DK946452 |
Clone id |
YMU02A01NGRL0012_K24 |
Library |
YMU02 |
Length |
496 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0012_K24. 5' end sequence. |
Accession |
DK946452 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL36Contig1 |
Sequence |
CTTCTCTCATTCCTTAACATCTGCTGCGGAATACTCGTCGGCGACAGCCATGGGTCGAAG ACCTGCAAGGTGCTACCGGCAGATTAAAAACAAGCCATATCCAAAATCTCGTTACTGTAG GGGTGTACCCGACCCAAAAATTCGTATATATGATGTTGGCATGAAGAAAAAGGGTGTTGA TGAGTTTCCCTTTTGTGTGCACCTTGTGAGTTGGGAGAAAGAAAATGTCTCCAGTGAAGG CCTGGAGGCAGCTCGTATTGCTTGCAACAAATACATGACAAAATTTGCTGGAAAGGATGC TTTTCATCTACGAGTTCGCGTGCACCCTTTCCATGTTCTTCGTATCAACAAGATGCTTTC ATGTGCCGGAGCTGATAGGCTCCAGACAGGAATGAGGGGTGCTTTTGGAAAGCCCCAGGG CACTTGTGCGCGAGTTGACATTGGGCAGGTCCTATTGAGCGTCCGCTGCAAGGACAATAA TGGTATACATGCCCAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SPB3 |
Definition |
sp|Q9SPB3|RL10_VITRI 60S ribosomal protein L10 OS=Vitis riparia |
Align length |
149 |
Score (bit) |
302.0 |
E-value |
5.0e-82 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QTC5 |
Definition |
tr|A7QTC5|A7QTC5_VITVI Chromosome chr1 scaffold_166, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
149 |
Score (bit) |
306.0 |
E-value |
4.0e-82 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK946452|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0012_K24, 5' (496 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7QTC5|A7QTC5_VITVI Chromosome chr1 scaffold_166, whole genom... 306 4e-82 tr|B6TD86|B6TD86_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 301 9e-81 tr|B6TAQ2|B6TAQ2_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 301 9e-81 tr|B6T5B9|B6T5B9_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 301 9e-81 tr|B4FPT8|B4FPT8_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 301 9e-81 tr|A9U2S2|A9U2S2_PHYPA Predicted protein OS=Physcomitrella paten... 301 9e-81 tr|A9TWJ0|A9TWJ0_PHYPA Predicted protein OS=Physcomitrella paten... 301 9e-81 tr|A9RQA3|A9RQA3_PHYPA Predicted protein OS=Physcomitrella paten... 301 9e-81 tr|Q6DV76|Q6DV76_9FABA QM family protein OS=Caragana jubata GN=Q... 300 2e-80 tr|Q9FUN3|Q9FUN3_ELAGV QM-like protein OS=Elaeis guineensis var.... 299 4e-80 tr|Q6DV42|Q6DV42_CAMSI QM-like protein OS=Camellia sinensis PE=2... 299 4e-80 tr|B6UGR9|B6UGR9_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 299 4e-80 tr|B7FGF8|B7FGF8_MEDTR Putative uncharacterized protein OS=Medic... 299 6e-80 tr|B7E5G0|B7E5G0_ORYSJ cDNA clone:001-035-D11, full insert seque... 299 6e-80 tr|B3TLM0|B3TLM0_ELAGV QM-like protein OS=Elaeis guineensis var.... 298 7e-80 tr|A9PGG5|A9PGG5_POPTR Putative uncharacterized protein OS=Popul... 297 2e-79 tr|A9P8W6|A9P8W6_POPTR Putative uncharacterized protein OS=Popul... 297 2e-79 tr|Q3SC85|Q3SC85_SOLLC 60S ribosomal protein L10 OS=Solanum lyco... 296 4e-79 tr|B8AYH0|B8AYH0_ORYSI Putative uncharacterized protein OS=Oryza... 296 5e-79 tr|B7EBT7|B7EBT7_ORYSJ cDNA clone:002-188-A02, full insert seque... 296 5e-79 tr|A3B0D3|A3B0D3_ORYSJ Putative uncharacterized protein OS=Oryza... 296 5e-79 tr|Q38HS5|Q38HS5_SOLTU 60S ribosomal protein L10-like protein OS... 295 8e-79 tr|Q7X9L9|Q7X9L9_WHEAT QM (Fragment) OS=Triticum aestivum PE=2 SV=2 294 1e-78 tr|A7NXZ2|A7NXZ2_VITVI Chromosome chr6 scaffold_3, whole genome ... 294 1e-78 tr|A9RCU9|A9RCU9_PHYPA Predicted protein (Fragment) OS=Physcomit... 293 2e-78 tr|A9NPP8|A9NPP8_PICSI Putative uncharacterized protein OS=Picea... 288 8e-77 tr|Q2HIH6|Q2HIH6_ARATH At1g26910 OS=Arabidopsis thaliana PE=2 SV=1 286 3e-76 tr|A9NPT9|A9NPT9_PICSI Putative uncharacterized protein OS=Picea... 284 2e-75 tr|A2XGB9|A2XGB9_ORYSI Putative uncharacterized protein OS=Oryza... 278 1e-73 tr|Q10LW7|Q10LW7_ORYSJ 60S ribosomal protein L10, putative, expr... 275 7e-73
>tr|A7QTC5|A7QTC5_VITVI Chromosome chr1 scaffold_166, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006249001 PE=4 SV=1 Length = 224
Score = 306 bits (784), Expect = 4e-82 Identities = 145/149 (97%), Positives = 146/149 (97%) Frame = +2
Query: 50 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 229 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
Query: 230 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 409 SSE LEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 410 KPQGTCARVDIGQVLLSVRCKDNNGIHAQ 496 KPQGTCARV+IGQVLLSVRCKD NG HAQ Sbjct: 121 KPQGTCARVNIGQVLLSVRCKDGNGNHAQ 149
>tr|B6TD86|B6TD86_MAIZE 60S ribosomal protein L10-3 OS=Zea mays PE=2 SV=1 Length = 220
Score = 301 bits (772), Expect = 9e-81 Identities = 142/148 (95%), Positives = 144/148 (97%) Frame = +2
Query: 50 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 229 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENV 60
Query: 230 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 409 SSE LEAARIACNKYMTK AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 410 KPQGTCARVDIGQVLLSVRCKDNNGIHA 493 KPQGTCARVDIGQVLLSVRCKDNN HA Sbjct: 121 KPQGTCARVDIGQVLLSVRCKDNNAAHA 148
