DK946477 |
Clone id |
YMU02A01NGRL0012_M05 |
Library |
YMU02 |
Length |
528 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0012_M05. 5' end sequence. |
Accession |
DK946477 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL1631Contig1 |
Sequence |
GGGGGGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCGCAATGGCGACCACCATTT TCTCCAAGTCGAGTCTGCTTCTGCAATCTGGAGACTACTCGACGACGCCCTCGCTGGCGT CTGCTTCTTCAAGGAGATGGAGGGGAGTGACGAGGATTATGGCCGAGGCCTCCAGCTCCT CGTCGACTGCAGCGGGAACGCCCATCAACCCGTCCATCAAGAAGCAGGAGGCCAAGGTTG TGGACACGGTGCTCATCTCCGACCTCCGAAAGCCTTTGCAGGCTTACTGCAGGTGTTGGA GATCTAAAACCTTCCCCCTTTGCGATGGAACACATGCCAAGCATAACAAGGAAACAGGGG ATAATGTTGGTCCCCTTCTTCTAAAGAAGTAGTTCAACAAACACACTACTCCTCTCACAT TCTAAGAAGTTGTATCTTTTTAGTGTAGACATAAATTTGCTTAATAGCCCTCTCATGGCT CTCTTTGCCTTTTGTAACCCAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6AZG1 |
Definition |
sp|Q6AZG1|CSD2B_XENLA CDGSH iron sulfur domain-containing protein 2-B OS=Xenopus laevis |
Align length |
62 |
Score (bit) |
90.1 |
E-value |
5.0e-18 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NJY3 |
Definition |
tr|A9NJY3|A9NJY3_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
94 |
Score (bit) |
113.0 |
E-value |
4.0e-24 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK946477|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0012_M05, 5' (500 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NJY3|A9NJY3_PICSI Putative uncharacterized protein OS=Picea... 113 4e-24 tr|A9TMW1|A9TMW1_PHYPA Predicted protein (Fragment) OS=Physcomit... 110 5e-23 tr|B6SQE2|B6SQE2_MAIZE Kinesin like protein OS=Zea mays PE=4 SV=1 109 6e-23 tr|B6SI08|B6SI08_MAIZE Kinesin like protein OS=Zea mays PE=4 SV=1 109 6e-23 tr|Q0D6L9|Q0D6L9_ORYSJ Os07g0467200 protein OS=Oryza sativa subs... 108 1e-22 tr|A2YL37|A2YL37_ORYSI Putative uncharacterized protein OS=Oryza... 108 1e-22 tr|A9TZ09|A9TZ09_PHYPA Predicted protein OS=Physcomitrella paten... 107 2e-22 tr|Q9FLI7|Q9FLI7_ARATH Arabidopsis thaliana genomic DNA, chromos... 100 3e-20 tr|A8HND3|A8HND3_CHLRE Predicted protein OS=Chlamydomonas reinha... 97 3e-19 tr|Q8LCD5|Q8LCD5_ARATH Putative uncharacterized protein OS=Arabi... 96 1e-18 tr|Q7T326|Q7T326_DANRE Novel protein (Zgc:64148) OS=Danio rerio ... 90 5e-17 tr|B6PW24|B6PW24_BRAFL Putative uncharacterized protein OS=Branc... 87 4e-16 tr|B6P4G6|B6P4G6_BRAFL Putative uncharacterized protein OS=Branc... 87 4e-16 tr|B5X8S2|B5X8S2_SALSA CDGSH iron sulfur domain-containing prote... 86 7e-16 tr|Q4SDL1|Q4SDL1_TETNG Chromosome 18 SCAF14637, whole genome sho... 86 1e-15 tr|B5KFU7|B5KFU7_TAEGU Putative uncharacterized protein OS=Taeni... 84 4e-15 tr|B5G483|B5G483_TAEGU Putative uncharacterized protein OS=Taeni... 84 4e-15 tr|Q6GLC0|Q6GLC0_XENTR MGC69453 protein OS=Xenopus tropicalis GN... 82 1e-14 tr|Q58EB0|Q58EB0_DANRE Zgc:110843 OS=Danio rerio GN=zgc:110843 P... 81 3e-14 tr|B4MBU8|B4MBU8_DROVI GJ14516 OS=Drosophila virilis GN=GJ14516 ... 