| DK946580 | 
  
    | Clone id | YMU02A01NGRL0013_B08 | 
  
    | Library | YMU02 | 
  
    | Length | 590 | 
  
    | Definition | Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0013_B08. 5' end sequence. | 
  
    | Accession | DK946580 | 
  
    | Tissue type | young leaves | 
  
    | Developmental stage | sporophyte | 
  
    | Contig ID | CL128Contig1 | 
  
    | Sequence | CTCATGGTGACTTTGGACAACATATGGTTTAAGCCTGTGGCCAAGGTTATGGATGACAGAGATGAAGCCATCAGGCAGAAGCTTATGAGTGTGCGCGACAATTCCGACGAGATCAAGAAG
 CTGCAAGAGCAGGCTGAGGCGATCCTCAAGGCCGCACGTGCAGAGACCACGGCGGAGCTC
 AACAAGATGAAGAGGGAGACGGCAGCAAAGCTTGATGCCAAGCTTCAGGAATCACGCGAA
 AGAATAGAGAAAGAGCTTGCAGAAGCTATTGCAAACCTAGAGGTGCAGAAGCAGGAGACT
 TTGAAGAGCCTTGACAAGGAAGTCCAAGATCTAAGTGAGGAGATTATTGCTAAGGTCATT
 CCCTTCAAGATATGAGATGTGAGTTCGTCCTATTTTTTTGCTCCTTGCACTTCATTTCCG
 GCTGGAGCGAGAGGCCCTTTCAACAATGCCCCCTCTCGCCCTGTTGTACCCGATCATGTA
 ATTTGTCCAAATGTAATTGCCTCTCACATTGATAATGCCATGTGCAAGACCTGGCTGAAT
 TCACCATGTGAATGTACTGTGTATATNTGAGCTATTGTAGCTTCGGATTT
 | 
  
    | ■■Homology search results ■■ | - | 
  
    | Swiss-Prot  (release 56.9) | Link to BlastX Result : Swiss-Prot | 
  
    | sp_hit_id | P31853 | 
  
    | Definition | sp|P31853|ATPX_SPIOL ATP synthase B' chain, chloroplastic OS=Spinacia oleracea | 
  
    | Align length | 121 | 
  
    | Score (bit) | 130.0 | 
  
    | E-value | 4.0e-30 | 
  
    | Report |  BLASTX 2.2.19 [Nov-02-2008]
 
 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
 Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
 "Gapped BLAST and PSI-BLAST: a new generation of protein database search
 programs",  Nucleic Acids Res. 25:3389-3402.
 
 Query= DK946580|Adiantum capillus-veneris mRNA, clone:
 YMU02A01NGRL0013_B08, 5'
 (590 letters)
 
 Database: uniprot_sprot.fasta
 412,525 sequences; 148,809,765 total letters
 
 Searching..................................................done
 
 
 
 Score    E
 Sequences producing significant alignments:                      (bits) Value
 
