| DK946613 |
| Clone id |
YMU02A01NGRL0013_C20 |
| Library |
YMU02 |
| Length |
385 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0013_C20. 5' end sequence. |
| Accession |
DK946613 |
| Tissue type |
young leaves |
| Developmental stage |
sporophyte |
| Contig ID |
CL571Contig1 |
| Sequence |
GGGTTGATAACTGCGAAGGATCATGCTTCAGTGCAGTTGAACATTGGGCATTTGGATGAA AATGGCCTTTACACTTGCCAATTTACCACATTTGCCTTGTCTGGGTTTGTCCGAGCGCAG GGGGATGCAGATAGTGCTTTTGATCGGCTTTGGCAGAAACAGAGGGCAAAAATTGGCCAG CAGCTGTAGTGGGCAAGCTCTTAACTCTTTATTAATGTTTTGTTTCCATGAGTAAAAGGA TTTTAGATTTTAATGACTTTTCAAGCTGCGCTTGGAAAGCTCTTAGTCTGTGAACAAGGT TTGAATTCGATGAGACTCTACTCGTGAGAACTTTCTCTAATTGAAAAGGCTTTTTAAAAA AAAAAAAAAAAAAAAAAAAAAAAAA |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
P35687 |
| Definition |
sp|P35687|RS21_ORYSJ 40S ribosomal protein S21 OS=Oryza sativa subsp. japonica |
| Align length |
56 |
| Score (bit) |
97.8 |
| E-value |
1.0e-20 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9NY16 |
| Definition |
tr|A9NY16|A9NY16_PICSI Putative uncharacterized protein OS=Picea sitchensis |
| Align length |
55 |
| Score (bit) |
100.0 |
| E-value |
3.0e-20 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK946613|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0013_C20, 5' (342 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NY16|A9NY16_PICSI Putative uncharacterized protein OS=Picea... 100 3e-20 tr|A9NJY4|A9NJY4_PICSI Putative uncharacterized protein OS=Picea... 100 3e-20 tr|Q7Y199|Q7Y199_ORYSJ 40S subunit ribosomal protein OS=Oryza sa... 98 2e-19 tr|Q10LK3|Q10LK3_ORYSJ Os03g0345200 protein OS=Oryza sativa subs... 98 2e-19 tr|B8APE8|B8APE8_ORYSI Putative uncharacterized protein OS=Oryza... 98 2e-19 tr|A5B0Z2|A5B0Z2_VITVI Putative uncharacterized protein OS=Vitis... 97 4e-19 tr|A9TQC7|A9TQC7_PHYPA Predicted protein OS=Physcomitrella paten... 96 9e-19 tr|Q8LCB7|Q8LCB7_ARATH 40S ribosomal protein S21 homolog OS=Arab... 95 2e-18 tr|A9RI12|A9RI12_PHYPA Predicted protein OS=Physcomitrella paten... 95 2e-18 tr|Q60DM0|Q60DM0_ORYSJ Os03g0667800 protein OS=Oryza sativa subs... 94 3e-18 tr|B8AP26|B8AP26_ORYSI Putative uncharacterized protein OS=Oryza... 94 3e-18 tr|B6TXC9|B6TXC9_MAIZE 40S ribosomal protein S21 OS=Zea mays PE=... 94 3e-18 tr|A9TSH2|A9TSH2_PHYPA Predicted protein OS=Physcomitrella paten... 94 4e-18 tr|A9SFC5|A9SFC5_PHYPA Predicted protein (Fragment) OS=Physcomit... 94 4e-18 tr|B6SPN3|B6SPN3_MAIZE 40S ribosomal protein S21 OS=Zea mays PE=... 93 6e-18 tr|B6SH48|B6SH48_MAIZE 40S ribosomal protein S21 OS=Zea mays PE=... 