2E_SOLLC Chlorophyll a-b binding protein 3A, chlorop... 82 8e-16 sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb... 82 8e-16 sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas... 82 8e-16 sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro... 82 8e-16 sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop... 82 8e-16 sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloropl... 82 8e-16 sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl... 82 8e-16 sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloropl... 82 8e-16 sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloropl... 82 8e-16 sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl... 82 8e-16 sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180, ch... 82 8e-16
>sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1 Length = 245
Score = 129 bits (323), Expect = 6e-30 Identities = 56/76 (73%), Positives = 67/76 (88%) Frame = +1
Query: 1 YPGGPFDPLGFSKDVKKFEEYKVKELKNGRLALIAFVGFAIQAAAYPGTGPLENLATHLA 180 YPGG FDPLGFSKD KFEE K+KE+KNGRLA++AFVGF +Q +AYPGTGPLENLATHLA Sbjct: 167 YPGGAFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLA 226
Query: 181 DPWSKNISEVLIPRSV 228 DPW NI +++IPR++ Sbjct: 227 DPWHNNIGDIVIPRNI 242
>sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1 Length = 246
Score = 122 bits (307), Expect = 4e-28 Identities = 55/76 (72%), Positives = 64/76 (84%) Frame = +1
Query: 1 YPGGPFDPLGFSKDVKKFEEYKVKELKNGRLALIAFVGFAIQAAAYPGTGPLENLATHLA 180 YPGG FDPLG+SKD KFEE KVKE+KNGRLAL+A VGF +Q +AY GTGPLENLATHLA Sbjct: 168 YPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLGTGPLENLATHLA 227
Query: 181 DPWSKNISEVLIPRSV 228 DPW NI +V+IP+ + Sbjct: 228 DPWHNNIGDVIIPKGI 243
>sp|P10707|CB2D_SOLLC Chlorophyll a-b binding protein 1D (Fragment) OS=Solanum lycopersicum GN=CAB1D PE=3 SV=1 Length = 116
Score = 82.8 bits (203), Expect = 5e-16 Identities = 40/66 (60%), Positives = 48/66 (72%) Frame = +1
Query: 1 YPGGPFDPLGFSKDVKKFEEYKVKELKNGRLALIAFVGFAIQAAAYPGTGPLENLATHLA 180 YPGG FDPLG ++D + F E KVKE+KNGRLA+ + GF +QA G GPLENLA HLA Sbjct: 40 YPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV-TGKGPLENLADHLA 98
Query: 181 DPWSKN 198 DP + N Sbjct: 99 DPVNNN 104
>sp|P14275|CB2C_SOLLC Chlorophyll a-b binding protein 1C, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1C PE=3 SV=1 Length = 265
Score = 82.8 bits (203), Expect = 5e-16 Identities = 40/66 (60%), Positives = 48/66 (72%) Frame = +1
Query: 1 YPGGPFDPLGFSKDVKKFEEYKVKELKNGRLALIAFVGFAIQAAAYPGTGPLENLATHLA 180 YPGG FDPLG ++D + F E KVKE+KNGRLA+ + GF +QA G GPLENLA HLA Sbjct: 189 YPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV-TGKGPLENLADHLA 247
Query: 181 DPWSKN 198 DP + N Sbjct: 248 DPVNNN 253
>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1 Length = 265
Score = 82.8 bits (203), Expect = 5e-16 Identities = 40/66 (60%), Positives = 48/66 (72%) Frame = +1
Query: 1 YPGGPFDPLGFSKDVKKFEEYKVKELKNGRLALIAFVGFAIQAAAYPGTGPLENLATHLA 180 YPGG FDPLG ++D + F E KVKE+KNGRLA+ + GF +QA G GPLENLA HLA Sbjct: 189 YPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV-TGKGPLENLADHLA 247
Query: 181 DPWSKN 198 DP + N Sbjct: 248 DPVNNN 253
>sp|P14274|CB2A_SOLLC Chlorophyll a-b binding protein 1A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1A PE=3 SV=1 Length = 265
Score = 82.8 bits (203), Expect = 5e-16 Identities = 40/66 (60%), Positives = 48/66 (72%) Frame = +1
Query: 1 YPGGPFDPLGFSKDVKKFEEYKVKELKNGRLALIAFVGFAIQAAAYPGTGPLENLATHLA 180 YPGG FDPLG ++D + F E KVKE+KNGRLA+ + GF +QA G GPLENLA HLA Sbjct: 189 YPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV-TGKGPLENLADHLA 247
Query: 181 DPWSKN 198 DP + N Sbjct: 248 DPVNNN 253
>sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1 Length = 266
Score = 82.8 bits (203), Expect = 5e-16 Identities = 40/66 (60%), Positives = 48/66 (72%) Frame = +1
Query: 1 YPGGPFDPLGFSKDVKKFEEYKVKELKNGRLALIAFVGFAIQAAAYPGTGPLENLATHLA 180 YPGG FDPLG ++D + F E KVKE+KNGRLA+ + GF +QA G GPLENLA HLA Sbjct: 190 YPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQALV-TGKGPLENLADHLA 248
Query: 181 DPWSKN 198 DP + N Sbjct: 249 DPVNNN 254
>sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1 Length = 267
Score = 82.8 bits (203), Expect = 5e-16 Identities = 40/66 (60%), Positives = 48/66 (72%) Frame = +1
Query: 1 YPGGPFDPLGFSKDVKKFEEYKVKELKNGRLALIAFVGFAIQAAAYPGTGPLENLATHLA 180 YPGG FDPLG ++D + F E KVKE+KNGRLA+ + GF +QA G GPLENLA HLA Sbjct: 191 YPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV-TGKGPLENLADHLA 249
Query: 181 DPWSKN 198 DP + N Sbjct: 250 DPVNNN 255
>sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1 Length = 267
Score = 82.8 bits (203), Expect = 5e-16 Identities = 40/66 (60%), Positives = 48/66 (72%) Frame = +1
Query: 1 YPGGPFDPLGFSKDVKKFEEYKVKELKNGRLALIAFVGFAIQAAAYPGTGPLENLATHLA 180 YPGG FDPLG ++D + F E KVKE+KNGRLA+ + GF +QA G GPLENLA HLA Sbjct: 191 YPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV-TGKGPLENLADHLA 249
Query: 181 DPWSKN 198 DP + N Sbjct: 250 DPVNNN 255
>sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1 Length = 267
Score = 82.8 bits (203), Expect = 5e-16 Identities = 40/66 (60%), Positives = 48/66 (72%) Frame = +1
Query: 1 YPGGPFDPLGFSKDVKKFEEYKVKELKNGRLALIAFVGFAIQAAAYPGTGPLENLATHLA 180 YPGG FDPLG ++D + F E KVKE+KNGRLA+ + GF +QA G GPLENLA HLA Sbjct: 191 YPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV-TGKGPLENLADHLA 249
Query: 181 DPWSKN 198 DP + N Sbjct: 250 DPVNNN 255
|
Report |
|