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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK946486
Clone id YMU02A01NGRL0012_M15
Library
Length 576
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0012_M15. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
TGCTTGTGATTGCGAGAAAGCAAACGAGAAGAGCGAGCAGTAGCTGCAATCGATCACCGC
GAGCTTGTGGCTATGGCGTCCGCGGTGTGCTCCTCTAGCAGCCTCGCAGCCGTGGCAGCT
TCCAGCGTGAGCAAGAGCTCCTTTGTGTCCGGACGGGCATTGCGAGCTGCGCCCGCAGCA
GCTACGTTTGCTCCATCAAAGAGGGCCGTCACCGTTTCGGCAGCAGCAGCCGACAGGCCT
TTGTGGTTCCCCGGCAGCACTCCTCCCGAACGGCTTGACGGAAGCCTACCTGGGGACTTT
GGTTTTGACCCCCTTGGTCTCGGATCCGAGCCTGAGCTCCTCAAGTGGTTTGTGCAATCA
GAGATAGTGCACTGCCGGTGGGCTATGTTGGGTGCTGCTGGAATATTCATTCCAGAGGCT
CTCACCAAAGCAGGAATCTTGAACACCCTATCATGGTACTCAGCTGGAGAGGCCGAGTAC
TTCACAGATACGACTACCCTCTTCGTTGTGGAGCTTATATTCTTGGGTTGGGCCGAGGGC
CGAAGATGGGCAGACATCATCACTCCCGGGATCAGT
■■Homology search results ■■ -
sp_hit_id P13869
Definition sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida
Align length 123
Score (bit) 213.0
E-value 7.0e-55
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946486|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0012_M15, 5'
         (562 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplas...   213   7e-55
sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloropl...   208   1e-53
sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloropl...   139   1e-32
sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloropla...   138   2e-32
sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chl...   112   1e-24
sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24, chloro...   109   1e-23
sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplas...   103   6e-22
sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloropl...   102   1e-21
sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A, c...   100   4e-21
sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B, c...    99   1e-20
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl...    94   6e-19
sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop...    89   1e-17
sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor...    75   2e-13
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...    73   1e-12
sp|Q9XF88|CB4B_ARATH Chlorophyll a-b binding protein CP29.2, chl...    72   1e-12
sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplas...    72   2e-12
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...    71   4e-12
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas...    70   5e-12
sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloropl...    70   5e-12
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...    70   7e-12
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop...    70   7e-12
sp|P22686|CB2_CHLMO Chlorophyll a-b binding protein of LHCII typ...    70   9e-12
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...    70   9e-12
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl...    69   1e-11
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop...    69   1e-11
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...    69   1e-11
sp|Q07473|CB4A_ARATH Chlorophyll a-b binding protein CP29.1, chl...    69   2e-11
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...    69   2e-11
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas...    69   2e-11
sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas...    69   2e-11

>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic
           OS=Petunia hybrida PE=2 SV=1
          Length = 270

 Score =  213 bits (541), Expect = 7e-55
 Identities = 100/123 (81%), Positives = 108/123 (87%), Gaps = 2/123 (1%)
 Frame = +2

Query: 194 VTVSAAAAD--RPLWFPGSTPPERLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRW 367
           V VSA AAD  RPLWFPGSTPPE LDGSLPGDFGFDPLGLGS+PE LKW  Q+E+VH RW
Sbjct: 54  VAVSAVAADPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRW 113

Query: 368 AMLGAAGIFIPEALTKAGILNTLSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADII 547
           AMLGAAGIFIPE LTK G+LNT SWY+AGE EYFTDTTTLFV+EL+ +GWAEGRRWADII
Sbjct: 114 AMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFTDTTTLFVIELVLIGWAEGRRWADII 173

Query: 548 TPG 556
            PG
Sbjct: 174 KPG 176



 Score = 34.3 bits (77), Expect = 0.43
 Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = +2

