DK946482 |
Clone id |
YMU02A01NGRL0012_M10 |
Library |
YMU02 |
Length |
518 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0012_M10. 5' end sequence. |
Accession |
DK946482 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL691Contig1 |
Sequence |
GGTGGAATGTTTCAATTAGTGTCCGAGTCCTTGGCAAGAATACTGTTCTTGAGCAACTCC CTCACTTTCATGATGGTGTACGTTTGGAGTAAACGCAACCCACACGTACACATGAGTTTT CTTGGACTTTTTACTTTTACGGCGCCCTACTTGCCTTGGGTGCTCCTTGGCTTTTCGATT ATTGTTGGGAGCAGTCCGTGGGTTGATCTTTTGGGCATGCTTGCGGGTCATGCTTACTAT TTCTTAGAAGATGTATATCCTCTCATGACTGGCCGCCACTTCTTAAAGACACCTGCCTTG TCAAGGCCCTTTTTCCAGAAGACACGGTGGTGGTCCCTAGACCAGCAAACGACAGGTGGG CTGATGGAGTCGATGGTGATCGTAGAGAGGATGCCCAAAGAGCTTTTTGAAAGGCTAAAT TTCAGCTTTCGAATGAGTGGAGCTGCAGCGAAGTTACAATTTGCACAAGGCTTGTCACTT CCGTGTTTGAATCTATCCGTGTGATACTTACTGCGGAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q851X7 |
Definition |
sp|Q851X7|DERL2_ORYSJ Derlin-2 OS=Oryza sativa subsp. japonica |
Align length |
105 |
Score (bit) |
174.0 |
E-value |
2.0e-43 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SDP4 |
Definition |
tr|A9SDP4|A9SDP4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
105 |
Score (bit) |
174.0 |
E-value |
2.0e-42 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK946482|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0012_M10, 5' (518 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SDP4|A9SDP4_PHYPA Predicted protein OS=Physcomitrella paten... 174 2e-42 tr|Q0DLQ3|Q0DLQ3_ORYSJ Os03g0852200 protein OS=Oryza sativa subs... 174 2e-42 tr|A3APU4|A3APU4_ORYSJ Putative uncharacterized protein OS=Oryza... 174 2e-42 tr|A2XP56|A2XP56_ORYSI Putative uncharacterized protein OS=Oryza... 174 2e-42 tr|B6TKJ7|B6TKJ7_MAIZE Derlin-2 OS=Zea mays PE=2 SV=1 174 3e-42 tr|B7FN17|B7FN17_MEDTR Putative uncharacterized protein OS=Medic... 173 5e-42 tr|A7R0M5|A7R0M5_VITVI Chromosome chr10 scaffold_312, whole geno... 172 9e-42 tr|A5AGW9|A5AGW9_VITVI Putative uncharacterized protein OS=Vitis... 172 9e-42 tr|A9TGM9|A9TGM9_PHYPA Predicted protein OS=Physcomitrella paten... 172 1e-41 tr|A4S6T5|A4S6T5_OSTLU Predicted protein OS=Ostreococcus lucimar... 134 4e-30 tr|Q16YT7|Q16YT7_AEDAE Putative uncharacterized protein (Fragmen... 126 6e-28 tr|A6N0P6|A6N0P6_ORYSI Derlin-2 (Fragment) OS=Oryza sativa subsp... 124 2e-27 tr|B3S6A7|B3S6A7_TRIAD Putative uncharacterized protein OS=Trich... 124 2e-27 tr|Q7Q4X4|Q7Q4X4_ANOGA AGAP000832-PA OS=Anopheles gambiae GN=AGA... 120 3e-26 tr|Q4VBS8|Q4VBS8_DANRE Zgc:110436 OS=Danio rerio GN=zgc:110436 P... 117 3e-25 tr|B6M5A1|B6M5A1_BRAFL Putative uncharacterized protein OS=Branc... 