DK946613
Clone id YMU02A01NGRL0013_C20
Library
Length 385
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0013_C20. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GGGTTGATAACTGCGAAGGATCATGCTTCAGTGCAGTTGAACATTGGGCATTTGGATGAA
AATGGCCTTTACACTTGCCAATTTACCACATTTGCCTTGTCTGGGTTTGTCCGAGCGCAG
GGGGATGCAGATAGTGCTTTTGATCGGCTTTGGCAGAAACAGAGGGCAAAAATTGGCCAG
CAGCTGTAGTGGGCAAGCTCTTAACTCTTTATTAATGTTTTGTTTCCATGAGTAAAAGGA
TTTTAGATTTTAATGACTTTTCAAGCTGCGCTTGGAAAGCTCTTAGTCTGTGAACAAGGT
TTGAATTCGATGAGACTCTACTCGTGAGAACTTTCTCTAATTGAAAAGGCTTTTTAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P35687
Definition sp|P35687|RS21_ORYSJ 40S ribosomal protein S21 OS=Oryza sativa subsp. japonica
Align length 56
Score (bit) 97.8
E-value 1.0e-20
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946613|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0013_C20, 5'
(342 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P35687|RS21_ORYSJ 40S ribosomal protein S21 OS=Oryza sativa s... 98 1e-20
sp|Q3E902|RS212_ARATH 40S ribosomal protein S21-2 OS=Arabidopsis... 95 1e-19
sp|Q9M337|RS211_ARATH 40S ribosomal protein S21-1 OS=Arabidopsis... 95 1e-19
sp|Q41852|RS21_MAIZE 40S ribosomal protein S21 OS=Zea mays GN=RP... 94 2e-19
sp|Q9SMI2|RS21_CYAPA 40S ribosomal protein S21 OS=Cyanophora par... 63 5e-10
sp|Q54BN4|RS21_DICDI 40S ribosomal protein S21 OS=Dictyostelium ... 57 4e-08
sp|Q4WI01|RS21_ASPFU 40S ribosomal protein S21 OS=Aspergillus fu... 56 6e-08
sp|Q75BL6|RS21_ASHGO 40S ribosomal protein S21 OS=Ashbya gossypi... 56 6e-08
sp|Q6CXT6|RS21_KLULA 40S ribosomal protein S21 OS=Kluyveromyces ... 52 7e-07
sp|P0C0V8|RS21A_YEAST 40S ribosomal protein S21-A OS=Saccharomyc... 49 1e-05
sp|Q9P844|RS21_CANAL 40S ribosomal protein S21 OS=Candida albica... 48 1e-05
sp|Q3E754|RS21B_YEAST 40S ribosomal protein S21-B OS=Saccharomyc... 48 1e-05
sp|Q4KTC0|RS21_SUBDO 40S ribosomal protein S21 OS=Suberites domu... 48 2e-05
sp|Q6FMF8|RS21_CANGA 40S ribosomal protein S21 OS=Candida glabra... 47 2e-05
sp|P05764|RS21_SCHPO 40S ribosomal protein S21 OS=Schizosaccharo... 45 1e-04
sp|O93798|RS21_NEUCR 40S ribosomal protein S21 OS=Neurospora cra... 45 1e-04
sp|Q90YQ2|RS21_ICTPU 40S ribosomal protein S21 OS=Ictalurus punc... 45 1e-04
sp|Q7ZUG5|RS21_DANRE 40S ribosomal protein S21 OS=Danio rerio GN... 45 1e-04
sp|Q6AZJ9|RS21_XENLA 40S ribosomal protein S21 OS=Xenopus laevis... 44 3e-04
sp|Q86CT3|RS21_BRABE 40S ribosomal protein S21 OS=Branchiostoma ... 44 3e-04
sp|Q6DDC6|RS21_XENTR 40S ribosomal protein S21 OS=Xenopus tropic... 44 3e-04
sp|P63221|RS21_PIG 40S ribosomal protein S21 OS=Sus scrofa GN=RP... 44 3e-04
sp|P63220|RS21_HUMAN 40S ribosomal protein S21 OS=Homo sapiens G... 44 3e-04
sp|Q32PB8|RS21_BOVIN 40S ribosomal protein S21 OS=Bos taurus GN=... 44 3e-04
sp|Q6RF66|RS21_PECGU 40S ribosomal protein S21 OS=Pectinaria gou... 43 4e-04
sp|P05765|RS21_RAT 40S ribosomal protein S21 OS=Rattus norvegicu... 42 0.001
sp|Q9CQR2|RS21_MOUSE 40S ribosomal protein S21 OS=Mus musculus G... 42 0.001
sp|Q8I7N7|RS21_CERCA 40S ribosomal protein S21 OS=Ceratitis capi... 41 0.002
sp|Q4PM64|RS21_IXOSC 40S ribosomal protein S21 OS=Ixodes scapula... 38 0.014
sp|Q4GXP2|RS21_BIPLU 40S ribosomal protein S21 OS=Biphyllus luna... 37 0.023

