DK946582 |
Clone id |
YMU02A01NGRL0013_B10 |
Library |
YMU02 |
Length |
589 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0013_B10. 5' end sequence. |
Accession |
DK946582 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL133Contig1 |
Sequence |
GGGTCTTCTCTCTCTCTCGCTCGCTCGCGGAGTGTGGACGGAGAGCTTCGGCTCTCTTCT TTCTGCTCCACCTCCGGAGCATATCCCCTTCCATTGCCGTATCAGTCTCAGCATGGAGAG GGATCTTGCTCTTGGGTGTTCCCAAACTTTGAACACAGCGGTAGTGAGGGCATCTCACCT TCAGAATGCAAGTCGACAGGCTGTTCCATCTCGGCTTCAGTGGAAGCAGAGTCCAATTGG AAATGCTTTCCAGAAGTCACGGTGGCTGATGCCCAGAGTAGGGAAGACGAGTCTCCGGCA CTGTGTTGTGAAATCGGACATGACAGCTAGTGCTGCTACAGCACCTGCTGCCCCACTGTT ACTCGAAACACCAAGCGGGCAATTTCTAGCGGAGTTGTTGCAAAATCATCCTTACCTTGT GTGTGCAGCAGCAGAGCAGCAGCTCGAAACGTTAGCGGAGGCTAGAGACGCAGCAGCCAC AAGTCAAGAGCAATCGAGTCCCATGGGCACTGAGATGATTCTTTACAAACGTATAGCAGA GCTTAAAGCACAGGANAGGTGCAAGGCATTAGAGGATATTATGTATGCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9Z287 |
Definition |
sp|Q9Z287|KR121_MOUSE Keratin-associated protein 12-1 OS=Mus musculus |
Align length |
99 |
Score (bit) |
36.6 |
E-value |
0.096 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LPW2 |
Definition |
tr|B8LPW2|B8LPW2_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
71 |
Score (bit) |
63.9 |
E-value |
6.0e-09 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK946582|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0013_B10, 5' (589 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LPW2|B8LPW2_PICSI Putative uncharacterized protein OS=Picea... 64 6e-09 tr|Q9LP80|Q9LP80_ARATH T1N15.6 (Putative uncharacterized protein... 64 8e-09 tr|Q2V4I1|Q2V4I1_ARATH Uncharacterized protein At1g48450.2 OS=Ar... 64 8e-09 tr|A7QTZ7|A7QTZ7_VITVI Chromosome undetermined scaffold_174, who... 63 1e-08 tr|Q9LVJ0|Q9LVJ0_ARATH Gb|AAF02142.1 (Putative uncharacterized p... 59 3e-07 tr|Q8W4L9|Q8W4L9_ARATH Putative uncharacterized protein At3g1780... 59 3e-07 tr|Q0WNF6|Q0WNF6_ARATH Putative uncharacterized protein At3g1780... 59 3e-07 tr|A9PIE4|A9PIE4_POPTR Putative uncharacterized protein OS=Popul... 58 5e-07 tr|Q7X9D6|Q7X9D6_MARQU ABRH7 (Fragment) OS=Marsilea quadrifolia ... 57 6e-07 tr|A7PSL3|A7PSL3_VITVI Chromosome chr6 scaffold_28, whole genome... 57 8e-07 tr|A5BNG8|A5BNG8_VITVI Putative uncharacterized protein OS=Vitis... 57 8e-07 tr|A9PF86|A9PF86_POPTR Putative uncharacterized protein OS=Popul... 57 1e-06 tr|B7FJF5|B7FJF5_MEDTR Putative uncharacterized protein OS=Medic... 55 2e-06 tr|Q10DW0|Q10DW0_ORYSJ Os03g0717900 protein OS=Oryza sativa subs... 52 3e-05 tr|Q10DV9|Q10DV9_ORYSJ cDNA clone:001-023-C09, full insert seque... 52 3e-05 tr|A3AM41|A3AM41_ORYSJ Putative uncharacterized protein OS=Oryza... 52 3e-05 tr|A2XLF0|A2XLF0_ORYSI Putative uncharacterized protein OS=Oryza... 52 3e-05 tr|Q7X6P4|Q7X6P4_ORYSA OSJNBa0006A01.21 protein (OSJNba0093F12.3... 49 2e-04 tr|Q0JAJ2|Q0JAJ2_ORYSJ Os04g0595100 protein OS=Oryza sativa subs... 49 2e-04 tr|B4G0A9|B4G0A9_MAIZE Putative uncharacterized protein OS=Zea m... 49 2e-04 tr|B6TEU7|B6TEU7_MAIZE Putative uncharacterized protein OS=Zea m... 48 4e-04 tr|B8ATK2|B8ATK2_ORYSI Putative uncharacterized protein OS=Oryza... 