DK946487 |
Clone id |
YMU02A01NGRL0012_M16 |
Library |
YMU02 |
Length |
393 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0012_M16. 5' end sequence. |
Accession |
DK946487 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL203Contig1 |
Sequence |
TCTGTGAAAGATCTTGTGCTGCTCCTGTTTGAAACTGCTTTGCTAACCTCTGGTTTCAGC CTGGATGATCCTAACACCTTTGGTAACAGAATCCACAGAATGCTCAAGCTTGGGCTCAGC ATTGATGATGAGGCAGGCCCTTCTGCTGAGGCTGATGAGGATATGGATGCTGCTGGTGCT GAAGCAGATGCCGAGGGCAGCAAGATGGAAGAGGTGGACTAAGTACAACTGAATGCAGGG GTAGAGTGTCGTCTTGGTCGCAGGTGCTTAAGCACTCTTCAAAATTATTGGAACACTTGG GCTTTTAGCTTCCCATGTAATTTTTGATTTAATTTCTACGGACATGAATTAAATTGTGTA TTTACAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P36181 |
Definition |
sp|P36181|HSP80_SOLLC Heat shock cognate protein 80 OS=Solanum lycopersicum |
Align length |
73 |
Score (bit) |
66.2 |
E-value |
5.0e-11 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q8GT83 |
Definition |
tr|Q8GT83|Q8GT83_GOSBA Fiber protein Fb9 (Fragment) OS=Gossypium barbadense |
Align length |
73 |
Score (bit) |
69.3 |
E-value |
9.0e-11 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK946487|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0012_M16, 5' (365 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q8GT83|Q8GT83_GOSBA Fiber protein Fb9 (Fragment) OS=Gossypium... 69 9e-11 tr|B6EBD6|B6EBD6_SOYBN Heat shock protein 90-2 OS=Glycine max PE... 69 9e-11 tr|Q9M5X2|Q9M5X2_EUPES Heat-shock protein 80 (Fragment) OS=Eupho... 69 1e-10 tr|Q922F6|Q922F6_MOUSE Putative uncharacterized protein (Fragmen... 68 3e-10 tr|A8WEL7|A8WEL7_9MAGN Heat shock protein 90 OS=Vitis pseudoreti... 67 4e-10 tr|A7Q9E0|A7Q9E0_VITVI Chromosome chr19 scaffold_66, whole genom... 67 4e-10 tr|Q6UJX6|Q6UJX6_NICBE Molecular chaperone Hsp90-1 OS=Nicotiana ... 67 6e-10 tr|Q6R0J1|Q6R0J1_TOBAC Heat shock protein 90 OS=Nicotiana tabacu... 67 6e-10 tr|Q14TB1|Q14TB1_TOBAC Heat shock protein 90 OS=Nicotiana tabacu... 67 6e-10 tr|Q6UJX5|Q6UJX5_NICBE Molecular chaperone Hsp90-2 OS=Nicotiana ... 66 8e-10 tr|Q6UJX4|Q6UJX4_SOLLC Molecular chaperone Hsp90-1 OS=Solanum ly... 66 8e-10 tr|Q53Z32|Q53Z32_SOLLC Molecular chaperone Hsp90-2 OS=Solanum ly... 66 8e-10 tr|A9PGU4|A9PGU4_POPTR Putative uncharacterized protein OS=Popul... 66 8e-10 tr|B1Q477|B1Q477_CAPCH Putative Hsp90-2 OS=Capsicum chinense PE=... 66 1e-09 tr|B6EBD7|B6EBD7_SOYBN Heat shock protein 90-1 OS=Glycine max PE... 65 2e-09 tr|Q8H158|Q8H158_ARATH Putative heat shock protein 81-2 (HSP81-2... 65 2e-09 tr|A9TQU1|A9TQU1_PHYPA Predicted protein OS=Physcomitrella paten... 65 2e-09 tr|A9SIS2|A9SIS2_PHYPA Predicted protein OS=Physcomitrella paten... 65 2e-09 tr|Q769C7|Q769C7_NICBE Heat shock protein 90 (Fragment) OS=Nicot... 64 3e-09 tr|A9NMS8|A9NMS8_PICSI Putative uncharacterized protein OS=Picea... 