>sp|P35687|RS21_ORYSJ 40S ribosomal protein S21 OS=Oryza sativa
subsp. japonica GN=RPS21 PE=3 SV=1
Length = 82

Score = 97.8 bits (242), Expect = 1e-20
Identities = 44/56 (78%), Positives = 52/56 (92%)
Frame = +3

Query: 3 KDHASVQLNIGHLDENGLYTCQFTTFALSGFVRAQGDADSAFDRLWQKQRAKIGQQ 170
KDHASVQ+NIGH+DENGLY +FTTFALSGF+RAQGDADSA DRLWQK++A++ QQ
Sbjct: 27 KDHASVQINIGHVDENGLYDGRFTTFALSGFIRAQGDADSALDRLWQKRKAEVKQQ 82


>sp|Q3E902|RS212_ARATH 40S ribosomal protein S21-2 OS=Arabidopsis
thaliana GN=RPS21C PE=3 SV=1
Length = 85

Score = 94.7 bits (234), Expect = 1e-19
Identities = 45/57 (78%), Positives = 49/57 (85%)
Frame = +3

Query: 3 KDHASVQLNIGHLDENGLYTCQFTTFALSGFVRAQGDADSAFDRLWQKQRAKIGQQL 173
KDHASVQLNIGHLD NGLYT QFTTFAL GFVRAQGDADS DRLWQK++ + Q+L
Sbjct: 27 KDHASVQLNIGHLDANGLYTGQFTTFALCGFVRAQGDADSGVDRLWQKKKVEAKQKL 83


>sp|Q9M337|RS211_ARATH 40S ribosomal protein S21-1 OS=Arabidopsis
thaliana GN=RPS21B PE=2 SV=1
Length = 82

Score = 94.7 bits (234), Expect = 1e-19
Identities = 45/56 (80%), Positives = 48/56 (85%)
Frame = +3

Query: 3 KDHASVQLNIGHLDENGLYTCQFTTFALSGFVRAQGDADSAFDRLWQKQRAKIGQQ 170
KDHASVQLNIGHLD NGLYT QFTTFAL GFVRAQGDADS DRLWQK++ + QQ
Sbjct: 27 KDHASVQLNIGHLDANGLYTGQFTTFALCGFVRAQGDADSGVDRLWQKKKVEAKQQ 82


>sp|Q41852|RS21_MAIZE 40S ribosomal protein S21 OS=Zea mays GN=RPS21
PE=3 SV=1
Length = 81

Score = 94.0 bits (232), Expect = 2e-19
Identities = 44/55 (80%), Positives = 49/55 (89%)
Frame = +3