 sp|P31853|ATPX_SPIOL ATP synthase B' chain, chloroplastic OS=Spi...   130   4e-30
 sp|P48085|ATPX_CYAPA ATP synthase B' chain, cyanelle OS=Cyanopho...    75   2e-13
 sp|Q1XDP2|ATPX_PORYE ATP synthase B' chain, chloroplastic OS=Por...    73   1e-12
 sp|Q05367|ATPX_SYNP1 ATP synthase B' chain OS=Synechococcus sp. ...    72   2e-12
 sp|P51245|ATPX_PORPU ATP synthase B' chain, chloroplastic OS=Por...    72   3e-12
 sp|O78478|ATPX_GUITH ATP synthase B' chain, chloroplastic OS=Gui...    64   7e-10
 sp|P08446|ATPX_SYNP6 ATP synthase B' chain OS=Synechococcus sp. ...    62   2e-09
 sp|P21904|ATPF_PROMO ATP synthase B chain, sodium ion specific O...    61   5e-09
 sp|Q9TM29|ATPX_CYACA ATP synthase B' chain, chloroplastic OS=Cya...    60   8e-09
 sp|P27183|ATPX_SYNY3 ATP synthase B' chain OS=Synechocystis sp. ...    59   1e-08
 sp|Q02852|ATPX_ANTSP ATP synthase B' chain, chloroplastic OS=Ant...    58   3e-08
 sp|P20601|ATPF_BACME ATP synthase B chain OS=Bacillus megaterium...    58   3e-08
 sp|P26681|ATPF_ENTHR ATP synthase B chain OS=Enterococcus hirae ...    48   4e-05
 sp|Q5SHB3|CNPD_THET8 2',3'-cyclic-nucleotide 2'-phosphodiesteras...    46   2e-04
 sp|Q72HM1|CNPD_THET2 2',3'-cyclic-nucleotide 2'-phosphodiesteras...    45   2e-04
 sp|O29104|VATE_ARCFU V-type ATP synthase subunit E OS=Archaeoglo...    44   6e-04
 sp|Q5TZA2|CROCC_HUMAN Rootletin OS=Homo sapiens GN=CROCC PE=1 SV=1     44   8e-04
 sp|A2AJI0|MA7D1_MOUSE MAP7 domain-containing protein 1 OS=Mus mu...    43   0.001
 sp|Q49Z54|ATPF_STAS1 ATP synthase B chain OS=Staphylococcus sapr...    43   0.001
 sp|Q80UF4|SDCG8_MOUSE Serologically defined colon cancer antigen...    42   0.002
 sp|Q9Y4D1|DAAM1_HUMAN Disheveled-associated activator of morphog...    42   0.002
 sp|Q8CJ40|CROCC_MOUSE Rootletin OS=Mus musculus GN=Crocc PE=1 SV=1     41   0.005
 sp|P57120|ATPF_BUCAI ATP synthase B chain OS=Buchnera aphidicola...    41   0.005
 sp|Q9UPV0|CE164_HUMAN Centrosomal protein of 164 kDa OS=Homo sap...    40   0.007
 sp|O27351|DNAK_METTH Chaperone protein dnaK OS=Methanobacterium ...    40   0.009
 sp|P41172|ATPF_THIFE ATP synthase B chain OS=Thiobacillus ferroo...    40   0.009
 sp|O51876|ATPF_BUCAP ATP synthase B chain OS=Buchnera aphidicola...    40   0.009
 sp|Q48329|VATE_HALVO V-type ATP synthase subunit E OS=Halobacter...    40   0.011
 sp|Q62209|SYCP1_MOUSE Synaptonemal complex protein 1 OS=Mus musc...    40   0.011
 sp|Q15149|PLEC1_HUMAN Plectin-1 OS=Homo sapiens GN=PLEC1 PE=1 SV=3     40   0.011
 
 >sp|P31853|ATPX_SPIOL ATP synthase B' chain, chloroplastic
 OS=Spinacia oleracea GN=ATPG PE=1 SV=2
 Length = 222
 
 Score =  130 bits (328), Expect = 4e-30
 Identities = 61/121 (50%), Positives = 93/121 (76%)
 Frame = +1
 
 Query: 1   LMVTLDNIWFKPVAKVMDDRDEAIRQKLMSVRDNSDEIKKLQEQAEAILKAARAETTAEL 180
 LM  LD I++ P+   MD RD +I+++L  V+D S E+K+L+EQA A+++AARAE +A L
 Sbjct: 100 LMFALDKIYYTPLGDFMDKRDASIKEQLSGVKDTSSEVKQLEEQANAVMRAARAEISAAL 159
 
 Query: 181 NKMKRETAAKLDAKLQESRERIEKELAEAIANLEVQKQETLKSLDKEVQDLSEEIIAKVI 360
 NKMK+ET  +++AKL E R++IE EL EA+ +LE QK++T+KSLD ++  LS++I+ KV+
 Sbjct: 160 NKMKKETQLEVEAKLAEGRKKIEVELQEALGSLEQQKEDTIKSLDSQISALSDDIVKKVL 219
 