93 6e-18 tr|A9PC55|A9PC55_POPTR Putative uncharacterized protein OS=Popul... 92 1e-17 tr|A9PC23|A9PC23_POPTR Putative uncharacterized protein OS=Popul... 92 1e-17 tr|B4FDE3|B4FDE3_MAIZE 40S ribosomal protein S21 OS=Zea mays PE=... 92 2e-17 tr|A5BUA6|A5BUA6_VITVI Putative uncharacterized protein (Chromos... 92 2e-17 tr|Q2HVJ1|Q2HVJ1_MEDTR Ribosomal protein S21e OS=Medicago trunca... 90 6e-17 tr|P93626|P93626_MAIZE 40S ribosomal subunit protein S21 OS=Zea ... 88 2e-16 tr|B7FGU9|B7FGU9_MEDTR Putative uncharacterized protein OS=Medic... 87 5e-16 tr|A4S8E0|A4S8E0_OSTLU Ribosomal protein S21, component of cytos... 77 4e-13 tr|A8IXG3|A8IXG3_CHLRE Ribosomal protein S21 OS=Chlamydomonas re... 75 2e-12 tr|A9NU05|A9NU05_PICSI Putative uncharacterized protein OS=Picea... 70 4e-11 tr|A7Q4R9|A7Q4R9_VITVI Chromosome chr10 scaffold_50, whole genom... 65 1e-09 tr|Q10LK2|Q10LK2_ORYSJ 40S ribosomal protein S21, putative, expr... 65 2e-09 tr|A3E3H7|A3E3H7_PFIPI 40S ribosomal protein OS=Pfiesteria pisci... 64 3e-09 tr|B6HC25|B6HC25_PENCH Pc18g05330 protein OS=Penicillium chrysog... 62 1e-08
>tr|A9NY16|A9NY16_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1 Length = 81
Score = 100 bits (250), Expect = 3e-20 Identities = 46/55 (83%), Positives = 51/55 (92%) Frame = +3
Query: 3 KDHASVQLNIGHLDENGLYTCQFTTFALSGFVRAQGDADSAFDRLWQKQRAKIGQ 167 KDHASVQLNIGHLDENG+YT QFTTFALSGFVRAQGDADS DRLWQK++ ++GQ Sbjct: 27 KDHASVQLNIGHLDENGIYTGQFTTFALSGFVRAQGDADSGIDRLWQKKKVELGQ 81
>tr|A9NJY4|A9NJY4_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1 Length = 81
Score = 100 bits (250), Expect = 3e-20 Identities = 46/55 (83%), Positives = 51/55 (92%) Frame = +3
Query: 3 KDHASVQLNIGHLDENGLYTCQFTTFALSGFVRAQGDADSAFDRLWQKQRAKIGQ 167 KDHASVQLNIGHLDENG+YT QFTTFALSGFVRAQGDADS DRLWQK++ ++GQ Sbjct: 27 KDHASVQLNIGHLDENGIYTGQFTTFALSGFVRAQGDADSGIDRLWQKKKVELGQ 81
>tr|Q7Y199|Q7Y199_ORYSJ 40S subunit ribosomal protein OS=Oryza sativa subsp. japonica GN=OSJNBa0039O18.25 PE=4 SV=1 Length = 82
Score = 97.8 bits (242), Expect = 2e-19 Identities = 44/56 (78%), Positives = 52/56 (92%) Frame = +3
Query: 3 KDHASVQLNIGHLDENGLYTCQFTTFALSGFVRAQGDADSAFDRLWQKQRAKIGQQ 170 KDHASVQ+NIGH+DENGLY +FTTFALSGF+RAQGDADSA DRLWQK++A++ QQ Sbjct: 27 KDHASVQINIGHVDENGLYDGRFTTFALSGFIRAQGDADSALDRLWQKRKAEVKQQ 82
>tr|Q10LK3|Q10LK3_ORYSJ Os03g0345200 protein OS=Oryza sativa subsp. japonica GN=Os03g0345200 PE=4 SV=1 Length = 82
Score = 97.8 bits (242), Expect = 2e-19 Identities = 44/56 (78%), Positives = 52/56 (92%) Frame = +3