117 3e-25 tr|B5X6R0|B5X6R0_SALSA Derlin-2 OS=Salmo salar GN=DERL2 PE=2 SV=1 117 4e-25 tr|Q28F56|Q28F56_XENTR Der1-like domain family, member 3derlin-3... 115 1e-24 tr|A7RM47|A7RM47_NEMVE Predicted protein OS=Nematostella vectens... 115 1e-24 tr|Q5QNV2|Q5QNV2_MOUSE Der1-like domain family, member 2 OS=Mus ... 115 2e-24 tr|Q5QNV1|Q5QNV1_MOUSE Der1-like domain family, member 2 OS=Mus ... 115 2e-24 tr|Q3U957|Q3U957_MOUSE Putative uncharacterized protein OS=Mus m... 115 2e-24 tr|Q6P2A0|Q6P2A0_DANRE Der1-like domain family, member 3 OS=Dani... 113 5e-24 tr|Q4T1E2|Q4T1E2_TETNG Chromosome undetermined SCAF10660, whole ... 113 6e-24 tr|Q4T1E1|Q4T1E1_TETNG Chromosome undetermined SCAF10660, whole ... 113 6e-24 tr|B7G1Z6|B7G1Z6_PHATR Predicted protein OS=Phaeodactylum tricor... 112 8e-24 tr|B5DY45|B5DY45_DROPS GA26359 OS=Drosophila pseudoobscura pseud... 112 1e-23 tr|B5FZE4|B5FZE4_TAEGU Putative carcinoma related gene variant 3... 112 1e-23 tr|B4JFC0|B4JFC0_DROGR GH19287 OS=Drosophila grimshawi GN=GH1928... 112 1e-23 tr|B3M2T4|B3M2T4_DROAN GF16510 OS=Drosophila ananassae GN=GF1651... 112 1e-23
>tr|A9SDP4|A9SDP4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_106279 PE=4 SV=1 Length = 236
Score = 174 bits (442), Expect = 2e-42 Identities = 82/105 (78%), Positives = 89/105 (84%) Frame = +1
Query: 1 GGMFQLVSESLARILFLSNSLTFMMVYVWSKRNPHVHMSFLGLFTFTAPYLPWVLLGFSI 180 GG + + A ILFLSNSLTFMMVYVWSKRNPHV MSFLGLF+FTAPYLPWVLLGFS+ Sbjct: 113 GGGLLMFAAPFADILFLSNSLTFMMVYVWSKRNPHVQMSFLGLFSFTAPYLPWVLLGFSV 172
Query: 181 IVGSSPWVDLLGMLAGHAYYFLEDVYPLMTGRHFLKTPALSRPFF 315 +VGSSPWVDLLGM AGHAYYFLEDVYPLMTGR LKTP + + F Sbjct: 173 MVGSSPWVDLLGMAAGHAYYFLEDVYPLMTGRRILKTPGIIKALF 217
Score = 36.2 bits (82), Expect = 1.0 Identities = 20/45 (44%), Positives = 24/45 (53%) Frame = +3
Query: 213 GHACGSCLLFLRRCISSHDWPPLLKDTCLVKALFPEDTVVVPRPA 347 G A G FL +LK ++KALFPEDTV+V RPA Sbjct: 184 GMAAGHAYYFLEDVYPLMTGRRILKTPGIIKALFPEDTVLVARPA 228
>tr|Q0DLQ3|Q0DLQ3_ORYSJ Os03g0852200 protein OS=Oryza sativa subsp. japonica GN=Os03g0852200 PE=2 SV=1 Length = 249
Score = 174 bits (441), Expect = 2e-42 Identities = 82/105 (78%), Positives = 89/105 (84%) Frame = +1
Query: 1 GGMFQLVSESLARILFLSNSLTFMMVYVWSKRNPHVHMSFLGLFTFTAPYLPWVLLGFSI 180 GGM +SE+ ARILFLSNSLTFMMVYVWSK NP +HMSFLGLFTFTA YLPWVLLGFSI Sbjct: 114 GGMIPYISETFARILFLSNSLTFMMVYVWSKHNPFIHMSFLGLFTFTAAYLPWVLLGFSI 173
Query: 181 IVGSSPWVDLLGMLAGHAYYFLEDVYPLMTGRHFLKTPALSRPFF 315 +VGSS WVDLLGM+AGH YYFLEDVYP MTGR LKTP+ + F Sbjct: 174 LVGSSTWVDLLGMIAGHVYYFLEDVYPRMTGRRPLKTPSFIKALF 218