Query: 263 DGSLPGDFGFDPLGLGS-EPELLKWFVQSEIVHCRWAMLGAAGIFIPEALTKAGILNTL 436
           D   PG   FDPLG GS  P  +K     EI + R AML   G +     T  G ++ L
Sbjct: 193 DVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNL 251


>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7,
           chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1
          Length = 270

 Score =  208 bits (530), Expect = 1e-53
 Identities = 95/117 (81%), Positives = 103/117 (88%)
 Frame = +2

Query: 206 AAAADRPLWFPGSTPPERLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWAMLGAA 385
           AA  DRPLWFPGSTPP  LDGSLPGDFGFDPLGL S+PE L+W  Q+E+VHCRWAMLGAA
Sbjct: 60  AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAA 119

Query: 386 GIFIPEALTKAGILNTLSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITPG 556
           GIFIPE LTK GILNT SWY+AGE EYFTDTTTLF+VEL+ +GWAEGRRWADII PG
Sbjct: 120 GIFIPELLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPG 176



 Score = 34.3 bits (77), Expect = 0.43
 Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = +2

Query: 263 DGSLPGDFGFDPLGLGS-EPELLKWFVQSEIVHCRWAMLGAAGIFIPEALTKAGILNTL 436
           D   PG   FDPLG GS  P  +K     EI + R AML   G +     T  G ++ L
Sbjct: 193 DVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNL 251


>sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4,
           chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1
          Length = 251

 Score =  139 bits (349), Expect = 1e-32
 Identities = 62/109 (56%), Positives = 76/109 (69%)
 Frame = +2

Query: 230 WFPGSTPPERLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWAMLGAAGIFIPEAL 409
           W PG   P+ L GSL GD GFDPLGL  +PE LKWFVQ+E+V+ RWAMLG AG+ +PE  
Sbjct: 57  WLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVF 116

Query: 410 TKAGILNTLSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITPG 556
           TK GI+N   WY AG+ +YF  ++TLFV+E I   + E RRW DI  PG
Sbjct: 117 TKIGIINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPG 165


>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4,
           chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1
          Length = 252

 Score =  138 bits (347), Expect = 2e-32
 Identities = 62/109 (56%), Positives = 76/109 (69%)
 Frame = +2

Query: 230 WFPGSTPPERLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWAMLGAAGIFIPEAL 409
           W PG   P  L GSLPGD GFDPLGL  +PE L+WFVQ+E+V+ RWAMLG AG+ +PE  
Sbjct: 56  WLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVF 115

Query: 410 TKAGILNTLSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITPG 556
           T  GI+N   WY+AG+ EYF  ++TLFV+E I   + E RRW DI  PG
Sbjct: 116 TSIGIINVPKWYAAGKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPG 164


>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20,
           chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20
           PE=1 SV=1
          Length = 231

 Score =  112 bits (281), Expect = 1e-24
 Identities = 56/110 (50%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
 Frame = +2

Query: 230 WFPGSTPPERLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWAMLGAAGIFIPEAL 409
           W PG   P  LDGSL GD GFDPL L  +PE L+WFVQ+++V+ RWAMLG AG+ IPE L
Sbjct: 36  WLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFVQADVVNGRWAMLGVAGMLIPEVL 95

Query: 410 TKAGILNTLSWYS-AGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITPG 556
           TKAG++N   W    G+  YF  ++T   V +    + E RRW DI  PG
Sbjct: 96  TKAGLMNAPEWLRLPGKETYFASSSTALRVHMSST-YVEIRRWQDIKNPG 144


>sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24,
           chloroplastic OS=Spinacia oleracea PE=2 SV=1
          Length = 261

 Score =  109 bits (272), Expect = 1e-23
 Identities = 57/129 (44%), Positives = 73/129 (56%), Gaps = 9/129 (6%)
 Frame = +2

Query: 194 VTVSAAAADRPLWFPGST------PPERLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIV 355
           V V+AAAA +  W P          PE LDGSLPGDFGFDPLGLG +P  LKW+ ++E++
Sbjct: 48  VVVAAAAAPKKSWIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 107

