| DK946624 |
| Clone id |
YMU02A01NGRL0013_D10 |
| Library |
YMU02 |
| Length |
539 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0013_D10. 5' end sequence. |
| Accession |
DK946624 |
| Tissue type |
young leaves |
| Developmental stage |
sporophyte |
| Contig ID |
CL443Contig1 |
| Sequence |
GGAATCTCTTTCGCTCTTTCCGAACGTGAGAATGGGGCAGCCATTACCTGACAGTTCAAG GGGATCCACGTCATTGGCAGCATCGGAAGAGGCAAAGCAGGCCGCTTGCTGCAATGGCAA CACGTCCAACACTTCTTCTGTGCAGCATGTGTTTGTGTACGGTAACTCCAGGCCTGACAT CAGCCCCCCTCTTTCTGGCGAAGCGGTGCAAGCCAGGCGCGCCTGGCTTCTTGGAGGTCG TCTTTACTCCTGCAATGTAGTGACAGAGGGAGGAGAACGAGTGCAATCCTATGTTTACCA TTGCCAAGAAGTTGATCTATCAAATCCTGTGCATGGTGGGGATTGGCTGCAACATGTACA ACACTAGGCAGCCATGCGAGTATGATGTAAACTTGCTCGAGTAGCACTGTTTCTCTATTG TGCTATAGGGAACCTTCGAAGCTGAATTTGAGTTGTTAAAACTGCACTTAATATAATCAG GGACAAAACTGTATATTATTTGTACAATTATCTGACTAAAGAGTGTCTGAAAAAAAAAA |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
P0AC87 |
| Definition |
sp|P0AC87|PHSG_SHIFL Glycogen phosphorylase OS=Shigella flexneri |
| Align length |
65 |
| Score (bit) |
32.3 |
| E-value |
1.4 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9P198 |
| Definition |
tr|A9P198|A9P198_PICSI Putative uncharacterized protein OS=Picea sitchensis |
| Align length |
177 |
| Score (bit) |
55.1 |
| E-value |
2.0e-06 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK946624|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0013_D10, 5' (529 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9P198|A9P198_PICSI Putative uncharacterized protein OS=Picea... 55 2e-06 tr|Q4D804|Q4D804_TRYCR Putative uncharacterized protein OS=Trypa... 37 0.61 tr|A8GLC9|A8GLC9_SERP5 Lipopolysaccharide heptosyltransferase II... 37 0.81 tr|B4VBE3|B4VBE3_9ACTO Ricin B lectin (Fragment) OS=Streptomyces... 37 0.81 tr|B4F131|B4F131_PROMH ADP-heptose--LPS heptosyltransferase II O... 36 1.1 tr|A1JHX5|A1JHX5_YERE8 ADP-heptose--LPS heptosyltransferase II O... 36 1.1 tr|B2VL46|B2VL46_ERWT9 ADP-heptose--lps heptosyltransferase II O... 36 1.4 tr|Q2NQV6|Q2NQV6_SODGM Lipopolysaccharide heptosyltransferase II... 35 3.1 tr|A2R8D2|A2R8D2_ASPNC Function: C. carbonum HTS is a multifunct... 34 4.0 tr|A9I9A0|A9I9A0_BORPD Putative membrane protein OS=Bordetella p... 34 5.2 tr|Q894Z5|Q894Z5_CLOTE Flavoprotein OS=Clostridium tetani GN=CTC... 34 5.3 tr|Q66GC8|Q66GC8_YERPS ADP-heptose--LPS heptosyltransferase II O... 34 5.3 tr|Q1CD10|Q1CD10_YERPN ADP-heptose--LPS heptosyltransferase II O... 34 5.3 tr|Q1C275|Q1C275_YERPA ADP-heptose--LPS heptosyltransferase II O... 34 5.3 tr|Q0WKN5|Q0WKN5_YERPE ADP-heptose--LPS heptosyltransferase II O... 34 5.3 tr|B2JYP1|B2JYP1_YERPB Lipopolysaccharide heptosyltransferase II... 34 5.3 tr|B1JQW5|B1JQW5_YERPY Lipopolysaccharide heptosyltransferase II... 34 5.3 tr|A9R682|A9R682_YERPG Lipopolysaccharide heptosyltransferase II... 34 5.3 tr|A7FCU2|A7FCU2_YERP3 Lipopolysaccharide heptosyltransferase II... 34 5.3 tr|A4TSC9|A4TSC9_YERPP ADP-heptose--LPS heptosyltransferase II O... 34 5.3 tr|Q8D1S4|Q8D1S4_YERPE ADP-heptose--lps heptosyltransferase II O... 34 5.3 tr|B7BNG6|B7BNG6_9CLOT Putative uncharacterized protein OS=Clost... 