>tr|A3APU4|A3APU4_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_012816 PE=4 SV=1 Length = 269
Score = 174 bits (441), Expect = 2e-42 Identities = 82/105 (78%), Positives = 89/105 (84%) Frame = +1
Query: 1 GGMFQLVSESLARILFLSNSLTFMMVYVWSKRNPHVHMSFLGLFTFTAPYLPWVLLGFSI 180 GGM +SE+ ARILFLSNSLTFMMVYVWSK NP +HMSFLGLFTFTA YLPWVLLGFSI Sbjct: 114 GGMIPYISETFARILFLSNSLTFMMVYVWSKHNPFIHMSFLGLFTFTAAYLPWVLLGFSI 173
Query: 181 IVGSSPWVDLLGMLAGHAYYFLEDVYPLMTGRHFLKTPALSRPFF 315 +VGSS WVDLLGM+AGH YYFLEDVYP MTGR LKTP+ + F Sbjct: 174 LVGSSTWVDLLGMIAGHVYYFLEDVYPRMTGRRPLKTPSFIKALF 218
>tr|A2XP56|A2XP56_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_14361 PE=4 SV=1 Length = 249
Score = 174 bits (441), Expect = 2e-42 Identities = 82/105 (78%), Positives = 89/105 (84%) Frame = +1
Query: 1 GGMFQLVSESLARILFLSNSLTFMMVYVWSKRNPHVHMSFLGLFTFTAPYLPWVLLGFSI 180 GGM +SE+ ARILFLSNSLTFMMVYVWSK NP +HMSFLGLFTFTA YLPWVLLGFSI Sbjct: 114 GGMIPYISETFARILFLSNSLTFMMVYVWSKHNPFIHMSFLGLFTFTAAYLPWVLLGFSI 173
Query: 181 IVGSSPWVDLLGMLAGHAYYFLEDVYPLMTGRHFLKTPALSRPFF 315 +VGSS WVDLLGM+AGH YYFLEDVYP MTGR LKTP+ + F Sbjct: 174 LVGSSTWVDLLGMIAGHVYYFLEDVYPRMTGRRPLKTPSFIKALF 218
>tr|B6TKJ7|B6TKJ7_MAIZE Derlin-2 OS=Zea mays PE=2 SV=1 Length = 249
Score = 174 bits (440), Expect = 3e-42 Identities = 82/105 (78%), Positives = 89/105 (84%) Frame = +1
Query: 1 GGMFQLVSESLARILFLSNSLTFMMVYVWSKRNPHVHMSFLGLFTFTAPYLPWVLLGFSI 180 GGM +SE+ ARILFLSNSLTFMMVYVWSK NP +HMSFLGLFTFTA YLPWVLLGFSI Sbjct: 114 GGMIPYISETFARILFLSNSLTFMMVYVWSKHNPFIHMSFLGLFTFTAAYLPWVLLGFSI 173
Query: 181 IVGSSPWVDLLGMLAGHAYYFLEDVYPLMTGRHFLKTPALSRPFF 315 +VGSS WVDLLGM+AGH YYFLEDVYP MTGR LKTP+ + F Sbjct: 174 LVGSSTWVDLLGMIAGHMYYFLEDVYPRMTGRRPLKTPSFIKALF 218
>tr|B7FN17|B7FN17_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 244
Score = 173 bits (438), Expect = 5e-42 Identities = 80/105 (76%), Positives = 92/105 (87%) Frame = +1
Query: 1 GGMFQLVSESLARILFLSNSLTFMMVYVWSKRNPHVHMSFLGLFTFTAPYLPWVLLGFSI 180 GGM +SES A+I+FLSNSLTF+MVYVWSK+NP +HMSFLGLFTFTA YLPWVLLGFS+ Sbjct: 114 GGMIPYLSESFAKIIFLSNSLTFVMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSV 173
Query: 181 IVGSSPWVDLLGMLAGHAYYFLEDVYPLMTGRHFLKTPALSRPFF 315 +VG+S WVDLLGM+AGHAYYFLEDVYP MTGR LKTP+L + F Sbjct: 174 LVGASAWVDLLGMIAGHAYYFLEDVYPRMTGRRPLKTPSLIKALF 218
Score = 34.7 bits (78), Expect = 2.9 Identities = 17/27 (62%), Positives = 20/27 (74%) Frame = +3
Query: 282 LKDTCLVKALFPEDTVVVPRPANDRWA 362 LK L+KALF +D VVV RPAN R+A Sbjct: 208 LKTPSLIKALFADDPVVVARPANVRFA 234
>tr|A7R0M5|A7R0M5_VITVI Chromosome chr10 scaffold_312, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00011502001 PE=4 SV=1 Length = 247