Query: 356 HCRWAMLGAAGIFIPEALTKAGILNTLSWYSAGE---AEYFTDTTTLFVVELIFLGWAEG 526
           H RWAML   GIF+ +A T       + W+ AG    A       TL   +L+ +GW E 
Sbjct: 108 HGRWAMLAVLGIFVGQAWT------GIPWFEAGADPGAVAPFSFGTLLGTQLLLMGWVES 161

Query: 527 RRWADIITP 553
           +RW D   P
Sbjct: 162 KRWVDFFDP 170


>sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplastic
           OS=Pisum sativum GN=lhca3 PE=1 SV=1
          Length = 275

 Score =  103 bits (257), Expect = 6e-22
 Identities = 58/134 (43%), Positives = 75/134 (55%), Gaps = 15/134 (11%)
 Frame = +2

Query: 200 VSAAAADRPLWFPGSTPPERLDGSLPGDFGFDPLGLGSEPELL------KWFVQSEIVHC 361
           V     DRPLWF        LDGSLPGD+GFDPLGL S+PE        +W    E+++ 
Sbjct: 48  VKQGGVDRPLWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPRWLAYGEVING 106

Query: 362 RWAMLGAAGIFIPEALTKAGIL---NTLSWYS------AGEAEYFTDTTTLFVVELIFLG 514
           R+AMLGA G   PE L K G++     L+W+       AG   Y+ D  TLFV+E+  +G
Sbjct: 107 RFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMG 166

Query: 515 WAEGRRWADIITPG 556
           +AE RR+ D   PG
Sbjct: 167 FAEHRRFQDWAKPG 180



 Score = 34.3 bits (77), Expect = 0.43
 Identities = 23/63 (36%), Positives = 30/63 (47%)
 Frame = +2

Query: 233 FPGSTPPERLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWAMLGAAGIFIPEALT 412
           F GS  P     + PG   F+PLG G + + LK     E+ + R AML   G FI   +T
Sbjct: 194 FGGSGNP-----AYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVT 248

Query: 413 KAG 421
             G
Sbjct: 249 GVG 251


>sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8,
           chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1
          Length = 273

 Score =  102 bits (255), Expect = 1e-21
 Identities = 59/129 (45%), Positives = 75/129 (58%), Gaps = 15/129 (11%)
 Frame = +2

Query: 215 ADRPLWFPGSTPPERLDGSLPGDFGFDPLGLGSEPELL------KWFVQSEIVHCRWAML 376
           A+R LWF        LDG LPGDFGFDPLGL S+PE        KW    E+++ R+AML
Sbjct: 51  ANRQLWFASKQSLSYLDGRLPGDFGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRFAML 109

Query: 377 GAAGIFIPEALTKAGIL---NTLSWYS------AGEAEYFTDTTTLFVVELIFLGWAEGR 529
           GAAG   PE L KAG++     L+W+       AG   Y+ D  TLFV+E+  +G+AE R
Sbjct: 110 GAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHR 169

Query: 530 RWADIITPG 556
           R+ D   PG
Sbjct: 170 RFQDWAKPG 178



 Score = 35.0 bits (79), Expect = 0.25
 Identities = 20/53 (37%), Positives = 27/53 (50%)
 Frame = +2

Query: 263 DGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWAMLGAAGIFIPEALTKAG 421
           D + PG   F+PLG G + + +K     EI + R AML   G FI   +T  G
Sbjct: 197 DPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQALVTGVG 249


>sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A,
           chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3
           SV=1
          Length = 256

 Score =  100 bits (250), Expect = 4e-21
 Identities = 55/128 (42%), Positives = 71/128 (55%), Gaps = 9/128 (7%)
 Frame = +2

Query: 197 TVSAAAADRPLWFPGS------TPPERLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVH 358
           TV AAAA +  W P          PE LDGSLPGD+GFDPLGLG +P  LKW+ ++E++H
Sbjct: 45  TVLAAAAKKS-WIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIH 103

