DK946624
Clone id YMU02A01NGRL0013_D10
Library
Length 539
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0013_D10. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GGAATCTCTTTCGCTCTTTCCGAACGTGAGAATGGGGCAGCCATTACCTGACAGTTCAAG
GGGATCCACGTCATTGGCAGCATCGGAAGAGGCAAAGCAGGCCGCTTGCTGCAATGGCAA
CACGTCCAACACTTCTTCTGTGCAGCATGTGTTTGTGTACGGTAACTCCAGGCCTGACAT
CAGCCCCCCTCTTTCTGGCGAAGCGGTGCAAGCCAGGCGCGCCTGGCTTCTTGGAGGTCG
TCTTTACTCCTGCAATGTAGTGACAGAGGGAGGAGAACGAGTGCAATCCTATGTTTACCA
TTGCCAAGAAGTTGATCTATCAAATCCTGTGCATGGTGGGGATTGGCTGCAACATGTACA
ACACTAGGCAGCCATGCGAGTATGATGTAAACTTGCTCGAGTAGCACTGTTTCTCTATTG
TGCTATAGGGAACCTTCGAAGCTGAATTTGAGTTGTTAAAACTGCACTTAATATAATCAG
GGACAAAACTGTATATTATTTGTACAATTATCTGACTAAAGAGTGTCTGAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P0AC87
Definition sp|P0AC87|PHSG_SHIFL Glycogen phosphorylase OS=Shigella flexneri
Align length 65
Score (bit) 32.3
E-value 1.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946624|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0013_D10, 5'
(529 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P0AC87|PHSG_SHIFL Glycogen phosphorylase OS=Shigella flexneri... 32 1.4
sp|P0AC86|PHSG_ECOLI Glycogen phosphorylase OS=Escherichia coli ... 32 1.4
sp|Q3THG9|AASD1_MOUSE Alanyl-tRNA synthetase domain-containing p... 32 1.4
sp|Q5XI97|AASD1_RAT Alanyl-tRNA synthetase domain-containing pro... 32 2.5
sp|Q32LK1|AASD1_BOVIN Alanyl-tRNA synthetase domain-containing p... 32 2.5
sp|Q0KL02|TRIO_MOUSE Triple functional domain protein OS=Mus mus... 31 3.2
sp|P37421|RFAF_SALTY ADP-heptose--LPS heptosyltransferase 2 OS=S... 31 3.2
sp|Q9FIX2|AIG2L_ARATH AIG2-like protein OS=Arabidopsis thaliana ... 31 4.2
sp|Q7WE96|SELU_BORBR tRNA 2-selenouridine synthase OS=Bordetella... 30 5.4
sp|Q82676|REP_ICMV Replication-associated protein OS=Indian cass... 30 5.4
sp|P67084|Y2172_MYCBO UPF0001 protein Mb2172c OS=Mycobacterium b... 30 5.5
sp|P67083|Y2148_MYCTU UPF0001 protein Rv2148c/MT2207 OS=Mycobact... 30 5.5
sp|Q12224|RLM1_YEAST Transcription factor RLM1 OS=Saccharomyces ... 30 5.5
sp|P37692|RFAF_ECOLI ADP-heptose--LPS heptosyltransferase 2 OS=E... 30 5.5
sp|Q9BTE6|AASD1_HUMAN Alanyl-tRNA synthetase domain-containing p... 30 5.5
sp|Q5R8N4|CP062_PONAB UPF0505 protein C16orf62 homolog OS=Pongo ... 30 7.2
sp|Q7Z3J2|CP062_HUMAN UPF0505 protein C16orf62 OS=Homo sapiens G... 30 7.2
sp|A6LTP1|SYD_CLOB8 Aspartyl-tRNA synthetase OS=Clostridium beij... 30 9.4
sp|Q28Q60|ISPDF_JANSC Bifunctional enzyme ispD/ispF OS=Jannaschi... 30 9.4
sp|O95256|I18RA_HUMAN Interleukin-18 receptor accessory protein ... 30 9.4
sp|Q89AB3|EX5B_BUCBP Exodeoxyribonuclease V beta chain OS=Buchne... 30 9.4