34 5.3 tr|B2PV99|B2PV99_PROST Putative uncharacterized protein OS=Provi... 34 5.3 tr|B0HYY9|B0HYY9_YERPE Lipopolysaccharide heptosyltransferase II... 34 5.3 tr|B0HLD7|B0HLD7_YERPE Lipopolysaccharide heptosyltransferase II... 34 5.3 tr|B0HAF3|B0HAF3_YERPE Lipopolysaccharide heptosyltransferase II... 34 5.3 tr|B0GPK6|B0GPK6_YERPE Lipopolysaccharide heptosyltransferase II... 34 5.3 tr|B0GLC4|B0GLC4_YERPE Lipopolysaccharide heptosyltransferase II... 34 5.3 tr|A9ZYY3|A9ZYY3_YERPE Lipopolysaccharide heptosyltransferase II... 34 5.3 tr|A9Z468|A9Z468_YERPE Lipopolysaccharide heptosyltransferase II... 34 5.3
>tr|A9P198|A9P198_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 178
Score = 55.1 bits (131), Expect = 2e-06 Identities = 48/177 (27%), Positives = 70/177 (39%), Gaps = 70/177 (39%) Frame = +2
Query: 32 MGQPLPDSSRGSTSLAASEEAKQA-----ACCNGNTSNTSSVQ----------HVFVYGN 166 MG PL + S S++AS + A NGN+++++ V H+F+YG+ Sbjct: 1 MGIPLKNEESSSASISASSPVNHSSYHANASANGNSNSSNGVDSSHSSSGAPSHIFLYGD 60
Query: 167 SRPDI-SPPLSGEAVQARRAWLLGGRLYSCNV---------VTEGGERV----------- 283 SRPD S + +Q +RAWLLG RLYS + + E G V Sbjct: 61 SRPDAPSNTQNLPGLQNKRAWLLGSRLYSFSTGGVRRAAVKLEESGHAVLGYAVSTNDSM 120
Query: 284 ----------------------------------QSYVYHCQEVDLSNPVHGGDWLQ 352 QSY+YH +V+ SN + GDWL+ Sbjct: 121 GITRLLDEFERREYLPDLYERDIVEVISERGERLQSYIYHRPDVNPSNLIPTGDWLR 177
>tr|Q4D804|Q4D804_TRYCR Putative uncharacterized protein OS=Trypanosoma cruzi GN=Tc00.1047053508149.65 PE=4 SV=1 Length = 253
Score = 37.0 bits (84), Expect = 0.61 Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Frame = -3
Query: 266 LSLHCRSKDDLQEARRAWLAPLRQK--EGG*CQAWSYRTQTHAAQKKCWTCCHCSKRPAL 93 LS CR +D L + RRAW + Q GG ++ R Q + CW C C PA+ Sbjct: 172 LSRRCREQDVLTQPRRAWSVTMAQSAVAGG---IFTSRRQQRESCSCCWCRC-CLLWPAM 227
Query: 92 PLPMLPM 72 P+ + P+ Sbjct: 228 PIIVCPL 234
>tr|A8GLC9|A8GLC9_SERP5 Lipopolysaccharide heptosyltransferase II OS=Serratia proteamaculans (strain 568) GN=Spro_4826 PE=4 SV=1 Length = 348
Score = 36.6 bits (83), Expect = 0.81 Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 14/68 (20%) Frame = +2
Query: 44 LPDSSRG-STSLAASEEAKQA----ACCNGNTSNTSSVQHVF---------VYGNSRPDI 181 L D SRG +LA + +QA A C+ SN S + HV +YG S PD Sbjct: 235 LDDDSRGFCMNLAGETQLEQAVILLASCSAVVSNDSGLMHVAAALNKPLIALYGPSSPDF 294
Query: 182 SPPLSGEA 205 +PPLS +A Sbjct: 295 TPPLSDKA 302
>tr|B4VBE3|B4VBE3_9ACTO Ricin B lectin (Fragment) OS=Streptomyces sp. Mg1 GN=SSAG_05071 PE=4 SV=1 Length = 398
Score = 36.6 bits (83), Expect = 0.81 Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 1/86 (1%) Frame = +2
Query: 41 PLPDSSRGSTSLAASEEAKQAACCNGNTSNTSSVQHVFVYGNSRPDISPPLSGEAVQARR 220 P P ++ GS +AA A Q C+G+ S + VQ V+V+G+ R + E V + R Sbjct: 92 PAPAAASGSQGVAAGP-AGQTVQCDGDGSTGNRVQVVYVHGSDRDRYA-----EYVASFR 145
Query: 221 AWLLGGRL-YSCNVVTEGGERVQSYV 295 W L YS + GG R YV Sbjct: 146 KWAADADLIYSASAKETGGVRHIRYV 171
