DK946504
Clone id YMU02A01NGRL0012_N13
Library
Length 294
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0012_N13. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GATCTTCTTTGCTAGAGAAGATTCAAGGAGAGGGGTTCAAGCTGCAAAACCTTTCTATTA
GCTTTGATGACGCCACTGCTGATGCGGATGAGGATATTGCGTATGAATATGAGAGTACTT
CATGAGGAAATTTCTGCCGTTCACAAGTCCAATTGATTAGTTGGTTTACAAAGCTTCTTA
AAAATGGGAAGGTCTCTTACATGTTTTGCCGAGGTATCTTGTACACTTAATCAAGTAAAA
TCTAAAGAATGCCTGGTTAATGCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P56721
Definition sp|P56721|COLL_DROME Transcription factor collier OS=Drosophila melanogaster
Align length 16
Score (bit) 29.6
E-value 5.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946504|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0012_N13, 5'
(265 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P56721|COLL_DROME Transcription factor collier OS=Drosophila ... 30 5.0

>sp|P56721|COLL_DROME Transcription factor collier OS=Drosophila
melanogaster GN=kn PE=2 SV=2
Length = 575

Score = 29.6 bits (65), Expect = 5.0
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2

Query: 114 SHIHTQYPHPHQQWRH 67
+H H YPHPHQ W +
Sbjct: 549 AHPHHHYPHPHQPWHN 564


tr_hit_id A7PMF1
Definition tr|A7PMF1|A7PMF1_VITVI Chromosome chr14 scaffold_21, whole genome shotgun sequence OS=Vitis vinifera
Align length 21
Score (bit) 33.5
E-value 5.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946504|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0012_N13, 5'
(265 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7PMF1|A7PMF1_VITVI Chromosome chr14 scaffold_21, whole genom... 33 5.4
tr|Q5WMQ0|Q5WMQ0_ORYSJ Putative uncharacterized protein OSJNBa00... 33 7.1
tr|Q0DJ21|Q0DJ21_ORYSJ Os05g0337400 protein OS=Oryza sativa subs... 33 7.1
tr|B6TI14|B6TI14_MAIZE Putative uncharacterized protein OS=Zea m... 33 7.1
tr|A3B2T0|A3B2T0_ORYSJ Putative uncharacterized protein OS=Oryza... 33 7.1
tr|A2Y3C4|A2Y3C4_ORYSI Putative uncharacterized protein OS=Oryza... 33 7.1

>tr|A7PMF1|A7PMF1_VITVI Chromosome chr14 scaffold_21, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00020796001
PE=4 SV=1
Length = 153

Score = 33.5 bits (75), Expect = 5.4
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +3

Query: 3 SSLLEKIQGEGFKLQNLSISF 65
SSL+E IQG GFKLQ L++SF
Sbjct: 125 SSLVETIQGSGFKLQTLNLSF 145


>tr|Q5WMQ0|Q5WMQ0_ORYSJ Putative uncharacterized protein
OSJNBa0053E01.2 OS=Oryza sativa subsp. japonica
GN=OSJNBa0053E01.2 PE=4 SV=1
Length = 536

Score = 33.1 bits (74), Expect = 7.1
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +3

Query: 3 SSLLEKIQGEGFKLQNLSISF 65
S+L+E IQG GFKLQ LS+SF
Sbjct: 447 SNLVEAIQGAGFKLQTLSLSF 467


>tr|Q0DJ21|Q0DJ21_ORYSJ Os05g0337400 protein OS=Oryza sativa subsp.
japonica GN=Os05g0337400 PE=4 SV=1
Length = 346

Score = 33.1 bits (74), Expect = 7.1
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +3

Query: 3 SSLLEKIQGEGFKLQNLSISF 65
S+L+E IQG GFKLQ LS+SF
Sbjct: 120 SNLVEAIQGAGFKLQTLSLSF 140


>tr|B6TI14|B6TI14_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 161

Score = 33.1 bits (74), Expect = 7.1
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +3

Query: 3 SSLLEKIQGEGFKLQNLSISF 65
S+L+E IQG GFKLQ LS+SF
Sbjct: 123 SNLVEAIQGAGFKLQTLSLSF 143


>tr|A3B2T0|A3B2T0_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_017352 PE=4 SV=1
Length = 160

Score = 33.1 bits (74), Expect = 7.1
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +3

Query: 3 SSLLEKIQGEGFKLQNLSISF 65
S+L+E IQG GFKLQ LS+SF
Sbjct: 120 SNLVEAIQGAGFKLQTLSLSF 140


>tr|A2Y3C4|A2Y3C4_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_19510 PE=4 SV=1
Length = 160

Score = 33.1 bits (74), Expect = 7.1
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +3

Query: 3 SSLLEKIQGEGFKLQNLSISF 65
S+L+E IQG GFKLQ LS+SF
Sbjct: 120 SNLVEAIQGAGFKLQTLSLSF 140