>tr|B6TAQ2|B6TAQ2_MAIZE 60S ribosomal protein L10-3 OS=Zea mays PE=2 SV=1 Length = 220
Score = 301 bits (772), Expect = 9e-81 Identities = 142/148 (95%), Positives = 144/148 (97%) Frame = +2
Query: 50 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 229 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENV 60
Query: 230 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 409 SSE LEAARIACNKYMTK AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 410 KPQGTCARVDIGQVLLSVRCKDNNGIHA 493 KPQGTCARVDIGQVLLSVRCKDNN HA Sbjct: 121 KPQGTCARVDIGQVLLSVRCKDNNAAHA 148
>tr|B6T5B9|B6T5B9_MAIZE 60S ribosomal protein L10-3 OS=Zea mays PE=2 SV=1 Length = 220
Score = 301 bits (772), Expect = 9e-81 Identities = 142/148 (95%), Positives = 144/148 (97%) Frame = +2
Query: 50 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 229 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENV 60
Query: 230 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 409 SSE LEAARIACNKYMTK AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 410 KPQGTCARVDIGQVLLSVRCKDNNGIHA 493 KPQGTCARVDIGQVLLSVRCKDNN HA Sbjct: 121 KPQGTCARVDIGQVLLSVRCKDNNAAHA 148
>tr|B4FPT8|B4FPT8_MAIZE 60S ribosomal protein L10-3 OS=Zea mays PE=2 SV=1 Length = 220
Score = 301 bits (772), Expect = 9e-81 Identities = 142/148 (95%), Positives = 144/148 (97%) Frame = +2
Query: 50 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 229 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENV 60
Query: 230 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 409 SSE LEAARIACNKYMTK AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 410 KPQGTCARVDIGQVLLSVRCKDNNGIHA 493 KPQGTCARVDIGQVLLSVRCKDNN HA Sbjct: 121 KPQGTCARVDIGQVLLSVRCKDNNAAHA 148
>tr|A9U2S2|A9U2S2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_227764 PE=4 SV=1 Length = 223
Score = 301 bits (772), Expect = 9e-81 Identities = 141/149 (94%), Positives = 145/149 (97%) Frame = +2
Query: 50 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 229 MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFP+CVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENV 60
Query: 230 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 409 SSE LEAARIACNKYMTK+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 410 KPQGTCARVDIGQVLLSVRCKDNNGIHAQ 496 KPQG CARV IGQVLLSVRCKD NG+HAQ Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDQNGVHAQ 149
>tr|A9TWJ0|A9TWJ0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_172372 PE=4 SV=1 Length = 223
Score = 301 bits (772), Expect = 9e-81 Identities = 141/149 (94%), Positives = 145/149 (97%) Frame = +2
Query: 50 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 229 MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFP+CVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENV 60
Query: 230 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 409 SSE LEAARIACNKYMTK+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 410 KPQGTCARVDIGQVLLSVRCKDNNGIHAQ 496 KPQG CARV IGQVLLSVRCKD NG+HAQ Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDQNGVHAQ 149
>tr|A9RQA3|A9RQA3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_177230 PE=4 SV=1 Length = 223
Score = 301 bits (772), Expect = 9e-81 Identities = 141/149 (94%), Positives = 145/149 (97%) Frame = +2
Query: 50 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 229 MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFP+CVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENV 60
Query: 230 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 409 SSE LEAARIACNKYMTK+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 410 KPQGTCARVDIGQVLLSVRCKDNNGIHAQ 496 KPQG CARV IGQVLLSVRCKD NG+HAQ Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDQNGVHAQ 149
>tr|Q6DV76|Q6DV76_9FABA QM family protein OS=Caragana jubata GN=QM PE=2 SV=1 Length = 216
Score = 300 bits (769), Expect = 2e-80 Identities = 142/149 (95%), Positives = 144/149 (96%) Frame = +2
Query: 50 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 229 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60
Query: 230 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 409 SSE LEAARIACNKY+TKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYLTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 410 KPQGTCARVDIGQVLLSVRCKDNNGIHAQ 496 KPQGTCARV IGQVLLSVRCKD N HAQ Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDGNSHHAQ 149
>tr|Q9FUN3|Q9FUN3_ELAGV QM-like protein OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 224
Score = 299 bits (766), Expect = 4e-80 Identities = 142/149 (95%), Positives = 143/149 (95%) Frame = +2
Query: 50 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 229 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
Query: 230 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 409 SSE LEAARIACNKYM K+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 410 KPQGTCARVDIGQVLLSVRCKDNNGIHAQ 496 KPQGTCARV IGQVLLSVRCKD N HAQ Sbjct: 121 KPQGTCARVMIGQVLLSVRCKDGNSNHAQ 149
|