>sp|P0AC87|PHSG_SHIFL Glycogen phosphorylase OS=Shigella flexneri
GN=glgP PE=3 SV=1
Length = 815

Score = 32.3 bits (72), Expect = 1.4
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = -3

Query: 398 EQVYIILAWLPSVVHVAANPHHAQDLIDQLLGNGKHRIALVLLPLSLHCRSK-DDLQEAR 222
E+++ +L + S V +P +DL+D L+ G H L + C+ K D+L E +
Sbjct: 718 EELHQVLTQIGSGVFSPEDPGRYRDLVDSLINFGDHYQVLADYRSYVDCQDKVDELYELQ 777

Query: 221 RAWLA 207
W A
Sbjct: 778 EEWTA 782


>sp|P0AC86|PHSG_ECOLI Glycogen phosphorylase OS=Escherichia coli
(strain K12) GN=glgP PE=3 SV=1
Length = 815

Score = 32.3 bits (72), Expect = 1.4
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = -3

Query: 398 EQVYIILAWLPSVVHVAANPHHAQDLIDQLLGNGKHRIALVLLPLSLHCRSK-DDLQEAR 222
E+++ +L + S V +P +DL+D L+ G H L + C+ K D+L E +
Sbjct: 718 EELHQVLTQIGSGVFSPEDPGRYRDLVDSLINFGDHYQVLADYRSYVDCQDKVDELYELQ 777

Query: 221 RAWLA 207
W A
Sbjct: 778 EEWTA 782


>sp|Q3THG9|AASD1_MOUSE Alanyl-tRNA synthetase domain-containing
protein 1 OS=Mus musculus GN=Aarsd1 PE=1 SV=2
Length = 412

Score = 32.3 bits (72), Expect = 1.4
Identities = 20/90 (22%), Positives = 36/90 (40%)
Frame = +2

Query: 35 GQPLPDSSRGSTSLAASEEAKQAACCNGNTSNTSSVQHVFVYGNSRPDISPPLSGEAVQA 214
G+ LPD G + E CC + SN S +Q + + G + G+ ++
Sbjct: 185 GRGLPDDHAGPIRVVTIEGVDSNMCCGTHVSNLSDLQVIKILGTEK--------GKKNKS 236

Query: 215 RRAWLLGGRLYSCNVVTEGGERVQSYVYHC 304
+L G R+ + G E+ + + C
Sbjct: 237 NLIFLAGNRVLKWMERSHGSEKALTSLLKC 266


>sp|Q5XI97|AASD1_RAT Alanyl-tRNA synthetase domain-containing
protein 1 OS=Rattus norvegicus GN=Aarsd1 PE=2 SV=1
Length = 412

Score = 31.6 bits (70), Expect = 2.5
Identities = 20/94 (21%), Positives = 37/94 (39%)
Frame = +2

Query: 35 GQPLPDSSRGSTSLAASEEAKQAACCNGNTSNTSSVQHVFVYGNSRPDISPPLSGEAVQA 214
G+ LPD G + E CC + +N S +Q + + G + G+ ++
Sbjct: 185 GRGLPDDHAGPIRVVTIEGVDSNMCCGTHVNNLSDLQVIKILGTEK--------GKKNKS 236

Query: 215 RRAWLLGGRLYSCNVVTEGGERVQSYVYHCQEVD 316
+L G R+ + G E+ + + C D
Sbjct: 237 NLIFLAGNRVLKWMERSHGSEKALTSLLKCGAED 270


>sp|Q32LK1|AASD1_BOVIN Alanyl-tRNA synthetase domain-containing
protein 1 OS=Bos taurus GN=AARSD1 PE=2 SV=1
Length = 444

Score = 31.6 bits (70), Expect = 2.5
Identities = 21/94 (22%), Positives = 36/94 (38%)
Frame = +2