Query: 3 KDHASVQLNIGHLDENGLYTCQFTTFALSGFVRAQGDADSAFDRLWQKQRAKIGQ 167
KDHASVQ+NIGHLD NGLY FTTFALSGFVRAQGDADS+ DRLWQK++A+I Q
Sbjct: 27 KDHASVQINIGHLDANGLYDGHFTTFALSGFVRAQGDADSSLDRLWQKKKAEIKQ 81


>sp|Q9SMI2|RS21_CYAPA 40S ribosomal protein S21 OS=Cyanophora
paradoxa GN=RPS21 PE=3 SV=1
Length = 82

Score = 62.8 bits (151), Expect = 5e-10
Identities = 29/48 (60%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Frame = +3

Query: 6 DHASVQLNIGHLDEN-GLYTCQFTTFALSGFVRAQGDADSAFDRLWQK 146
DHA+VQ+N+GH+D N GLYT +TTFAL GFVR+ G++D+A +RL K
Sbjct: 28 DHAAVQINVGHVDPNSGLYTGDYTTFALCGFVRSMGESDAALNRLCVK 75


>sp|Q54BN4|RS21_DICDI 40S ribosomal protein S21 OS=Dictyostelium
discoideum GN=rps21 PE=3 SV=1
Length = 78

Score = 56.6 bits (135), Expect = 4e-08
Identities = 25/49 (51%), Positives = 36/49 (73%)
Frame = +3

Query: 3 KDHASVQLNIGHLDENGLYTCQFTTFALSGFVRAQGDADSAFDRLWQKQ 149
KDHASVQ+NIGH++ G+Y + T FA GF+R G +D+A +RL Q++
Sbjct: 24 KDHASVQINIGHVNAEGIYNGEQTIFAFCGFLRNNGQSDAALNRLAQQK 72


>sp|Q4WI01|RS21_ASPFU 40S ribosomal protein S21 OS=Aspergillus
fumigatus GN=rps21 PE=3 SV=1
Length = 88

Score = 55.8 bits (133), Expect = 6e-08
Identities = 24/47 (51%), Positives = 37/47 (78%)
Frame = +3

Query: 6 DHASVQLNIGHLDENGLYTCQFTTFALSGFVRAQGDADSAFDRLWQK 146
DHASVQ++I +DENG YT + ++AL GF+RA+G++D + +RL Q+
Sbjct: 28 DHASVQISIAKVDENGRYTGENQSYALCGFIRARGESDDSLNRLCQR 74


>sp|Q75BL6|RS21_ASHGO 40S ribosomal protein S21 OS=Ashbya gossypii
GN=RPS21 PE=3 SV=1
Length = 87

Score = 55.8 bits (133), Expect = 6e-08
Identities = 27/49 (55%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Frame = +3

Query: 3 KDHASVQLNIGHLDENG-LYTCQFTTFALSGFVRAQGDADSAFDRLWQK 146
KDH SVQ+NI +DENG ++ T+ALSG+VRA+G+AD + +RL QK
Sbjct: 27 KDHGSVQINIAQVDENGHAVPGEYITYALSGYVRARGEADDSMNRLAQK 75


>sp|Q6CXT6|RS21_KLULA 40S ribosomal protein S21 OS=Kluyveromyces
lactis GN=RPS21 PE=3 SV=1
Length = 87

Score = 52.4 bits (124), Expect = 7e-07
Identities = 24/49 (48%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Frame = +3

Query: 3 KDHASVQLNIGHLDENG-LYTCQFTTFALSGFVRAQGDADSAFDRLWQK 146
KDH+SVQ+NI +DE G ++ T+ALSG++RA+G+AD + +RL Q+
Sbjct: 27 KDHSSVQINIAQVDEEGRAIPGEYVTYALSGYIRARGEADDSLNRLAQQ 75


>sp|P0C0V8|RS21A_YEAST 40S ribosomal protein S21-A OS=Saccharomyces
cerevisiae GN=RPS21A PE=1 SV=1
Length = 87