64 3e-09 tr|A9QVI8|A9QVI8_9ASTR Heat shock protein 90 OS=Ageratina adenop... 64 4e-09 tr|A7R4C2|A7R4C2_VITVI Chromosome undetermined scaffold_648, who... 64 5e-09 tr|A7QNJ3|A7QNJ3_VITVI Chromosome chr2 scaffold_132, whole genom... 64 5e-09 tr|A5C4Z0|A5C4Z0_VITVI Putative uncharacterized protein OS=Vitis... 64 5e-09 tr|A5AHA8|A5AHA8_VITVI Putative uncharacterized protein OS=Vitis... 64 5e-09 tr|A9TFM2|A9TFM2_PHYPA Predicted protein OS=Physcomitrella paten... 63 6e-09 tr|A9TFL9|A9TFL9_PHYPA Predicted protein OS=Physcomitrella paten... 63 6e-09 tr|Q0WLP0|Q0WLP0_ARATH HEAT SHOCK PROTEIN 81-2 (Fragment) OS=Ara... 63 8e-09 tr|A9TLH3|A9TLH3_PHYPA Predicted protein OS=Physcomitrella paten... 63 8e-09 tr|A8IXR4|A8IXR4_BRACM Heat shock protein 81-4 OS=Brassica campe... 63 8e-09
>tr|Q8GT83|Q8GT83_GOSBA Fiber protein Fb9 (Fragment) OS=Gossypium barbadense PE=2 SV=1 Length = 176
Score = 69.3 bits (168), Expect = 9e-11 Identities = 40/73 (54%), Positives = 43/73 (58%) Frame = +1
Query: 1 SVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIDDEAGPSXXXXXXXXXXXX 180 SVKD TSGFSLDDPNTFGNRIHRMLKLGLSID++AG + Sbjct: 106 SVKDLVLLLFETALLTSGFSLDDPNTFGNRIHRMLKLGLSIDEDAGEA--EADADMPPLE 163
Query: 181 XXXXXXSKMEEVD 219 SKMEEVD Sbjct: 164 DADAEGSKMEEVD 176
>tr|B6EBD6|B6EBD6_SOYBN Heat shock protein 90-2 OS=Glycine max PE=2 SV=1 Length = 700
Score = 69.3 bits (168), Expect = 9e-11 Identities = 40/73 (54%), Positives = 43/73 (58%) Frame = +1
Query: 1 SVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIDDEAGPSXXXXXXXXXXXX 180 SVKD TSGFSLDDPNTFGNRIHRMLKLGLSID++AG + Sbjct: 630 SVKDLVLLLFETALLTSGFSLDDPNTFGNRIHRMLKLGLSIDEDAGEA--DADMPPLEDA 687
Query: 181 XXXXXXSKMEEVD 219 SKMEEVD Sbjct: 688 DADAEGSKMEEVD 700
>tr|Q9M5X2|Q9M5X2_EUPES Heat-shock protein 80 (Fragment) OS=Euphorbia esula PE=2 SV=1 Length = 320
Score = 68.9 bits (167), Expect = 1e-10 Identities = 40/73 (54%), Positives = 42/73 (57%) Frame = +1
Query: 1 SVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIDDEAGPSXXXXXXXXXXXX 180 SVKD TSGFSLDDPNTFGNRIHRMLKLGLSID++AG Sbjct: 250 SVKDLVLLLFETALLTSGFSLDDPNTFGNRIHRMLKLGLSIDEDAGEG--DADMPALEEA 307
Query: 181 XXXXXXSKMEEVD 219 SKMEEVD Sbjct: 308 DADAEGSKMEEVD 320
>tr|Q922F6|Q922F6_MOUSE Putative uncharacterized protein (Fragment) OS=Mus musculus PE=2 SV=1 Length = 491
Score = 67.8 bits (164), Expect = 3e-10 Identities = 40/73 (54%), Positives = 41/73 (56%) Frame = +1
Query: 1 SVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIDDEAGPSXXXXXXXXXXXX 180 SVKD TSGFSLDDPNTFGNRIHRMLKLGLSIDD+A Sbjct: 422 SVKDLVLLLHETALLTSGFSLDDPNTFGNRIHRMLKLGLSIDDDAA---GEVDVDMPALE 478
Query: 181 XXXXXXSKMEEVD 219 SKMEEVD Sbjct: 479 EADAEESKMEEVD 491
>tr|A8WEL7|A8WEL7_9MAGN Heat shock protein 90 OS=Vitis pseudoreticulata PE=2 SV=1 Length = 699