Query: 35 GQPLPDSSRGSTSLAASEEAKQAACCNGNTSNTSSVQHVFVYGNSRPDISPPLSGEAVQA 214
G+ LPD G + E CC + SN S +Q + + G + G+ +
Sbjct: 185 GRGLPDDHAGPIRVVTIESVDSNMCCGTHVSNLSDLQVIKILGTEK--------GKKNKT 236

Query: 215 RRAWLLGGRLYSCNVVTEGGERVQSYVYHCQEVD 316
+L G R+ + G E+ + + C D
Sbjct: 237 NLIFLAGNRVLKWMERSHGIEKALTALLKCGAED 270


>sp|Q0KL02|TRIO_MOUSE Triple functional domain protein OS=Mus musculus
GN=Trio PE=1 SV=2
Length = 3043

Score = 31.2 bits (69), Expect = 3.2
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +2

Query: 29 RMGQPLPDSSRGSTSLAASEEAKQAACCNGNTSNTSSVQHVFV---YGNSRPDISPPLSG 199
R P D+ R ST +ASE++ Q+ NG S++S++ + V Y + D G
Sbjct: 2460 RHAAPSKDTDRMSTCSSASEQSVQSTQSNGEGSSSSNISTMLVTHEYTAVKEDEINVYQG 2519

Query: 200 EAVQ 211
E VQ
Sbjct: 2520 EVVQ 2523


>sp|P37421|RFAF_SALTY ADP-heptose--LPS heptosyltransferase 2
OS=Salmonella typhimurium GN=rfaF PE=3 SV=1
Length = 348

Score = 31.2 bits (69), Expect = 3.2
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 13/58 (22%)
Frame = +2

Query: 71 SLAASEEAKQA----ACCNGNTSNTSSVQHVF---------VYGNSRPDISPPLSGEA 205
+LA + +QA A C +N S + HV +YG S PD +PPLS +A
Sbjct: 245 NLAGETQLEQAVILIAACKAIVTNDSGLMHVAAALDRPLVALYGPSSPDFTPPLSHKA 302


>sp|Q9FIX2|AIG2L_ARATH AIG2-like protein OS=Arabidopsis thaliana
GN=At5g39720 PE=1 SV=1
Length = 165

Score = 30.8 bits (68), Expect = 4.2
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 8/60 (13%)
Frame = +2

Query: 122 TSNTSSVQHVFVYGNSR-PDI-------SPPLSGEAVQARRAWLLGGRLYSCNVVTEGGE 277
+S++ + +VFVYG+ + PD+ +P + + + + L GRLY C V +E GE
Sbjct: 3 SSDSLQLHNVFVYGSFQDPDVINVMLDRTPEIVSATLPGFQRFRLKGRLYPCIVPSEKGE 62


>sp|Q7WE96|SELU_BORBR tRNA 2-selenouridine synthase OS=Bordetella
bronchiseptica GN=selU PE=3 SV=1
Length = 368

Score = 30.4 bits (67), Expect = 5.4
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = -3

Query: 350 AANPHHAQDLIDQLLGNGKHRIALVLLPLSLHCRSKDDLQEARRAWLAPL 201
AA + D I + LG +HR L+ +L ++ D +A RAW+ PL
Sbjct: 278 AARLRQSLDNIARRLGGERHRRLAALMDEALARQAGDGSVDAHRAWIEPL 327


>sp|Q82676|REP_ICMV Replication-associated protein OS=Indian cassava
mosaic virus GN=AC1 PE=1 SV=1
Length = 351

Score = 30.4 bits (67), Expect = 5.4
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +3