 Query: 361 P 363
 P
 Sbjct: 220 P 220
 
 
 >sp|P48085|ATPX_CYAPA ATP synthase B' chain, cyanelle OS=Cyanophora
 paradoxa GN=atpG PE=3 SV=1
 Length = 164
 
 Score = 75.1 bits (183), Expect = 2e-13
 Identities = 41/124 (33%), Positives = 70/124 (56%)
 Frame = +1
 
 Query: 1   LMVTLDNIWFKPVAKVMDDRDEAIRQKLMSVRDNSDEIKKLQEQAEAILKAARAETTAEL 180
 LM+ L+ +++KP+ K++D+R E I+           +  +L  Q E  +  AR   +
 Sbjct: 38  LMLILNAVFYKPLIKILDERKEYIQSNFNEAEKCLAQAAELTTQYETKITDARQNASKLT 97
 
 Query: 181 NKMKRETAAKLDAKLQESRERIEKELAEAIANLEVQKQETLKSLDKEVQDLSEEIIAKVI 360
 N  + E    +  KL+E++++ + ELA A   LE+QK E LKSL+ EVQ LS +I+ K++
 Sbjct: 98  NTTRSEIQRFVSEKLEEAQKKADSELASATNKLELQKDEALKSLESEVQTLSTKILEKLL 157
 
 Query: 361 PFKI 372
 +I
 Sbjct: 158 GIQI 161
 
 
 >sp|Q1XDP2|ATPX_PORYE ATP synthase B' chain, chloroplastic
 OS=Porphyra yezoensis GN=atpG PE=3 SV=1
 Length = 156
 
 Score = 72.8 bits (177), Expect = 1e-12
 Identities = 41/120 (34%), Positives = 69/120 (57%)
 Frame = +1
 
 Query: 1   LMVTLDNIWFKPVAKVMDDRDEAIRQKLMSVRDNSDEIKKLQEQAEAILKAARAETTAEL 180
 LMV L+ I++KPV KV+D+RDE IR  L +      +  +L  + E  L  AR     ++
 Sbjct: 33  LMVLLNTIFYKPVTKVLDERDEYIRTTLTTASSMLVKADELAAKYEEDLSEARRNAQLKI 92
 
 Query: 181 NKMKRETAAKLDAKLQESRERIEKELAEAIANLEVQKQETLKSLDKEVQDLSEEIIAKVI 360
 ++E    +   +++++   EK +AEA   L VQK+E LK+L+ +V  LS++I  K++
 Sbjct: 93  ASSQKEAQNIVSEDIKKAQLNAEKLIAEASKQLNVQKEEALKTLENQVDTLSDQIKVKLL 152
 
 
 >sp|Q05367|ATPX_SYNP1 ATP synthase B' chain OS=Synechococcus sp.
 (strain PCC 6716) GN=atpG PE=3 SV=1
 Length = 159
 
 Score = 72.0 bits (175), Expect = 2e-12
 Identities = 37/120 (30%), Positives = 70/120 (58%)
 Frame = +1
 
 Query: 1   LMVTLDNIWFKPVAKVMDDRDEAIRQKLMSVRDNSDEIKKLQEQAEAILKAARAETTAEL 180
 L V L+ + +KP+ + +D+RDE IR  L   ++   +  +L  Q E  L   R E  A +
 Sbjct: 39  LTVILNALLYKPLGQALDNRDEYIRTNLQQAKERLQQATELANQYEQELAYTRREAQAII 98
 
 Query: 181 NKMKRETAAKLDAKLQESRERIEKELAEAIANLEVQKQETLKSLDKEVQDLSEEIIAKVI 360
 + + E      A++  +++ ++ EL +A A ++ QKQ TL++L+ +V  LSE+++AK++
 Sbjct: 99  EEARAEAQKIATAEIAAAQQALQAELMKAQAEIDQQKQATLQALEGQVSSLSEQLLAKLL 158
 