Query: 359 CRWAMLGAAGIFIPEALTKAGILNTLSWYSAGE---AEYFTDTTTLFVVELIFLGWAEGR 529
            RWAM    GIF+ +A       + + W+ AG    A       TL   +LI +GW E +
Sbjct: 104 GRWAMAAVLGIFVGQA------WSGIPWFEAGADPGAIAPFSFGTLLGTQLILMGWVESK 157

Query: 530 RWADIITP 553
           RW D   P
Sbjct: 158 RWVDFFDP 165


>sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B,
           chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3
           SV=1
          Length = 256

 Score = 99.0 bits (245), Expect = 1e-20
 Identities = 51/125 (40%), Positives = 69/125 (55%), Gaps = 9/125 (7%)
 Frame = +2

Query: 194 VTVSAAAADRPLWFPGS------TPPERLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIV 355
           V  +AA A +  W P          PE LDGSLPGDFGFDPLGLG +P  LKW+ ++E++
Sbjct: 43  VVAAAAVAPKKSWIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 102

Query: 356 HCRWAMLGAAGIFIPEALTKAGILNTLSWYSAGE---AEYFTDTTTLFVVELIFLGWAEG 526
           H RWAM    GIF+ +A       + + W+ AG    A       +L   +L+ +GW E 
Sbjct: 103 HGRWAMAAVLGIFVGQA------WSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVES 156

Query: 527 RRWAD 541
           +RW D
Sbjct: 157 KRWVD 161
tr_hit_id A7QP61
Definition tr|A7QP61|A7QP61_VITVI Chromosome chr1 scaffold_136, whole genome shotgun sequence OS=Vitis vinifera
Align length 122
Score (bit) 221.0
E-value 2.0e-56
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946486|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0012_M15, 5'
         (562 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7QP61|A7QP61_VITVI Chromosome chr1 scaffold_136, whole genom...   221   2e-56
tr|A5B4F0|A5B4F0_VITVI Putative uncharacterized protein OS=Vitis...   221   2e-56
tr|A9PGU8|A9PGU8_POPTR Putative uncharacterized protein OS=Popul...   216   9e-55
tr|Q8RU80|Q8RU80_PINSY LHC I type II chlorophyll binding protein...   214   3e-54
tr|Q6ZL95|Q6ZL95_ORYSJ Os07g0577600 protein OS=Oryza sativa subs...   214   3e-54
tr|B8B7R8|B8B7R8_ORYSI Putative uncharacterized protein OS=Oryza...   214   3e-54
tr|A9PGU3|A9PGU3_POPTR Putative uncharacterized protein OS=Popul...   214   3e-54
tr|A2YMZ1|A2YMZ1_ORYSI Putative uncharacterized protein OS=Oryza...   214   3e-54
tr|Q40252|Q40252_LOLTE Type II LHCI OS=Lolium temulentum GN=lhaB...   213   6e-54
tr|Q43485|Q43485_HORVU LHCI-680, photosystem I antenna protein O...   212   1e-53
tr|Q02070|Q02070_PINSY Type II chlorophyll a /b-binding protein ...   212   1e-53
tr|Q9SYW8|Q9SYW8_ARATH Lhca2 protein OS=Arabidopsis thaliana GN=...   211   2e-53
tr|Q9M320|Q9M320_ARATH Lhca2 protein OS=Arabidopsis thaliana GN=...   211   2e-53
tr|B6SMV5|B6SMV5_MAIZE Chlorophyll a-b binding protein OS=Zea ma...   211   2e-53
tr|Q8VXA6|Q8VXA6_PICAB Putative chlorophyll A-B binding protein ...   211   2e-53
tr|A9NKX1|A9NKX1_PICSI Putative uncharacterized protein OS=Picea...   211   2e-53
tr|A4URF4|A4URF4_BRAJU LhCa2 protein OS=Brassica juncea PE=2 SV=2     210   4e-53
tr|Q41038|Q41038_PEA Type II chlorophyll a/b binding protein fro...   210   5e-53
tr|B6SJV3|B6SJV3_MAIZE Chlorophyll a-b binding protein OS=Zea ma...   210   5e-53
tr|A9TJ06|A9TJ06_PHYPA Predicted protein OS=Physcomitrella paten...   210   5e-53
tr|O22383|O22383_ORYSA Photosystem I antenna protein OS=Oryza sa...   208   1e-52
tr|B4YYB1|B4YYB1_THEHA ST49-6 (Fragment) OS=Thellungiella haloph...   207   2e-52
tr|B6T892|B6T892_MAIZE Chlorophyll a-b binding protein OS=Zea ma...   207   4e-52
tr|A9TV00|A9TV00_PHYPA Predicted protein (Fragment) OS=Physcomit...   205   2e-51
tr|B6TKL9|B6TKL9_MAIZE Chlorophyll a-b binding protein OS=Zea ma...   204   3e-51
tr|A9U5E4|A9U5E4_PHYPA Predicted protein OS=Physcomitrella paten...   201   2e-50
tr|Q9LMB1|Q9LMB1_ARATH T29M8.2 protein OS=Arabidopsis thaliana G...   184   3e-45
tr|Q8LCQ4|Q8LCQ4_ARATH PSI type II chlorophyll a/b-binding prote...   184   3e-45
tr|Q84WT1|Q84WT1_ARATH Putative light-harvesting chlorophyll a/b...   184   3e-45
tr|A7PDT5|A7PDT5_VITVI Chromosome chr11 scaffold_13, whole genom...   184   4e-45