Query: 42 HYLTVQGDPRHWQHRKRQSRPLAAMATRPTLLLCS 146
H+ + G P WQ + +P+ PT+ LC+
Sbjct: 269 HFKRIHGGPEDWQSNTKYGKPVQIKGGIPTIFLCN 303


tr_hit_id A9P198
Definition tr|A9P198|A9P198_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 177
Score (bit) 55.1
E-value 2.0e-06
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946624|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0013_D10, 5'
(529 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9P198|A9P198_PICSI Putative uncharacterized protein OS=Picea... 55 2e-06
tr|Q4D804|Q4D804_TRYCR Putative uncharacterized protein OS=Trypa... 37 0.61
tr|A8GLC9|A8GLC9_SERP5 Lipopolysaccharide heptosyltransferase II... 37 0.81
tr|B4VBE3|B4VBE3_9ACTO Ricin B lectin (Fragment) OS=Streptomyces... 37 0.81
tr|B4F131|B4F131_PROMH ADP-heptose--LPS heptosyltransferase II O... 36 1.1
tr|A1JHX5|A1JHX5_YERE8 ADP-heptose--LPS heptosyltransferase II O... 36 1.1
tr|B2VL46|B2VL46_ERWT9 ADP-heptose--lps heptosyltransferase II O... 36 1.4
tr|Q2NQV6|Q2NQV6_SODGM Lipopolysaccharide heptosyltransferase II... 35 3.1
tr|A2R8D2|A2R8D2_ASPNC Function: C. carbonum HTS is a multifunct... 34 4.0
tr|A9I9A0|A9I9A0_BORPD Putative membrane protein OS=Bordetella p... 34 5.2
tr|Q894Z5|Q894Z5_CLOTE Flavoprotein OS=Clostridium tetani GN=CTC... 34 5.3
tr|Q66GC8|Q66GC8_YERPS ADP-heptose--LPS heptosyltransferase II O... 34 5.3
tr|Q1CD10|Q1CD10_YERPN ADP-heptose--LPS heptosyltransferase II O... 34 5.3
tr|Q1C275|Q1C275_YERPA ADP-heptose--LPS heptosyltransferase II O... 34 5.3
tr|Q0WKN5|Q0WKN5_YERPE ADP-heptose--LPS heptosyltransferase II O... 34 5.3
tr|B2JYP1|B2JYP1_YERPB Lipopolysaccharide heptosyltransferase II... 34 5.3
tr|B1JQW5|B1JQW5_YERPY Lipopolysaccharide heptosyltransferase II... 34 5.3
tr|A9R682|A9R682_YERPG Lipopolysaccharide heptosyltransferase II... 34 5.3
tr|A7FCU2|A7FCU2_YERP3 Lipopolysaccharide heptosyltransferase II... 34 5.3
tr|A4TSC9|A4TSC9_YERPP ADP-heptose--LPS heptosyltransferase II O... 34 5.3
tr|Q8D1S4|Q8D1S4_YERPE ADP-heptose--lps heptosyltransferase II O... 34 5.3
tr|B7BNG6|B7BNG6_9CLOT Putative uncharacterized protein OS=Clost... 34 5.3
tr|B2PV99|B2PV99_PROST Putative uncharacterized protein OS=Provi... 34 5.3
tr|B0HYY9|B0HYY9_YERPE Lipopolysaccharide heptosyltransferase II... 34 5.3
tr|B0HLD7|B0HLD7_YERPE Lipopolysaccharide heptosyltransferase II... 34 5.3
tr|B0HAF3|B0HAF3_YERPE Lipopolysaccharide heptosyltransferase II... 34 5.3
tr|B0GPK6|B0GPK6_YERPE Lipopolysaccharide heptosyltransferase II... 34 5.3
tr|B0GLC4|B0GLC4_YERPE Lipopolysaccharide heptosyltransferase II... 34 5.3
tr|A9ZYY3|A9ZYY3_YERPE Lipopolysaccharide heptosyltransferase II... 34 5.3
tr|A9Z468|A9Z468_YERPE Lipopolysaccharide heptosyltransferase II... 34 5.3

>tr|A9P198|A9P198_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 178

Score = 55.1 bits (131), Expect = 2e-06
Identities = 48/177 (27%), Positives = 70/177 (39%), Gaps = 70/177 (39%)
Frame = +2

Query: 32 MGQPLPDSSRGSTSLAASEEAKQA-----ACCNGNTSNTSSVQ----------HVFVYGN 166
MG PL + S S++AS + A NGN+++++ V H+F+YG+
Sbjct: 1 MGIPLKNEESSSASISASSPVNHSSYHANASANGNSNSSNGVDSSHSSSGAPSHIFLYGD 60