Score = 172 bits (436), Expect = 9e-42 Identities = 80/105 (76%), Positives = 90/105 (85%) Frame = +1
Query: 1 GGMFQLVSESLARILFLSNSLTFMMVYVWSKRNPHVHMSFLGLFTFTAPYLPWVLLGFSI 180 GGM VSES A+I+FLSNSLTFMMVYVWSK+NP +HMSFLGLFTFTA YLPWVLLGFS+ Sbjct: 114 GGMIPYVSESFAKIIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSV 173
Query: 181 IVGSSPWVDLLGMLAGHAYYFLEDVYPLMTGRHFLKTPALSRPFF 315 +VG+S WVDLLGM+AGHAYYFLEDVYP MTGR L+TP + F Sbjct: 174 LVGASAWVDLLGMIAGHAYYFLEDVYPRMTGRRPLRTPQFIKAMF 218
>tr|A5AGW9|A5AGW9_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027642 PE=4 SV=1 Length = 238
Score = 172 bits (436), Expect = 9e-42 Identities = 80/105 (76%), Positives = 90/105 (85%) Frame = +1
Query: 1 GGMFQLVSESLARILFLSNSLTFMMVYVWSKRNPHVHMSFLGLFTFTAPYLPWVLLGFSI 180 GGM VSES A+I+FLSNSLTFMMVYVWSK+NP +HMSFLGLFTFTA YLPWVLLGFS+ Sbjct: 114 GGMIPYVSESFAKIIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSV 173
Query: 181 IVGSSPWVDLLGMLAGHAYYFLEDVYPLMTGRHFLKTPALSRPFF 315 +VG+S WVDLLGM+AGHAYYFLEDVYP MTGR L+TP + F Sbjct: 174 LVGASAWVDLLGMIAGHAYYFLEDVYPRMTGRRPLRTPQFIKAMF 218
>tr|A9TGM9|A9TGM9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_194907 PE=4 SV=1 Length = 243
Score = 172 bits (435), Expect = 1e-41 Identities = 82/105 (78%), Positives = 89/105 (84%) Frame = +1
Query: 1 GGMFQLVSESLARILFLSNSLTFMMVYVWSKRNPHVHMSFLGLFTFTAPYLPWVLLGFSI 180 GGM + A ILFLSNSLTFMMVYVWSKRNPHV MSFLGLF+FTAPYLPWVLLGFS+ Sbjct: 114 GGMLTFAAP-FADILFLSNSLTFMMVYVWSKRNPHVQMSFLGLFSFTAPYLPWVLLGFSV 172
Query: 181 IVGSSPWVDLLGMLAGHAYYFLEDVYPLMTGRHFLKTPALSRPFF 315 +VGSSPWVDLLGM AGHAY+FLEDVYPLMTGR LKTP + + F Sbjct: 173 MVGSSPWVDLLGMAAGHAYFFLEDVYPLMTGRRILKTPGIIKALF 217
Score = 35.0 bits (79), Expect = 2.2 Identities = 19/45 (42%), Positives = 24/45 (53%) Frame = +3
Query: 213 GHACGSCLLFLRRCISSHDWPPLLKDTCLVKALFPEDTVVVPRPA 347 G A G FL +LK ++KALFPE+TV+V RPA Sbjct: 184 GMAAGHAYFFLEDVYPLMTGRRILKTPGIIKALFPEETVMVARPA 228
>tr|A4S6T5|A4S6T5_OSTLU Predicted protein OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_27234 PE=4 SV=1 Length = 247
Score = 134 bits (336), Expect = 4e-30 Identities = 64/100 (64%), Positives = 71/100 (71%) Frame = +1
Query: 1 GGMFQLVSESLARILFLSNSLTFMMVYVWSKRNPHVHMSFLGLFTFTAPYLPWVLLGFSI 180 GG + FL SLTFMMVYVW +RN MSFLGLF FTAPYLPWVLL FS Sbjct: 103 GGTLLTAFAPFVNVQFLGTSLTFMMVYVWGRRNAATQMSFLGLFNFTAPYLPWVLLIFST 162
Query: 181 IVGSSPWVDLLGMLAGHAYYFLEDVYPLMTGRHFLKTPAL 300 ++GS P D LGM+AGHAYYFL+DVYP MTGR LKTPA+ Sbjct: 163 LIGSQPITDALGMIAGHAYYFLKDVYPEMTGREPLKTPAI 202
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