44 0.005 tr|A7PC12|A7PC12_VITVI Chromosome chr2 scaffold_11, whole genome... 44 0.009 tr|B6UFZ7|B6UFZ7_MAIZE Putative uncharacterized protein OS=Zea m... 42 0.020 tr|B6L7U9|B6L7U9_BRAFL Putative uncharacterized protein OS=Branc... 41 0.044 tr|B8LKC1|B8LKC1_PICSI Putative uncharacterized protein OS=Picea... 40 0.13 tr|Q9STU6|Q9STU6_ARATH Putative uncharacterized protein T22A6.32... 37 0.64 tr|Q9SB46|Q9SB46_ARATH Rab geranylgeranyl transferase like prote... 37 0.64 tr|Q9M0L4|Q9M0L4_ARATH Rab geranylgeranyl transferase like prote... 37 0.64 tr|Q8VYB7|Q8VYB7_ARATH Putative Rab geranylgeranyl transferase O... 37 0.64
>tr|B8LPW2|B8LPW2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 434
Score = 63.9 bits (154), Expect = 6e-09 Identities = 35/71 (49%), Positives = 47/71 (66%) Frame = +2
Query: 377 GQFLAELLQNHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQX 556 GQFL++LL++HP+L+ RDAAA Q+ S TE++LY+RIAE+KA Sbjct: 104 GQFLSQLLKDHPHLLPAAVEQQLERLVADRDAAA-QQDPPSSTSTELVLYRRIAEVKAAE 162
Query: 557 RCKALEDIMYA 589 R KALE+IMYA Sbjct: 163 RRKALEEIMYA 173
>tr|Q9LP80|Q9LP80_ARATH T1N15.6 (Putative uncharacterized protein At1g48450) (At1g48450/T1N15_5) OS=Arabidopsis thaliana GN=At1g48450 PE=2 SV=1 Length = 423
Score = 63.5 bits (153), Expect = 8e-09 Identities = 31/71 (43%), Positives = 48/71 (67%) Frame = +2
Query: 377 GQFLAELLQNHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQX 556 GQFL+++L +HP+LV RDA S++ SS +GT+++LY+RIAE+K + Sbjct: 93 GQFLSQILVSHPHLVPAAVEQQLEQLQIDRDAEEQSKDASSVLGTDIVLYRRIAEVKEKE 152
Query: 557 RCKALEDIMYA 589 R +ALE+I+YA Sbjct: 153 RRRALEEILYA 163
>tr|Q2V4I1|Q2V4I1_ARATH Uncharacterized protein At1g48450.2 OS=Arabidopsis thaliana GN=At1g48450 PE=4 SV=1 Length = 342
Score = 63.5 bits (153), Expect = 8e-09 Identities = 31/71 (43%), Positives = 48/71 (67%) Frame = +2
Query: 377 GQFLAELLQNHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQX 556 GQFL+++L +HP+LV RDA S++ SS +GT+++LY+RIAE+K + Sbjct: 93 GQFLSQILVSHPHLVPAAVEQQLEQLQIDRDAEEQSKDASSVLGTDIVLYRRIAEVKEKE 152
Query: 557 RCKALEDIMYA 589 R +ALE+I+YA Sbjct: 153 RRRALEEILYA 163
>tr|A7QTZ7|A7QTZ7_VITVI Chromosome undetermined scaffold_174, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006608001 PE=4 SV=1 Length = 362
Score = 62.8 bits (151), Expect = 1e-08 Identities = 34/71 (47%), Positives = 47/71 (66%) Frame = +2
Query: 377 GQFLAELLQNHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQX 556 GQFL+++L +HP+LV RDA +E+SS GTE++LY+RIAE+KA Sbjct: 36 GQFLSQILISHPHLVPAAVEQQLEQLQTDRDAEE-HKEESSASGTELVLYRRIAEVKANE 94
Query: 557 RCKALEDIMYA 589 R KALE+I+YA Sbjct: 95 RKKALEEILYA 105
>tr|Q9LVJ0|Q9LVJ0_ARATH Gb|AAF02142.1 (Putative uncharacterized protein At3g17800) OS=Arabidopsis thaliana GN=At3g17800 PE=2 SV=1 Length = 421
Score = 58.5 bits (140), Expect = 3e-07 Identities = 28/71 (39%), Positives = 45/71 (63%) Frame = +2