Query: 167 SRPDI-SPPLSGEAVQARRAWLLGGRLYSCNV---------VTEGGERV----------- 283
SRPD S + +Q +RAWLLG RLYS + + E G V
Sbjct: 61 SRPDAPSNTQNLPGLQNKRAWLLGSRLYSFSTGGVRRAAVKLEESGHAVLGYAVSTNDSM 120

Query: 284 ----------------------------------QSYVYHCQEVDLSNPVHGGDWLQ 352
QSY+YH +V+ SN + GDWL+
Sbjct: 121 GITRLLDEFERREYLPDLYERDIVEVISERGERLQSYIYHRPDVNPSNLIPTGDWLR 177


>tr|Q4D804|Q4D804_TRYCR Putative uncharacterized protein
OS=Trypanosoma cruzi GN=Tc00.1047053508149.65 PE=4 SV=1
Length = 253

Score = 37.0 bits (84), Expect = 0.61
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = -3

Query: 266 LSLHCRSKDDLQEARRAWLAPLRQK--EGG*CQAWSYRTQTHAAQKKCWTCCHCSKRPAL 93
LS CR +D L + RRAW + Q GG ++ R Q + CW C C PA+
Sbjct: 172 LSRRCREQDVLTQPRRAWSVTMAQSAVAGG---IFTSRRQQRESCSCCWCRC-CLLWPAM 227

Query: 92 PLPMLPM 72
P+ + P+
Sbjct: 228 PIIVCPL 234


>tr|A8GLC9|A8GLC9_SERP5 Lipopolysaccharide heptosyltransferase II
OS=Serratia proteamaculans (strain 568) GN=Spro_4826
PE=4 SV=1
Length = 348

Score = 36.6 bits (83), Expect = 0.81
Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 14/68 (20%)
Frame = +2

Query: 44 LPDSSRG-STSLAASEEAKQA----ACCNGNTSNTSSVQHVF---------VYGNSRPDI 181
L D SRG +LA + +QA A C+ SN S + HV +YG S PD
Sbjct: 235 LDDDSRGFCMNLAGETQLEQAVILLASCSAVVSNDSGLMHVAAALNKPLIALYGPSSPDF 294

Query: 182 SPPLSGEA 205
+PPLS +A
Sbjct: 295 TPPLSDKA 302


>tr|B4VBE3|B4VBE3_9ACTO Ricin B lectin (Fragment) OS=Streptomyces
sp. Mg1 GN=SSAG_05071 PE=4 SV=1
Length = 398

Score = 36.6 bits (83), Expect = 0.81
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = +2

Query: 41 PLPDSSRGSTSLAASEEAKQAACCNGNTSNTSSVQHVFVYGNSRPDISPPLSGEAVQARR 220
P P ++ GS +AA A Q C+G+ S + VQ V+V+G+ R + E V + R
Sbjct: 92 PAPAAASGSQGVAAGP-AGQTVQCDGDGSTGNRVQVVYVHGSDRDRYA-----EYVASFR 145

Query: 221 AWLLGGRL-YSCNVVTEGGERVQSYV 295
W L YS + GG R YV
Sbjct: 146 KWAADADLIYSASAKETGGVRHIRYV 171


>tr|B4F131|B4F131_PROMH ADP-heptose--LPS heptosyltransferase II
OS=Proteus mirabilis (strain HI4320) GN=waaF PE=4 SV=1
Length = 350

Score = 36.2 bits (82), Expect = 1.1
Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 13/66 (19%)
Frame = +2

Query: 47 PDSSRGSTSLAASEEAKQA----ACCNGNTSNTSSVQHVF---------VYGNSRPDISP 187
PD+ +LA +QA A C SN S + HV +YG S PD +P
Sbjct: 238 PDAQAACINLAGETSLEQAVNLIAACKAVVSNDSGLMHVAAALERPLVALYGPSSPDFTP 297