Query: 3 KDHASVQLNIGHLDENGLYTCQFTTFALSGFVRAQGDADSAFDRLWQKQRAKIGQQ 170 KDHASVQ+NIGH+DENGLY +FTTFALSGF+RAQGDADSA DRLWQK++A++ QQ Sbjct: 27 KDHASVQINIGHVDENGLYDGRFTTFALSGFIRAQGDADSALDRLWQKRKAEVKQQ 82
>tr|B8APE8|B8APE8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_11539 PE=4 SV=1 Length = 123
Score = 97.8 bits (242), Expect = 2e-19 Identities = 44/56 (78%), Positives = 52/56 (92%) Frame = +3
Query: 3 KDHASVQLNIGHLDENGLYTCQFTTFALSGFVRAQGDADSAFDRLWQKQRAKIGQQ 170 KDHASVQ+NIGH+DENGLY +FTTFALSGF+RAQGDADSA DRLWQK++A++ QQ Sbjct: 68 KDHASVQINIGHVDENGLYDGRFTTFALSGFIRAQGDADSALDRLWQKRKAEVKQQ 123
>tr|A5B0Z2|A5B0Z2_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033219 PE=4 SV=1 Length = 82
Score = 97.1 bits (240), Expect = 4e-19 Identities = 44/56 (78%), Positives = 51/56 (91%) Frame = +3
Query: 3 KDHASVQLNIGHLDENGLYTCQFTTFALSGFVRAQGDADSAFDRLWQKQRAKIGQQ 170 KDHASVQ+N+GHLDE+G YT QFTTFAL GFVRAQGDADSA DRLWQK++A++ QQ Sbjct: 27 KDHASVQINVGHLDESGTYTGQFTTFALCGFVRAQGDADSALDRLWQKKKAEVRQQ 82
>tr|A9TQC7|A9TQC7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_108579 PE=4 SV=1 Length = 81
Score = 95.9 bits (237), Expect = 9e-19 Identities = 44/55 (80%), Positives = 51/55 (92%) Frame = +3
Query: 3 KDHASVQLNIGHLDENGLYTCQFTTFALSGFVRAQGDADSAFDRLWQKQRAKIGQ 167 KD ASVQLN+GH+DENG+YT QFTTFAL GFVRAQGDADSAFDRLW K++A++GQ Sbjct: 27 KDVASVQLNVGHVDENGVYTGQFTTFALCGFVRAQGDADSAFDRLWAKKKAELGQ 81
>tr|Q8LCB7|Q8LCB7_ARATH 40S ribosomal protein S21 homolog OS=Arabidopsis thaliana PE=4 SV=1 Length = 82
Score = 94.7 bits (234), Expect = 2e-18 Identities = 45/56 (80%), Positives = 48/56 (85%) Frame = +3
Query: 3 KDHASVQLNIGHLDENGLYTCQFTTFALSGFVRAQGDADSAFDRLWQKQRAKIGQQ 170 KDHASVQLNIGHLD NGLYT QFTTFAL GFVRAQGDADS DRLWQK++ + QQ Sbjct: 27 KDHASVQLNIGHLDANGLYTGQFTTFALCGFVRAQGDADSGVDRLWQKKKVEAKQQ 82
>tr|A9RI12|A9RI12_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_55336 PE=4 SV=1 Length = 81
Score = 94.7 bits (234), Expect = 2e-18 Identities = 44/55 (80%), Positives = 50/55 (90%) Frame = +3
Query: 3 KDHASVQLNIGHLDENGLYTCQFTTFALSGFVRAQGDADSAFDRLWQKQRAKIGQ 167 KD ASVQLN+GHLDENG+YT QFTTFAL GFVRAQGDADSA DRLW K++A++GQ Sbjct: 27 KDVASVQLNVGHLDENGVYTGQFTTFALCGFVRAQGDADSALDRLWAKKKAELGQ 81
>tr|Q60DM0|Q60DM0_ORYSJ Os03g0667800 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0036M02.11 PE=4 SV=1 Length = 119
Score = 94.4 bits (233), Expect = 3e-18 Identities = 42/53 (79%), Positives = 50/53 (94%) Frame = +3
Query: 3 KDHASVQLNIGHLDENGLYTCQFTTFALSGFVRAQGDADSAFDRLWQKQRAKI 161 KDHASVQ+NIGH+DENGLY +FTTFALSGF+RAQGDADSA DRLWQK++A++ Sbjct: 27 KDHASVQINIGHVDENGLYDGRFTTFALSGFIRAQGDADSALDRLWQKRKAEL 79
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