Score = 48.5 bits (114), Expect = 1e-05
Identities = 22/47 (46%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Frame = +3

Query: 6 DHASVQLNIGHLDENG-LYTCQFTTFALSGFVRAQGDADSAFDRLWQ 143
DHASVQ+N+ +DE G ++ T+ALSG+VR++G++D + +RL Q
Sbjct: 28 DHASVQINVAKVDEEGRAIPGEYVTYALSGYVRSRGESDDSLNRLAQ 74


tr_hit_id A9NY16
Definition tr|A9NY16|A9NY16_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 55
Score (bit) 100.0
E-value 3.0e-20
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946613|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0013_C20, 5'
(342 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9NY16|A9NY16_PICSI Putative uncharacterized protein OS=Picea... 100 3e-20
tr|A9NJY4|A9NJY4_PICSI Putative uncharacterized protein OS=Picea... 100 3e-20
tr|Q7Y199|Q7Y199_ORYSJ 40S subunit ribosomal protein OS=Oryza sa... 98 2e-19
tr|Q10LK3|Q10LK3_ORYSJ Os03g0345200 protein OS=Oryza sativa subs... 98 2e-19
tr|B8APE8|B8APE8_ORYSI Putative uncharacterized protein OS=Oryza... 98 2e-19
tr|A5B0Z2|A5B0Z2_VITVI Putative uncharacterized protein OS=Vitis... 97 4e-19
tr|A9TQC7|A9TQC7_PHYPA Predicted protein OS=Physcomitrella paten... 96 9e-19
tr|Q8LCB7|Q8LCB7_ARATH 40S ribosomal protein S21 homolog OS=Arab... 95 2e-18
tr|A9RI12|A9RI12_PHYPA Predicted protein OS=Physcomitrella paten... 95 2e-18
tr|Q60DM0|Q60DM0_ORYSJ Os03g0667800 protein OS=Oryza sativa subs... 94 3e-18
tr|B8AP26|B8AP26_ORYSI Putative uncharacterized protein OS=Oryza... 94 3e-18
tr|B6TXC9|B6TXC9_MAIZE 40S ribosomal protein S21 OS=Zea mays PE=... 94 3e-18
tr|A9TSH2|A9TSH2_PHYPA Predicted protein OS=Physcomitrella paten... 94 4e-18
tr|A9SFC5|A9SFC5_PHYPA Predicted protein (Fragment) OS=Physcomit... 94 4e-18
tr|B6SPN3|B6SPN3_MAIZE 40S ribosomal protein S21 OS=Zea mays PE=... 93 6e-18
tr|B6SH48|B6SH48_MAIZE 40S ribosomal protein S21 OS=Zea mays PE=... 93 6e-18
tr|A9PC55|A9PC55_POPTR Putative uncharacterized protein OS=Popul... 92 1e-17
tr|A9PC23|A9PC23_POPTR Putative uncharacterized protein OS=Popul... 92 1e-17
tr|B4FDE3|B4FDE3_MAIZE 40S ribosomal protein S21 OS=Zea mays PE=... 92 2e-17
tr|A5BUA6|A5BUA6_VITVI Putative uncharacterized protein (Chromos... 92 2e-17
tr|Q2HVJ1|Q2HVJ1_MEDTR Ribosomal protein S21e OS=Medicago trunca... 90 6e-17
tr|P93626|P93626_MAIZE 40S ribosomal subunit protein S21 OS=Zea ... 88 2e-16
tr|B7FGU9|B7FGU9_MEDTR Putative uncharacterized protein OS=Medic... 87 5e-16
tr|A4S8E0|A4S8E0_OSTLU Ribosomal protein S21, component of cytos... 77 4e-13
tr|A8IXG3|A8IXG3_CHLRE Ribosomal protein S21 OS=Chlamydomonas re... 75 2e-12
tr|A9NU05|A9NU05_PICSI Putative uncharacterized protein OS=Picea... 70 4e-11
tr|A7Q4R9|A7Q4R9_VITVI Chromosome chr10 scaffold_50, whole genom... 65 1e-09
tr|Q10LK2|Q10LK2_ORYSJ 40S ribosomal protein S21, putative, expr... 65 2e-09
tr|A3E3H7|A3E3H7_PFIPI 40S ribosomal protein OS=Pfiesteria pisci... 64 3e-09
tr|B6HC25|B6HC25_PENCH Pc18g05330 protein OS=Penicillium chrysog... 62 1e-08