81 3e-14 tr|Q6PGY7|Q6PGY7_DANRE Novel protein similar to H.sapiens CISD1,... 80 4e-14 tr|B4NFN4|B4NFN4_DROWI GK22673 OS=Drosophila willistoni GN=GK226... 80 4e-14 tr|B5X1R9|B5X1R9_SALSA CDGSH iron sulfur domain-containing prote... 80 5e-14 tr|B4QZI8|B4QZI8_DROSI GD17906 OS=Drosophila simulans GN=GD17906... 80 5e-14 tr|B4HZ81|B4HZ81_DROSE GM12252 OS=Drosophila sechellia GN=GM1225... 80 5e-14 tr|B3M1H7|B3M1H7_DROAN GF16608 OS=Drosophila ananassae GN=GF1660... 80 5e-14 tr|Q66J28|Q66J28_XENLA MGC82147 protein OS=Xenopus laevis GN=MGC... 80 7e-14 tr|B4GPI0|B4GPI0_DROPE GL13882 OS=Drosophila persimilis GN=GL138... 80 7e-14 tr|B4PQ50|B4PQ50_DROYA GE10465 OS=Drosophila yakuba GN=GE10465 P... 79 9e-14 tr|B3P5J1|B3P5J1_DROER GG12028 OS=Drosophila erecta GN=GG12028 P... 79 9e-14
>tr|A9NJY3|A9NJY3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1 Length = 107
Score = 113 bits (283), Expect = 4e-24 Identities = 55/94 (58%), Positives = 66/94 (70%), Gaps = 2/94 (2%) Frame = +3
Query: 114 LASASSRRWRGVTRIMXXXXXXXXXXXGTP--INPSIKKQEAKVVDTVLISDLRKPLQAY 287 L +SR++ TR++ GTP INPSI+K E KVVD V I++L KP+ Y Sbjct: 14 LRELASRQYAHNTRVVPKITVKGIRAEGTPATINPSIRKNEEKVVDNVPIAELSKPITPY 73
Query: 288 CRCWRSKTFPLCDGTHAKHNKETGDNVGPLLLKK 389 CRCWRS+TFPLCDG+H KHNK TGDNVGPLLLKK Sbjct: 74 CRCWRSQTFPLCDGSHVKHNKATGDNVGPLLLKK 107
>tr|A9TMW1|A9TMW1_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_9234 PE=4 SV=1 Length = 86
Score = 110 bits (274), Expect = 5e-23 Identities = 49/63 (77%), Positives = 53/63 (84%) Frame = +3
Query: 201 PINPSIKKQEAKVVDTVLISDLRKPLQAYCRCWRSKTFPLCDGTHAKHNKETGDNVGPLL 380 PINPSI+K KVVDTV +L KPL AYCRCWRS+TFPLC+G H KHNKETGDNVGPLL Sbjct: 24 PINPSIRKDSDKVVDTVQADELSKPLTAYCRCWRSETFPLCNGAHVKHNKETGDNVGPLL 83
Query: 381 LKK 389 LKK Sbjct: 84 LKK 86
>tr|B6SQE2|B6SQE2_MAIZE Kinesin like protein OS=Zea mays PE=4 SV=1 Length = 105
Score = 109 bits (273), Expect = 6e-23 Identities = 49/65 (75%), Positives = 55/65 (84%) Frame = +3
Query: 195 GTPINPSIKKQEAKVVDTVLISDLRKPLQAYCRCWRSKTFPLCDGTHAKHNKETGDNVGP 374 G INP+I+K+E KVVDTVL +L KPL AYCRCWRS TFPLCDG+H KHNK TGDNVGP Sbjct: 41 GGGINPAIRKEEDKVVDTVLTGELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGP 100
Query: 375 LLLKK 389 LL+KK Sbjct: 101 LLVKK 105
>tr|B6SI08|B6SI08_MAIZE Kinesin like protein OS=Zea mays PE=4 SV=1 Length = 105
Score = 109 bits (273), Expect = 6e-23 Identities = 49/65 (75%), Positives = 55/65 (84%) Frame = +3
Query: 195 GTPINPSIKKQEAKVVDTVLISDLRKPLQAYCRCWRSKTFPLCDGTHAKHNKETGDNVGP 374 G INP+I+K+E KVVDTVL +L KPL AYCRCWRS TFPLCDG+H KHNK TGDNVGP Sbjct: 41 GGGINPAIRKEEDKVVDTVLTGELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGP 100
Query: 375 LLLKK 389 LL+KK Sbjct: 101 LLVKK 105
>tr|Q0D6L9|Q0D6L9_ORYSJ Os07g0467200 protein OS=Oryza sativa subsp. japonica GN=Os07g0467200 PE=4 SV=1 Length = 109