 
 >sp|P51245|ATPX_PORPU ATP synthase B' chain, chloroplastic
 OS=Porphyra purpurea GN=atpG PE=3 SV=1
 Length = 158
 
 Score = 71.6 bits (174), Expect = 3e-12
 Identities = 37/120 (30%), Positives = 71/120 (59%)
 Frame = +1
 
 Query: 1   LMVTLDNIWFKPVAKVMDDRDEAIRQKLMSVRDNSDEIKKLQEQAEAILKAARAETTAEL 180
 LM+ L+ I++KPV K++D+RDE IR  L +      +  +L  + E  L  AR +  A++
 Sbjct: 33  LMLLLNTIFYKPVTKILDERDEYIRTTLTTASSMLVKADELAAKYEEDLSKARRDAQAKI 92
 
 Query: 181 NKMKRETAAKLDAKLQESRERIEKELAEAIANLEVQKQETLKSLDKEVQDLSEEIIAKVI 360
 +++  + +   +++++   EK + EA   L +QK+E LK+L+ +V  LS++I  K++
 Sbjct: 93  AASQKDAQSIVSEDIKKAQMNAEKLITEASKQLNIQKEEALKTLEDQVDTLSDQIKTKLL 152
 
 
 >sp|O78478|ATPX_GUITH ATP synthase B' chain, chloroplastic
 OS=Guillardia theta GN=atpG PE=3 SV=1
 Length = 163
 
 Score = 63.5 bits (153), Expect = 7e-10
 Identities = 35/119 (29%), Positives = 70/119 (58%)
 Frame = +1
 
 Query: 4   MVTLDNIWFKPVAKVMDDRDEAIRQKLMSVRDNSDEIKKLQEQAEAILKAARAETTAELN 183
 MV L+ +++ PVAKV+D+R+E IR+ L    D   + + + +Q E  L   R E    ++
 Sbjct: 39  MVILNAVFYNPVAKVLDEREEYIRKNLTQASDILAKAEAITKQYEKDLAQERREAQLIIS 98
 
 Query: 184 KMKRETAAKLDAKLQESRERIEKELAEAIANLEVQKQETLKSLDKEVQDLSEEIIAKVI 360
 ++E    +  +++++++  E  + EA + L  QKQ+ L +L+ +V  L+E+I +K++
 Sbjct: 99  VAQKEAQDIVALEIKQAQKDTELLVNEATSQLNSQKQKALSALEDQVNTLTEQIKSKLL 157
 
 
 >sp|P08446|ATPX_SYNP6 ATP synthase B' chain OS=Synechococcus sp.
 (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=atpG
 PE=3 SV=1
 Length = 158
 
 Score = 62.0 bits (149), Expect = 2e-09
 Identities = 34/120 (28%), Positives = 65/120 (54%)
 Frame = +1
 
 Query: 1   LMVTLDNIWFKPVAKVMDDRDEAIRQKLMSVRDNSDEIKKLQEQAEAILKAARAETTAEL 180
 L+  L+ +++KP  KV+DDRD+ +R      +    E+K L  Q E  L A R ++ A +
 Sbjct: 36  LVFLLNAVFYKPFGKVLDDRDQFVRGGRQDAKARLAEVKALTAQYEQELAATRKQSQALI 95
 
 Query: 181 NKMKRETAAKLDAKLQESRERIEKELAEAIANLEVQKQETLKSLDKEVQDLSEEIIAKVI 360
 + + E       +L E++   + +  +A   ++ QK   L++LD++V  LS +I+ K++
 Sbjct: 96  AEAQTEAGRIAAQQLAEAQREAQAQREQAQQEIDQQKAVALQALDQQVDALSHQILDKLL 155
 
 
 >sp|P21904|ATPF_PROMO ATP synthase B chain, sodium ion specific
 OS=Propionigenium modestum GN=atpF PE=1 SV=2
 Length = 168
 