>tr|A7QP61|A7QP61_VITVI Chromosome chr1 scaffold_136, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00002813001
           PE=4 SV=1
          Length = 270

 Score =  221 bits (563), Expect = 2e-56
 Identities = 105/122 (86%), Positives = 110/122 (90%), Gaps = 2/122 (1%)
 Frame = +2

Query: 197 TVSAAAAD--RPLWFPGSTPPERLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWA 370
           TVSAAAAD  RPLWFPGSTPP  LDGSLPGDFGFDPLGLGS+PE LKW VQSEIVHCRWA
Sbjct: 55  TVSAAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPETLKWMVQSEIVHCRWA 114

Query: 371 MLGAAGIFIPEALTKAGILNTLSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIIT 550
           MLGAAGIFIPE LTK GILNT SWY+AGE EYFTD TTLF+VE+IF+GWAEGRRWADII 
Sbjct: 115 MLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDKTTLFIVEMIFIGWAEGRRWADIIK 174

Query: 551 PG 556
           PG
Sbjct: 175 PG 176



 Score = 35.4 bits (80), Expect = 2.2
 Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
 Frame = +2

Query: 263 DGSLPGDFGFDPLGLGS-EPELLKWFVQSEIVHCRWAMLGAAGIFIPEALTKAGILNTLS 439
           D   PG   FDPLG GS  P+ +K     EI + R AML   G +     T  G ++ L 
Sbjct: 193 DVGYPGGLWFDPLGWGSGSPDKIKELRTKEIKNGRLAMLAVMGAWFQAIYTGTGPIDNLF 252

Query: 440 WYSA--GEAEYFTDTT 481
            + A  G A  F   T
Sbjct: 253 AHLADPGHATIFAAFT 268


>tr|A5B4F0|A5B4F0_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_033663 PE=4 SV=1
          Length = 272

 Score =  221 bits (563), Expect = 2e-56
 Identities = 105/122 (86%), Positives = 110/122 (90%), Gaps = 2/122 (1%)
 Frame = +2

Query: 197 TVSAAAAD--RPLWFPGSTPPERLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWA 370
           TVSAAAAD  RPLWFPGSTPP  LDGSLPGDFGFDPLGLGS+PE LKW VQSEIVHCRWA
Sbjct: 57  TVSAAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPETLKWMVQSEIVHCRWA 116

Query: 371 MLGAAGIFIPEALTKAGILNTLSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIIT 550
           MLGAAGIFIPE LTK GILNT SWY+AGE EYFTD TTLF+VE+IF+GWAEGRRWADII 
Sbjct: 117 MLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDKTTLFIVEMIFIGWAEGRRWADIIK 176

Query: 551 PG 556
           PG
Sbjct: 177 PG 178



 Score = 35.4 bits (80), Expect = 2.2
 Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
 Frame = +2

Query: 263 DGSLPGDFGFDPLGLGS-EPELLKWFVQSEIVHCRWAMLGAAGIFIPEALTKAGILNTLS 439
           D   PG   FDPLG GS  P+ +K     EI + R AML   G +     T  G ++ L 
Sbjct: 195 DVGYPGGLWFDPLGWGSGSPDKIKELRTKEIKNGRLAMLAVMGAWFQAIYTGTGPIDNLF 254

Query: 440 WYSA--GEAEYFTDTT 481
            + A  G A  F   T
Sbjct: 255 AHLADPGHATIFAAFT 270


>tr|A9PGU8|A9PGU8_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 269

 Score =  216 bits (549), Expect = 9e-55
 Identities = 101/122 (82%), Positives = 108/122 (88%), Gaps = 1/122 (0%)
 Frame = +2

Query: 194 VTVSAAA-ADRPLWFPGSTPPERLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWA 370
           VTV  AA  DRPLWFPGSTPP  LDGSLPGDFGFDPLGLGS+PE L+W VQ+E+VHCRWA
Sbjct: 54  VTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPETLRWNVQAELVHCRWA 113

Query: 371 MLGAAGIFIPEALTKAGILNTLSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIIT 550
           MLGAAGIFIPE LTK GILNT SWYSAGE EYFTDTTTLF+VEL F+GWAEGRRWADI+ 
Sbjct: 114 MLGAAGIFIPEFLTKIGILNTPSWYSAGEVEYFTDTTTLFIVELFFIGWAEGRRWADILK 173

Query: 551 PG 556
           PG
Sbjct: 174 PG 175



 Score = 37.0 bits (84), Expect = 0.74
 Identities = 28/76 (36%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
 Frame = +2

Query: 263 DGSLPGDFGFDPLGLGS-EPELLKWFVQSEIVHCRWAMLGAAGIFIPEALTKAGILNTLS 439
           D   PG   FDPLG GS  PE +K     EI + R AML   G +     T  G ++ L 
Sbjct: 192 DVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLF 251

Query: 440 WYSA--GEAEYFTDTT 481
            + A  G A  F   T
Sbjct: 252 AHLADPGHATVFAAFT 267


>tr|Q8RU80|Q8RU80_PINSY LHC I type II chlorophyll binding protein
           (Fragment) OS=Pinus sylvestris GN=LHCA2 PE=4 SV=1
          Length = 137

 Score =  214 bits (545), Expect = 3e-54
 Identities = 100/122 (81%), Positives = 108/122 (88%), Gaps = 1/122 (0%)
 Frame = +2

Query: 194 VTVSAAA-ADRPLWFPGSTPPERLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWA 370
           VTVS A   +RPLWFPG+TPP  LDGSLPGDFGFDPLGLGS+PE LKW VQ+E+VHCRWA
Sbjct: 10  VTVSQAVQTERPLWFPGNTPPPWLDGSLPGDFGFDPLGLGSDPETLKWMVQAELVHCRWA 69

Query: 371 MLGAAGIFIPEALTKAGILNTLSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIIT 550
           MLGAAGIFIPE LTK GILNT SWY+AGE EYFTD TTLFVVE+IFLGWAEGRRWADI+ 
Sbjct: 70  MLGAAGIFIPELLTKLGILNTPSWYTAGELEYFTDKTTLFVVEMIFLGWAEGRRWADILK 129

Query: 551 PG 556
           PG
Sbjct: 130 PG 131


>tr|Q6ZL95|Q6ZL95_ORYSJ Os07g0577600 protein OS=Oryza sativa subsp.
           japonica GN=OJ1065_B06.19-1 PE=2 SV=1
          Length = 263