>tr|A9NY16|A9NY16_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=4 SV=1
Length = 81

Score = 100 bits (250), Expect = 3e-20
Identities = 46/55 (83%), Positives = 51/55 (92%)
Frame = +3

Query: 3 KDHASVQLNIGHLDENGLYTCQFTTFALSGFVRAQGDADSAFDRLWQKQRAKIGQ 167
KDHASVQLNIGHLDENG+YT QFTTFALSGFVRAQGDADS DRLWQK++ ++GQ
Sbjct: 27 KDHASVQLNIGHLDENGIYTGQFTTFALSGFVRAQGDADSGIDRLWQKKKVELGQ 81


>tr|A9NJY4|A9NJY4_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=4 SV=1
Length = 81

Score = 100 bits (250), Expect = 3e-20
Identities = 46/55 (83%), Positives = 51/55 (92%)
Frame = +3

Query: 3 KDHASVQLNIGHLDENGLYTCQFTTFALSGFVRAQGDADSAFDRLWQKQRAKIGQ 167
KDHASVQLNIGHLDENG+YT QFTTFALSGFVRAQGDADS DRLWQK++ ++GQ
Sbjct: 27 KDHASVQLNIGHLDENGIYTGQFTTFALSGFVRAQGDADSGIDRLWQKKKVELGQ 81


>tr|Q7Y199|Q7Y199_ORYSJ 40S subunit ribosomal protein OS=Oryza
sativa subsp. japonica GN=OSJNBa0039O18.25 PE=4 SV=1
Length = 82

Score = 97.8 bits (242), Expect = 2e-19
Identities = 44/56 (78%), Positives = 52/56 (92%)
Frame = +3

Query: 3 KDHASVQLNIGHLDENGLYTCQFTTFALSGFVRAQGDADSAFDRLWQKQRAKIGQQ 170
KDHASVQ+NIGH+DENGLY +FTTFALSGF+RAQGDADSA DRLWQK++A++ QQ
Sbjct: 27 KDHASVQINIGHVDENGLYDGRFTTFALSGFIRAQGDADSALDRLWQKRKAEVKQQ 82


>tr|Q10LK3|Q10LK3_ORYSJ Os03g0345200 protein OS=Oryza sativa subsp.
japonica GN=Os03g0345200 PE=4 SV=1
Length = 82

Score = 97.8 bits (242), Expect = 2e-19
Identities = 44/56 (78%), Positives = 52/56 (92%)
Frame = +3

Query: 3 KDHASVQLNIGHLDENGLYTCQFTTFALSGFVRAQGDADSAFDRLWQKQRAKIGQQ 170
KDHASVQ+NIGH+DENGLY +FTTFALSGF+RAQGDADSA DRLWQK++A++ QQ
Sbjct: 27 KDHASVQINIGHVDENGLYDGRFTTFALSGFIRAQGDADSALDRLWQKRKAEVKQQ 82


>tr|B8APE8|B8APE8_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_11539 PE=4 SV=1
Length = 123

Score = 97.8 bits (242), Expect = 2e-19
Identities = 44/56 (78%), Positives = 52/56 (92%)
Frame = +3