 Score = 60.8 bits (146), Expect = 5e-09
 Identities = 36/124 (29%), Positives = 63/124 (50%)
 Frame = +1
 
 Query: 1   LMVTLDNIWFKPVAKVMDDRDEAIRQKLMSVRDNSDEIKKLQEQAEAILKAARAETTAEL 180
 LM      + KP+AKV+D R E I   L     + +   K   +A+ I+K+A+ E    L
 Sbjct: 25  LMFFFKKYFQKPIAKVLDARKEKIANDLKQAEIDKEMAAKANGEAQGIVKSAKTEANEML 84
 
 Query: 181 NKMKRETAAKLDAKLQESRERIEKELAEAIANLEVQKQETLKSLDKEVQDLSEEIIAKVI 360
 + +++   + +  L+E+  + EK L  A   +E  K++  K L  EV DL+ ++  K+I
 Sbjct: 85  LRAEKKADERKETILKEANTQREKMLKSAEVEIEKMKEQARKELQLEVTDLAVKLAEKMI 144
 
 Query: 361 PFKI 372
 K+
 Sbjct: 145 NEKV 148
 
 
 >sp|Q9TM29|ATPX_CYACA ATP synthase B' chain, chloroplastic
 OS=Cyanidium caldarium GN=atpG PE=3 SV=1
 Length = 157
 
 Score = 60.1 bits (144), Expect = 8e-09
 Identities = 31/120 (25%), Positives = 73/120 (60%)
 Frame = +1
 
 Query: 1   LMVTLDNIWFKPVAKVMDDRDEAIRQKLMSVRDNSDEIKKLQEQAEAILKAARAETTAEL 180
 +M+ LD  ++KP+ KV+ DR+  I + L S    S++ K+   + E ++  ++ E+   +
 Sbjct: 34  IMLILDITFYKPINKVLKDRENYILKTLESATQISEKTKETLARYEEVILKSKKESQQLI 93
 
 Query: 181 NKMKRETAAKLDAKLQESRERIEKELAEAIANLEVQKQETLKSLDKEVQDLSEEIIAKVI 360
 + +K +T   +  +L +++    + ++++I  L  +K++TLK L+++ ++LS++I  K+I
 Sbjct: 94  DSIKTKTEHDIVNELIQTQNSTREFISKSIKELYRKKEQTLKVLEEDTENLSDKIYLKLI 153
 
 
 >sp|P27183|ATPX_SYNY3 ATP synthase B' chain OS=Synechocystis sp.
 (strain PCC 6803) GN=atpG PE=3 SV=1
 Length = 143
 
 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 33/120 (27%), Positives = 64/120 (53%)
 Frame = +1
 
 Query: 1   LMVTLDNIWFKPVAKVMDDRDEAIRQKLMSVRDNSDEIKKLQEQAEAILKAARAETTAEL 180
 L   L+ I++KP+ KV+D+R + IR      R+   + K + ++ E  +  AR ++ A +
 Sbjct: 18  LAFLLNAIFYKPMNKVLDERADYIRTNEEDARERLAKAKAITQEYEQQITDARRQSQAVI 77
 
 Query: 181 NKMKRETAAKLDAKLQESRERIEKELAEAIANLEVQKQETLKSLDKEVQDLSEEIIAKVI 360
 + E       K+ E++   +++   A   +E Q+Q  L SL++EV  LS +I+ K++
 Sbjct: 78  ADAQAEARRLAAEKIAEAQRESQRQKETAAQEIEAQRQSALSSLEQEVAALSNQILHKLL 137
 
 
 
 | 
  
    | TrEMBL  (release 39.9) | Link to BlastX Result : TrEMBL | 
  
    | tr_hit_id | A9T949 | 
  
    | Definition | tr|A9T949|A9T949_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens | 
  
    | Align length | 124 | 
  
    | Score (bit) | 181.0 | 
  
    | E-value | 2.0e-44 | 
  
    | Report |  |