 Score =  214 bits (545), Expect = 3e-54
 Identities = 97/119 (81%), Positives = 107/119 (89%)
 Frame = +2

Query: 200 VSAAAADRPLWFPGSTPPERLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWAMLG 379
           V AAA DRP+WFPGSTPP  LDGSLPGDFGFDPLGLGS+PE L+W VQ+E+VHCRWAMLG
Sbjct: 51  VRAAAPDRPIWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLG 110

Query: 380 AAGIFIPEALTKAGILNTLSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITPG 556
           AAGIFIPE LTK GILNT SWY+AGE +YFTDTTTLF++ELI +GWAEGRRWADII PG
Sbjct: 111 AAGIFIPEFLTKIGILNTPSWYTAGEQQYFTDTTTLFIIELILIGWAEGRRWADIIKPG 169



 Score = 35.0 bits (79), Expect = 2.8
 Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +2

Query: 263 DGSLPGDFGFDPLGLGS-EPELLKWFVQSEIVHCRWAMLGAAGIFIPEALTKAGILNTL 436
           D   PG   FDPLG G+  PE +K     EI + R AML   G +     T  G ++ L
Sbjct: 186 DVGYPGGLWFDPLGWGTGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNL 244


>tr|B8B7R8|B8B7R8_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_26601 PE=4 SV=1
          Length = 432

 Score =  214 bits (545), Expect = 3e-54
 Identities = 97/119 (81%), Positives = 107/119 (89%)
 Frame = +2

Query: 200 VSAAAADRPLWFPGSTPPERLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWAMLG 379
           V AAA DRP+WFPGSTPP  LDGSLPGDFGFDPLGLGS+PE L+W VQ+E+VHCRWAMLG
Sbjct: 51  VRAAAPDRPIWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLG 110

Query: 380 AAGIFIPEALTKAGILNTLSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITPG 556
           AAGIFIPE LTK GILNT SWY+AGE +YFTDTTTLF++ELI +GWAEGRRWADII PG
Sbjct: 111 AAGIFIPEFLTKIGILNTPSWYTAGEQQYFTDTTTLFIIELILIGWAEGRRWADIIKPG 169


>tr|A9PGU3|A9PGU3_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 269

 Score =  214 bits (545), Expect = 3e-54
 Identities = 100/122 (81%), Positives = 108/122 (88%), Gaps = 1/122 (0%)
 Frame = +2

Query: 194 VTVSAAA-ADRPLWFPGSTPPERLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWA 370
           VTV  AA  DRPLWFPGSTPP  LDGSLPGDFGFDPLGLGS+PE L+W VQ+E+VHCRWA
Sbjct: 54  VTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPETLRWNVQAELVHCRWA 113

Query: 371 MLGAAGIFIPEALTKAGILNTLSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIIT 550
           MLGAAGIFIPE LTK GILNT SWY+AGE EYFTDTTTLF+VEL F+GWAEGRRWADI+ 
Sbjct: 114 MLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELFFIGWAEGRRWADILK 173

Query: 551 PG 556
           PG
Sbjct: 174 PG 175



 Score = 37.4 bits (85), Expect = 0.57
 Identities = 28/76 (36%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
 Frame = +2

Query: 263 DGSLPGDFGFDPLGLGS-EPELLKWFVQSEIVHCRWAMLGAAGIFIPEALTKAGILNTLS 439
           D   PG   FDPLG GS  PE +K     EI + R AML   G +     T  G ++ L 
Sbjct: 192 DVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLF 251

Query: 440 WYSA--GEAEYFTDTT 481
            + A  G A  F+  T
Sbjct: 252 AHLADPGHATVFSAFT 267


>tr|A2YMZ1|A2YMZ1_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_26600 PE=4 SV=1
          Length = 263

 Score =  214 bits (545), Expect = 3e-54
 Identities = 97/119 (81%), Positives = 107/119 (89%)
 Frame = +2

