DK946527 [AcEST]

DK946527
Clone id	YMU02A01NGRL0012_O15
Library	YMU02
Length	493
Definition	Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0012_O15. 5' end sequence.
Accession	DK946527
Tissue type	young leaves
Developmental stage	sporophyte
Contig ID	CL1Contig3
Sequence	TATCGTAGCGGGTATAGTTTAGTGGTAAAAGTGTGACTCGTCTCGCAGTGATTTTGATAG TTGAGGGATCGTATCTCGGCTAAATTAACTGAAAGAAAAAACTTTATCTTCGCAGAAAAT ATGTGTTTTCTTATTATTTCTCCAAAATTAGAGGTAGATTAATCAATCTCGTCACTCATT CATTTCAAGAACTAGGGAAGATAGTGACGAAGCAGAATTGTTTTGGTACCCCAAGAAATA CTTGGTTTAATTTCTACTTCCGGGGAGATAAATAAAGGAAAAAATCTATGGGTAGACGTC TAAGATAGCTGACTCATCGTCACTAAACCTCAGAGAATAAATCTGGGAAAGAAAGTTGGA ATAAATAAATCCGGGTTTGTCAAGATTATTGAACATCTATTTGGTTGAACGGGATCCCTC GTTTCAACAACTCGGTGAGATATATTTCCCTAAGGGTTTTTTCCTGAAAAAAAAAAAAAA AAAAAAAAAAAAA
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	A6TBC5
Definition	sp\|A6TBC5\|HIS7_KLEP7 Histidine biosynthesis bifunctional protein hisB OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
Align length	56
Score (bit)	30.4
E-value	4.0
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK946527\|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0012_O15, 5' (466 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|A6TBC5\|HIS7_KLEP7 Histidine biosynthesis bifunctional protein... 30 4.0 >sp\|A6TBC5\|HIS7_KLEP7 Histidine biosynthesis bifunctional protein hisB OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=hisB PE=3 SV=1 Length = 355 Score = 30.4 bits (67), Expect = 4.0 Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 8/56 (14%) Frame = +1 Query: 238 ILGLISTSG----EINKGKNLWVD----VDSLIVTKPQRINLGKKVGINKSGFV 381 +L I+T G E+N G +L++D V D+ L + + ++ LG K GIN+ GFV Sbjct: 204 MLDQIATHGGFRMEVNVGGDLYIDDHHTVEDTGLALGEALKLALGDKRGINRFGFV 259
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	A6D2J9
Definition	tr\|A6D2J9\|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibrio shilonii AK1
Align length	50
Score (bit)	35.0
E-value	1.8
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK946527\|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0012_O15, 5' (466 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|A6D2J9\|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibri... 35 1.8 tr\|Q2GVB5\|Q2GVB5_CHAGB Putative uncharacterized protein OS=Chaet... 33 9.1 >tr\|A6D2J9\|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibrio shilonii AK1 GN=VSAK1_01567 PE=4 SV=1 Length = 319 Score = 35.0 bits (79), Expect = 1.8 Identities = 16/50 (32%), Positives = 31/50 (62%) Frame = -3 Query: 188 LKMSDEIDSTSNFGEIIRKHIFSAKIKFFLSVNLAEIRSLNYQNHCET 39 LK +++E+D ST + ++++F A +F+L VNL + R++ Q C + Sbjct: 234 LKQIANELDISTKSINLFFKEYLFIAPKRFYLLVNLFKFRNILIQGKCSS 283 >tr\|Q2GVB5\|Q2GVB5_CHAGB Putative uncharacterized protein OS=Chaetomium globosum GN=CHGG_08089 PE=4 SV=1 Length = 1242 Score = 32.7 bits (73), Expect = 9.1 Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 11/58 (18%) Frame = -3 Query: 395 CSIILTNPDLFIPTFFPRFILGL-----------VTMSQLSTSTHRFFPLFISPEV 255 CS++++N DLF+ PR+I L VT +QL+ THR P F P++ Sbjct: 494 CSLLMSNVDLFLDNGDPRYIRTLLTQLYNSIMELRVTCTQLAAEGTHRSVPSFSRPDL 551