Score = 67.0 bits (162), Expect = 4e-10 Identities = 39/73 (53%), Positives = 42/73 (57%) Frame = +1
Query: 1 SVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIDDEAGPSXXXXXXXXXXXX 180 SVKD TSGFSLD+PNTFGNRIHRMLKLGL+ID+EAG Sbjct: 629 SVKDLVLLLFETSLLTSGFSLDEPNTFGNRIHRMLKLGLNIDEEAG--DVDVDMPPLEEA 686
Query: 181 XXXXXXSKMEEVD 219 SKMEEVD Sbjct: 687 DAEAEGSKMEEVD 699
>tr|A7Q9E0|A7Q9E0_VITVI Chromosome chr19 scaffold_66, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00033436001 PE=4 SV=1 Length = 431
Score = 67.0 bits (162), Expect = 4e-10 Identities = 39/73 (53%), Positives = 42/73 (57%) Frame = +1
Query: 1 SVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIDDEAGPSXXXXXXXXXXXX 180 SVKD TSGFSLD+PNTFGNRIHRMLKLGL+ID+EAG Sbjct: 361 SVKDLVLLLFETSLLTSGFSLDEPNTFGNRIHRMLKLGLNIDEEAG--DVDVDMPPLEEA 418
Query: 181 XXXXXXSKMEEVD 219 SKMEEVD Sbjct: 419 DAEAEGSKMEEVD 431
>tr|Q6UJX6|Q6UJX6_NICBE Molecular chaperone Hsp90-1 OS=Nicotiana benthamiana PE=2 SV=1 Length = 699
Score = 66.6 bits (161), Expect = 6e-10 Identities = 38/73 (52%), Positives = 43/73 (58%) Frame = +1
Query: 1 SVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIDDEAGPSXXXXXXXXXXXX 180 SVKD TSGFSL++PNTFGNRIHRMLKLGLSIDD++G + Sbjct: 629 SVKDLVLLLFETALLTSGFSLEEPNTFGNRIHRMLKLGLSIDDDSGDA--DVDMPALEDA 686
Query: 181 XXXXXXSKMEEVD 219 SKMEEVD Sbjct: 687 EADAEGSKMEEVD 699
>tr|Q6R0J1|Q6R0J1_TOBAC Heat shock protein 90 OS=Nicotiana tabacum GN=OINtHsp90 PE=2 SV=1 Length = 699
Score = 66.6 bits (161), Expect = 6e-10 Identities = 38/73 (52%), Positives = 43/73 (58%) Frame = +1
Query: 1 SVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIDDEAGPSXXXXXXXXXXXX 180 SVKD TSGFSL++PNTFGNRIHRMLKLGLSIDD++G + Sbjct: 629 SVKDLVLLLFETALLTSGFSLEEPNTFGNRIHRMLKLGLSIDDDSGDA--DVDMPALEDP 686
Query: 181 XXXXXXSKMEEVD 219 SKMEEVD Sbjct: 687 EADAEGSKMEEVD 699
>tr|Q14TB1|Q14TB1_TOBAC Heat shock protein 90 OS=Nicotiana tabacum GN=hsp90 PE=2 SV=1 Length = 699
Score = 66.6 bits (161), Expect = 6e-10 Identities = 38/73 (52%), Positives = 43/73 (58%) Frame = +1
Query: 1 SVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIDDEAGPSXXXXXXXXXXXX 180 SVKD TSGFSL++PNTFGNRIHRMLKLGLSIDD++G + Sbjct: 629 SVKDLVLLLFETALLTSGFSLEEPNTFGNRIHRMLKLGLSIDDDSGDA--DVDMPALEDP 686
Query: 181 XXXXXXSKMEEVD 219 SKMEEVD Sbjct: 687 EADAEGSKMEEVD 699
>tr|Q6UJX5|Q6UJX5_NICBE Molecular chaperone Hsp90-2 OS=Nicotiana benthamiana PE=2 SV=1 Length = 699
Score = 66.2 bits (160), Expect = 8e-10 Identities = 38/73 (52%), Positives = 42/73 (57%) Frame = +1
Query: 1 SVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIDDEAGPSXXXXXXXXXXXX 180 SVKD TSGFSLD+PNTFGNRIHRMLKLGLSID++ G + Sbjct: 629 SVKDLVLLLFETALLTSGFSLDEPNTFGNRIHRMLKLGLSIDEDCGDA--EADMPPLEDP 686
Query: 181 XXXXXXSKMEEVD 219 SKMEEVD Sbjct: 687 EADAEGSKMEEVD 699
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