Query: 377 GQFLAELLQNHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQX 556 GQFL+++L +HP+LV RD+ +++ +S GT+++LY+RIAELK Sbjct: 102 GQFLSQILVSHPHLVPAAVEQQLEQLQTDRDSQGQNKDSASVPGTDIVLYRRIAELKENE 161
Query: 557 RCKALEDIMYA 589 R + LE+I+YA Sbjct: 162 RRRTLEEILYA 172
>tr|Q8W4L9|Q8W4L9_ARATH Putative uncharacterized protein At3g17800; MEB5.2 (Putative uncharacterized protein At3g17800) OS=Arabidopsis thaliana GN=At3g17800/MEB5.2 PE=2 SV=1 Length = 421
Score = 58.5 bits (140), Expect = 3e-07 Identities = 28/71 (39%), Positives = 45/71 (63%) Frame = +2
Query: 377 GQFLAELLQNHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQX 556 GQFL+++L +HP+LV RD+ +++ +S GT+++LY+RIAELK Sbjct: 102 GQFLSQILVSHPHLVPAAVEQQLEQLQTDRDSQGQNKDSASVPGTDIVLYRRIAELKENE 161
Query: 557 RCKALEDIMYA 589 R + LE+I+YA Sbjct: 162 RRRTLEEILYA 172
>tr|Q0WNF6|Q0WNF6_ARATH Putative uncharacterized protein At3g17800 OS=Arabidopsis thaliana GN=At3g17800 PE=2 SV=1 Length = 421
Score = 58.5 bits (140), Expect = 3e-07 Identities = 28/71 (39%), Positives = 45/71 (63%) Frame = +2
Query: 377 GQFLAELLQNHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQX 556 GQFL+++L +HP+LV RD+ +++ +S GT+++LY+RIAELK Sbjct: 102 GQFLSQILVSHPHLVPAAVEQQLEQLQTDRDSQGQNKDSASVPGTDIVLYRRIAELKENE 161
Query: 557 RCKALEDIMYA 589 R + LE+I+YA Sbjct: 162 RRRTLEEILYA 172
>tr|A9PIE4|A9PIE4_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 417
Score = 57.8 bits (138), Expect = 5e-07 Identities = 31/71 (43%), Positives = 44/71 (61%) Frame = +2
Query: 377 GQFLAELLQNHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQX 556 GQFL+++L +HP+LV RD+ +E S GT+++LY+RIAE KA Sbjct: 93 GQFLSQILVSHPHLVPAAVEQQLEQLQTDRDSEK-QKEDPSATGTDLVLYRRIAEAKAND 151
Query: 557 RCKALEDIMYA 589 R KALE+I+YA Sbjct: 152 RRKALEEILYA 162
>tr|Q7X9D6|Q7X9D6_MARQU ABRH7 (Fragment) OS=Marsilea quadrifolia PE=2 SV=1 Length = 176
Score = 57.4 bits (137), Expect = 6e-07 Identities = 49/147 (33%), Positives = 65/147 (44%), Gaps = 7/147 (4%) Frame = +2
Query: 113 MERDLALGCSQTLNTAVVRAS--HLQNASRQAV-----PSRLQWKQSPIGNAFQKSRWLM 271 ME LA+ + LNTA V + H A+RQAV PSR Q G + +S Sbjct: 31 MESGLAIAGFKGLNTAAVGSVSWHSHGATRQAVGSSSWPSRKQGLNVK-GTSLDRSWHDA 89
Query: 272 PRVGKTSLRHCVVKSDMXXXXXXXXXXXXXXXXXXGQFLAELLQNHPYLVCXXXXXXXXX 451 V + ++M GQFL ELLQ+HP+LV Sbjct: 90 STVSNRRKTRLTINAEMTASASTTPLAPLIPESPSGQFLTELLQSHPHLVPAAAEQQLET 149
Query: 452 XXXXRDAAATSQEQSSPMGTEMILYKR 532 R+AA+ SQEQ +P G E++LYKR Sbjct: 150 LAEAREAAS-SQEQPTPDGNELVLYKR 175
>tr|A7PSL3|A7PSL3_VITVI Chromosome chr6 scaffold_28, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022976001 PE=4 SV=1 Length = 342
Score = 57.0 bits (136), Expect = 8e-07 Identities = 32/70 (45%), Positives = 43/70 (61%) Frame = +2
Query: 377 GQFLAELLQNHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQX 556 G+FL E+L +HP+LV RDA QE SS G E++LY+RIA++KA Sbjct: 38 GRFLTEILISHPHLVPAAVERQLEQFQTDRDAEGHKQE-SSASGIELLLYRRIAKVKANE 96
Query: 557 RCKALEDIMY 586 R KALE+I+Y Sbjct: 97 RKKALEEILY 106
|