Score = 108 bits (270), Expect = 1e-22 Identities = 48/62 (77%), Positives = 53/62 (85%) Frame = +3
Query: 204 INPSIKKQEAKVVDTVLISDLRKPLQAYCRCWRSKTFPLCDGTHAKHNKETGDNVGPLLL 383 INPSI+K+E KVVDTVL +L KPL YCRCWRS TFPLCDG+H KHNK TGDNVGPLL+ Sbjct: 48 INPSIRKEEEKVVDTVLAGELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLV 107
Query: 384 KK 389 KK Sbjct: 108 KK 109
>tr|A2YL37|A2YL37_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_25927 PE=4 SV=1 Length = 109
Score = 108 bits (270), Expect = 1e-22 Identities = 48/62 (77%), Positives = 53/62 (85%) Frame = +3
Query: 204 INPSIKKQEAKVVDTVLISDLRKPLQAYCRCWRSKTFPLCDGTHAKHNKETGDNVGPLLL 383 INPSI+K+E KVVDTVL +L KPL YCRCWRS TFPLCDG+H KHNK TGDNVGPLL+ Sbjct: 48 INPSIRKEEEKVVDTVLAGELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLV 107
Query: 384 KK 389 KK Sbjct: 108 KK 109
>tr|A9TZ09|A9TZ09_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_99153 PE=4 SV=1 Length = 112
Score = 107 bits (268), Expect = 2e-22 Identities = 48/62 (77%), Positives = 53/62 (85%) Frame = +3
Query: 204 INPSIKKQEAKVVDTVLISDLRKPLQAYCRCWRSKTFPLCDGTHAKHNKETGDNVGPLLL 383 INPSI+K KVVDTV ++L KPL AYCRCWRS+TFPLC+G H KHNKETGDNVGPLLL Sbjct: 51 INPSIRKDSDKVVDTVQANELSKPLTAYCRCWRSETFPLCNGAHVKHNKETGDNVGPLLL 110
Query: 384 KK 389 KK Sbjct: 111 KK 112
>tr|Q9FLI7|Q9FLI7_ARATH Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MIO24 (AT5g51720/MIO24_14) OS=Arabidopsis thaliana GN=At5g51720 PE=4 SV=1 Length = 108
Score = 100 bits (250), Expect = 3e-20 Identities = 44/65 (67%), Positives = 52/65 (80%) Frame = +3
Query: 195 GTPINPSIKKQEAKVVDTVLISDLRKPLQAYCRCWRSKTFPLCDGTHAKHNKETGDNVGP 374 G INP I+K E KVVD+V++++L K + YCRCWRS TFPLCDG+H KHNK GDNVGP Sbjct: 43 GGGINPEIRKNEDKVVDSVVVTELSKNITPYCRCWRSGTFPLCDGSHVKHNKANGDNVGP 102
Query: 375 LLLKK 389 LLLKK Sbjct: 103 LLLKK 107
>tr|A8HND3|A8HND3_CHLRE Predicted protein OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_190138 PE=4 SV=1 Length = 96
Score = 97.4 bits (241), Expect = 3e-19 Identities = 41/61 (67%), Positives = 47/61 (77%) Frame = +3
Query: 204 INPSIKKQEAKVVDTVLISDLRKPLQAYCRCWRSKTFPLCDGTHAKHNKETGDNVGPLLL 383 INPSI+K E KV D V + DL KP YCRCWRS FP+CDG H KHNKETGDNVGPL++ Sbjct: 31 INPSIRKSEEKVADFVKVEDLPKPKAVYCRCWRSSKFPMCDGAHVKHNKETGDNVGPLVI 90
Query: 384 K 386 + Sbjct: 91 E 91
>tr|Q8LCD5|Q8LCD5_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=4 SV=1 Length = 108
Score = 95.5 bits (236), Expect = 1e-18 Identities = 43/65 (66%), Positives = 51/65 (78%) Frame = +3
Query: 195 GTPINPSIKKQEAKVVDTVLISDLRKPLQAYCRCWRSKTFPLCDGTHAKHNKETGDNVGP 374 G INP I+K E KVVD+V++++L K + YCRC RS TFPLCDG+H KHNK GDNVGP Sbjct: 43 GGGINPEIRKNEDKVVDSVVVTELSKNITPYCRCRRSGTFPLCDGSHVKHNKANGDNVGP 102
Query: 375 LLLKK 389 LLLKK Sbjct: 103 LLLKK 107
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