Query: 3 KDHASVQLNIGHLDENGLYTCQFTTFALSGFVRAQGDADSAFDRLWQKQRAKIGQQ 170
KDHASVQ+NIGH+DENGLY +FTTFALSGF+RAQGDADSA DRLWQK++A++ QQ
Sbjct: 68 KDHASVQINIGHVDENGLYDGRFTTFALSGFIRAQGDADSALDRLWQKRKAEVKQQ 123


>tr|A5B0Z2|A5B0Z2_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_033219 PE=4 SV=1
Length = 82

Score = 97.1 bits (240), Expect = 4e-19
Identities = 44/56 (78%), Positives = 51/56 (91%)
Frame = +3

Query: 3 KDHASVQLNIGHLDENGLYTCQFTTFALSGFVRAQGDADSAFDRLWQKQRAKIGQQ 170
KDHASVQ+N+GHLDE+G YT QFTTFAL GFVRAQGDADSA DRLWQK++A++ QQ
Sbjct: 27 KDHASVQINVGHLDESGTYTGQFTTFALCGFVRAQGDADSALDRLWQKKKAEVRQQ 82


>tr|A9TQC7|A9TQC7_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_108579 PE=4 SV=1
Length = 81

Score = 95.9 bits (237), Expect = 9e-19
Identities = 44/55 (80%), Positives = 51/55 (92%)
Frame = +3

Query: 3 KDHASVQLNIGHLDENGLYTCQFTTFALSGFVRAQGDADSAFDRLWQKQRAKIGQ 167
KD ASVQLN+GH+DENG+YT QFTTFAL GFVRAQGDADSAFDRLW K++A++GQ
Sbjct: 27 KDVASVQLNVGHVDENGVYTGQFTTFALCGFVRAQGDADSAFDRLWAKKKAELGQ 81


>tr|Q8LCB7|Q8LCB7_ARATH 40S ribosomal protein S21 homolog
OS=Arabidopsis thaliana PE=4 SV=1
Length = 82

Score = 94.7 bits (234), Expect = 2e-18
Identities = 45/56 (80%), Positives = 48/56 (85%)
Frame = +3

Query: 3 KDHASVQLNIGHLDENGLYTCQFTTFALSGFVRAQGDADSAFDRLWQKQRAKIGQQ 170
KDHASVQLNIGHLD NGLYT QFTTFAL GFVRAQGDADS DRLWQK++ + QQ
Sbjct: 27 KDHASVQLNIGHLDANGLYTGQFTTFALCGFVRAQGDADSGVDRLWQKKKVEAKQQ 82


>tr|A9RI12|A9RI12_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_55336 PE=4 SV=1
Length = 81

Score = 94.7 bits (234), Expect = 2e-18
Identities = 44/55 (80%), Positives = 50/55 (90%)
Frame = +3

Query: 3 KDHASVQLNIGHLDENGLYTCQFTTFALSGFVRAQGDADSAFDRLWQKQRAKIGQ 167
KD ASVQLN+GHLDENG+YT QFTTFAL GFVRAQGDADSA DRLW K++A++GQ
Sbjct: 27 KDVASVQLNVGHLDENGVYTGQFTTFALCGFVRAQGDADSALDRLWAKKKAELGQ 81


>tr|Q60DM0|Q60DM0_ORYSJ Os03g0667800 protein OS=Oryza sativa subsp.
japonica GN=OSJNBb0036M02.11 PE=4 SV=1
Length = 119

Score = 94.4 bits (233), Expect = 3e-18
Identities = 42/53 (79%), Positives = 50/53 (94%)
Frame = +3

Query: 3 KDHASVQLNIGHLDENGLYTCQFTTFALSGFVRAQGDADSAFDRLWQKQRAKI 161
KDHASVQ+NIGH+DENGLY +FTTFALSGF+RAQGDADSA DRLWQK++A++
Sbjct: 27 KDHASVQINIGHVDENGLYDGRFTTFALSGFIRAQGDADSALDRLWQKRKAEL 79