Query: 188 PLSGEA 205
PLS +A
Sbjct: 298 PLSDKA 303


>tr|A1JHX5|A1JHX5_YERE8 ADP-heptose--LPS heptosyltransferase II
OS=Yersinia enterocolitica serotype O:8 / biotype 1B
(strain 8081) GN=rfaF PE=4 SV=1
Length = 354

Score = 36.2 bits (82), Expect = 1.1
Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 16/76 (21%)
Frame = +2

Query: 38 QPLPDSSR-------GSTSLAASEEAKQAACCNGNTSNTSSVQHVF---------VYGNS 169
Q L +S+R G TSL + A CN SN S + HV +YG S
Sbjct: 233 QALDESAREYCLNLAGQTSL--DQAVVMIAACNAVVSNDSGLMHVAAALNKPLVALYGPS 290

Query: 170 RPDISPPLSGEAVQAR 217
PD +PPLS +A R
Sbjct: 291 SPDFTPPLSDKATVIR 306


>tr|B2VL46|B2VL46_ERWT9 ADP-heptose--lps heptosyltransferase II
OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99)
GN=waaF PE=4 SV=1
Length = 348

Score = 35.8 bits (81), Expect = 1.4
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 13/58 (22%)
Frame = +2

Query: 71 SLAASEEAKQA----ACCNGNTSNTSSVQHVF---------VYGNSRPDISPPLSGEA 205
+LA + +QA ACC+ SN S + H+ +YG S PD +PPLS +A
Sbjct: 245 NLAGETQLEQAVILLACCHAIVSNDSGLMHIAAALDRPLIALYGPSSPDFTPPLSEKA 302


>tr|Q2NQV6|Q2NQV6_SODGM Lipopolysaccharide heptosyltransferase II
OS=Sodalis glossinidius (strain morsitans) GN=SG2194
PE=4 SV=1
Length = 349

Score = 34.7 bits (78), Expect = 3.1
Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 9/57 (15%)
Frame = +2

Query: 62 GSTSLAASEEAKQAACCNGNTSNTSSVQHVF---------VYGNSRPDISPPLSGEA 205
G TSL + A C G SN S + HV +YG S PD +PPLS +A
Sbjct: 248 GQTSL--EQAVTLIAACQGIVSNDSGLMHVASALDRPLVALYGPSSPDFTPPLSHQA 302


>tr|A2R8D2|A2R8D2_ASPNC Function: C. carbonum HTS is a multifunctional
peptide synthase OS=Aspergillus niger (strain CBS 513.88
/ FGSC A1513) GN=An16g06720 PE=3 SV=1
Length = 7035

Score = 34.3 bits (77), Expect = 4.0
Identities = 39/116 (33%), Positives = 58/116 (50%), Gaps = 7/116 (6%)
Frame = +2

Query: 2 ESLSLFPNVRMGQPL--PDSSR--GSTSLAASEEAKQAACCNGN--TSNTSSVQHVFVYG 163
ES+ +F NV M QPL PD R +T+L SEE A N ++ S + +
Sbjct: 6904 ESIIVFCNV-MDQPLLSPDEIRYLRTTTLLPSEEPLSATPTNEQLMVASISPTEMQWALE 6962

Query: 164 NSRPD-ISPPLSGEAVQARRAWLLGGRLYSCNVVTEGGERVQSYVYHCQEVDLSNP 328
++ D + PLS E + + LGG L S ++++ ER Q YV ++V L NP
Sbjct: 6963 SAWKDTFNCPLSPEVKAGKTIFDLGGDLISASLISAHMER-QGYVLSVEDV-LGNP 7016


>tr|A9I9A0|A9I9A0_BORPD Putative membrane protein OS=Bordetella
petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448)
GN=Bpet1012 PE=4 SV=1
Length = 214

Score = 33.9 bits (76), Expect = 5.2
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -3

Query: 218 AWLAPLRQKEGG*CQAWSYRTQTHAAQKKCWTCC 117
AWL L G QAW+ RT + A ++CW C
Sbjct: 166 AWLIALPLLLAGATQAWAVRTHSEPASQRCWGSC 199