>tr|B4F131|B4F131_PROMH ADP-heptose--LPS heptosyltransferase II OS=Proteus mirabilis (strain HI4320) GN=waaF PE=4 SV=1 Length = 350
Score = 36.2 bits (82), Expect = 1.1 Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 13/66 (19%) Frame = +2
Query: 47 PDSSRGSTSLAASEEAKQA----ACCNGNTSNTSSVQHVF---------VYGNSRPDISP 187 PD+ +LA +QA A C SN S + HV +YG S PD +P Sbjct: 238 PDAQAACINLAGETSLEQAVNLIAACKAVVSNDSGLMHVAAALERPLVALYGPSSPDFTP 297
Query: 188 PLSGEA 205 PLS +A Sbjct: 298 PLSDKA 303
>tr|A1JHX5|A1JHX5_YERE8 ADP-heptose--LPS heptosyltransferase II OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=rfaF PE=4 SV=1 Length = 354
Score = 36.2 bits (82), Expect = 1.1 Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 16/76 (21%) Frame = +2
Query: 38 QPLPDSSR-------GSTSLAASEEAKQAACCNGNTSNTSSVQHVF---------VYGNS 169 Q L +S+R G TSL + A CN SN S + HV +YG S Sbjct: 233 QALDESAREYCLNLAGQTSL--DQAVVMIAACNAVVSNDSGLMHVAAALNKPLVALYGPS 290
Query: 170 RPDISPPLSGEAVQAR 217 PD +PPLS +A R Sbjct: 291 SPDFTPPLSDKATVIR 306
>tr|B2VL46|B2VL46_ERWT9 ADP-heptose--lps heptosyltransferase II OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=waaF PE=4 SV=1 Length = 348
Score = 35.8 bits (81), Expect = 1.4 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 13/58 (22%) Frame = +2
Query: 71 SLAASEEAKQA----ACCNGNTSNTSSVQHVF---------VYGNSRPDISPPLSGEA 205 +LA + +QA ACC+ SN S + H+ +YG S PD +PPLS +A Sbjct: 245 NLAGETQLEQAVILLACCHAIVSNDSGLMHIAAALDRPLIALYGPSSPDFTPPLSEKA 302
>tr|Q2NQV6|Q2NQV6_SODGM Lipopolysaccharide heptosyltransferase II OS=Sodalis glossinidius (strain morsitans) GN=SG2194 PE=4 SV=1 Length = 349
Score = 34.7 bits (78), Expect = 3.1 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 9/57 (15%) Frame = +2
Query: 62 GSTSLAASEEAKQAACCNGNTSNTSSVQHVF---------VYGNSRPDISPPLSGEA 205 G TSL + A C G SN S + HV +YG S PD +PPLS +A Sbjct: 248 GQTSL--EQAVTLIAACQGIVSNDSGLMHVASALDRPLVALYGPSSPDFTPPLSHQA 302
>tr|A2R8D2|A2R8D2_ASPNC Function: C. carbonum HTS is a multifunctional peptide synthase OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=An16g06720 PE=3 SV=1 Length = 7035
Score = 34.3 bits (77), Expect = 4.0 Identities = 39/116 (33%), Positives = 58/116 (50%), Gaps = 7/116 (6%) Frame = +2
Query: 2 ESLSLFPNVRMGQPL--PDSSR--GSTSLAASEEAKQAACCNGN--TSNTSSVQHVFVYG 163 ES+ +F NV M QPL PD R +T+L SEE A N ++ S + + Sbjct: 6904 ESIIVFCNV-MDQPLLSPDEIRYLRTTTLLPSEEPLSATPTNEQLMVASISPTEMQWALE 6962
Query: 164 NSRPD-ISPPLSGEAVQARRAWLLGGRLYSCNVVTEGGERVQSYVYHCQEVDLSNP 328 ++ D + PLS E + + LGG L S ++++ ER Q YV ++V L NP Sbjct: 6963 SAWKDTFNCPLSPEVKAGKTIFDLGGDLISASLISAHMER-QGYVLSVEDV-LGNP 7016
>tr|A9I9A0|A9I9A0_BORPD Putative membrane protein OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=Bpet1012 PE=4 SV=1 Length = 214
Score = 33.9 bits (76), Expect = 5.2 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = -3
Query: 218 AWLAPLRQKEGG*CQAWSYRTQTHAAQKKCWTCC 117 AWL L G QAW+ RT + A ++CW C Sbjct: 166 AWLIALPLLLAGATQAWAVRTHSEPASQRCWGSC 199
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