Query: 200 VSAAAADRPLWFPGSTPPERLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWAMLG 379
           V AAA DRP+WFPGSTPP  LDGSLPGDFGFDPLGLGS+PE L+W VQ+E+VHCRWAMLG
Sbjct: 51  VRAAAPDRPIWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLG 110

Query: 380 AAGIFIPEALTKAGILNTLSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITPG 556
           AAGIFIPE LTK GILNT SWY+AGE +YFTDTTTLF++ELI +GWAEGRRWADII PG
Sbjct: 111 AAGIFIPEFLTKIGILNTPSWYTAGEQQYFTDTTTLFIIELILIGWAEGRRWADIIKPG 169



 Score = 35.0 bits (79), Expect = 2.8
 Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +2

Query: 263 DGSLPGDFGFDPLGLGS-EPELLKWFVQSEIVHCRWAMLGAAGIFIPEALTKAGILNTL 436
           D   PG   FDPLG G+  PE +K     EI + R AML   G +     T  G ++ L
Sbjct: 186 DVGYPGGLWFDPLGWGTGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNL 244


>tr|Q40252|Q40252_LOLTE Type II LHCI OS=Lolium temulentum GN=lhaB
           PE=2 SV=1
          Length = 253

 Score =  213 bits (542), Expect = 6e-54
 Identities = 98/120 (81%), Positives = 106/120 (88%)
 Frame = +2

Query: 197 TVSAAAADRPLWFPGSTPPERLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWAML 376
           TV  AA +RP+WFPGSTPP  LDGSLPGDFGFDP GLGS+PE L+W VQ+E+VHCRWAML
Sbjct: 40  TVRTAAPERPIWFPGSTPPPWLDGSLPGDFGFDPWGLGSDPESLRWNVQAELVHCRWAML 99

Query: 377 GAAGIFIPEALTKAGILNTLSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITPG 556
           GAAGIFIPE LTK GILNT SWY+AGE EYFTDTTTLFVVELI +GWAEGRRWADII PG
Sbjct: 100 GAAGIFIPELLTKIGILNTPSWYTAGEQEYFTDTTTLFVVELILIGWAEGRRWADIIKPG 159



 Score = 36.2 bits (82), Expect = 1.3
 Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +2

Query: 263 DGSLPGDFGFDPLGLGS-EPELLKWFVQSEIVHCRWAMLGAAGIFIPEALTKAGILNTL 436
           D   PG   FDPLG G+  PE LK     EI + R AML   G +     T  G ++ L
Sbjct: 176 DVGYPGGLWFDPLGYGNGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNL 234


>tr|Q43485|Q43485_HORVU LHCI-680, photosystem I antenna protein
           OS=Hordeum vulgare GN=Lhca2 PE=2 SV=1
          Length = 255

 Score =  212 bits (540), Expect = 1e-53
 Identities = 97/119 (81%), Positives = 106/119 (89%)
 Frame = +2

Query: 200 VSAAAADRPLWFPGSTPPERLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWAMLG 379
           V AAA +RP+WFPGSTPP  LDGSLPGDFGFDP GLGS+PE L+W VQ+E+VHCRWAMLG
Sbjct: 43  VRAAAPERPIWFPGSTPPPWLDGSLPGDFGFDPWGLGSDPESLRWNVQAELVHCRWAMLG 102

Query: 380 AAGIFIPEALTKAGILNTLSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITPG 556
           AAGIFIPE LTK GILNT SWY+AGE EYFTDTTTLF+VELI +GWAEGRRWADII PG
Sbjct: 103 AAGIFIPELLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELILIGWAEGRRWADIIKPG 161



 Score = 36.2 bits (82), Expect = 1.3
 Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +2

Query: 263 DGSLPGDFGFDPLGLGS-EPELLKWFVQSEIVHCRWAMLGAAGIFIPEALTKAGILNTL 436
           D   PG   FDPLG G+  PE LK     EI + R AML   G +     T  G ++ L
Sbjct: 178 DVGYPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNL 236