BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946625|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0013_D11, 5'
         (443 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q7YJS6|YCF1_CALFG Putative membrane protein ycf1 OS=Calycanth...    31   2.0  
sp|Q3V4X6|YCF1_ACOCL Putative membrane protein ycf1 OS=Acorus ca...    29   7.7  
sp|A9LYF8|YCF1_ACOAM Putative membrane protein ycf1 OS=Acorus am...    29   7.7  

>sp|Q7YJS6|YCF1_CALFG Putative membrane protein ycf1 OS=Calycanthus
           floridus var. glaucus GN=ycf1 PE=3 SV=1
          Length = 1828

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
 Frame = +2

Query: 146 SRHSFISRTREYSDETELFCYPKKYLV*FLLPGR*IKKEIYG*TSNIADSSSLNL---IE 316
           S H    RTR Y+D+ E  C P+ Y      P R   K++Y  + +I D+S+ +    + 
Sbjct: 440 SMHVLEKRTRLYNDKNEQECLPRMYDPFLNGPYRGTIKKVY--SHSILDASTTSTEDSLR 497

Query: 317 YIWERKLE*INP 352
            +W  K++ I P
Sbjct: 498 VVWINKIDDILP 509


>sp|Q3V4X6|YCF1_ACOCL Putative membrane protein ycf1 OS=Acorus
           calamus GN=ycf1 PE=3 SV=1
          Length = 1913

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = +2

Query: 167 RTREYSDETELFCYPKKY--LV*FLLPGR*IKKEIYG*TSNIADSSSLNLIEYIWERKL 337
           RTR   DE E  C PKKY  L+     GR IKK     T N +  S+   +E IW+ K+
Sbjct: 507 RTRLCDDENEQECLPKKYDPLLNGSYRGR-IKKLESESTRNDSIISAKGSLEKIWKNKI 564


>sp|A9LYF8|YCF1_ACOAM Putative membrane protein ycf1 OS=Acorus
           americanus GN=ycf1 PE=3 SV=1
          Length = 1913

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = +2

Query: 167 RTREYSDETELFCYPKKY--LV*FLLPGR*IKKEIYG*TSNIADSSSLNLIEYIWERKL 337
           RTR   DE E  C PKKY  L+     GR IKK     T N +  S+   +E IW+ K+
Sbjct: 507 RTRLCDDENEQECLPKKYDPLLNGSYRGR-IKKLESESTRNDSIISAKGSLEKIWKNKI 564

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946625|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0013_D11, 5'
         (443 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9BL44|A9BL44_9CRYP Putative uncharacterized protein OS=Crypt...    33   5.4  
tr|Q2GVB5|Q2GVB5_CHAGB Putative uncharacterized protein OS=Chaet...    33   5.4  
tr|A7RX85|A7RX85_NEMVE Predicted protein OS=Nematostella vectens...    33   7.0  
tr|Q4A5N4|Q4A5N4_MYCS5 DNA polymerase III alpha subunit OS=Mycop...    33   9.2  

>tr|A9BL44|A9BL44_9CRYP Putative uncharacterized protein
           OS=Cryptophyta GN=HAN_3g417 PE=4 SV=1
          Length = 448

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 18/66 (27%), Positives = 32/66 (48%)
 Frame = +3

Query: 42  RNRISANLNEKKKLYLRTKYVFSYCFSKIIGKLINLVTHSFQELENIVTKQNCFVTPRNT 221
           +N +  N++  K  YLR  + F   F  +  K++     SF  ++ I   +N    P+N+
Sbjct: 23  KNFMKKNISRIKNYYLRRNFFFRKRFFSLFEKIMVQDNKSFFIMDQIENIENLHCYPKNS 82

Query: 222 WFNFYF 239
             NF+F
Sbjct: 83  SKNFHF 88


>tr|Q2GVB5|Q2GVB5_CHAGB Putative uncharacterized protein
           OS=Chaetomium globosum GN=CHGG_08089 PE=4 SV=1
          Length = 1242

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 11/60 (18%)
 Frame = -1

Query: 380 HRCSIILTNPDLFIPTFFPRYIL*GL-----------VTMSQLC*TSTHRFLSLFISPEV 234
           H CS++++N DLF+    PRYI   L           VT +QL    THR +  F  P++
Sbjct: 492 HVCSLLMSNVDLFLDNGDPRYIRTLLTQLYNSIMELRVTCTQLAAEGTHRSVPSFSRPDL 551


>tr|A7RX85|A7RX85_NEMVE Predicted protein OS=Nematostella vectensis
           GN=v1g203500 PE=4 SV=1
          Length = 342

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 24/136 (17%)
 Frame = +2

Query: 80  TLSSHKICVFLLFLQNYR*INQ-SRHSFISRTRE----------------YSDETELFCY 208
           TL++  IC+ L+ L NY  I    RH  + R+ +                Y     L CY
Sbjct: 174 TLTTVSICLVLILLTNYVLIKAVQRHRKLIRSHQVVQRNKTPRSRDAAVIYVFAAVLICY 233

Query: 209 PKKYLV*F--LLPGR*IKKEIYG*TSNIADS-----SSLNLIEYIWERKLE*INPGLSRL 367
              ++V    L+ G     ++    +NIA+S     SS+N   Y W  ++E I   ++RL
Sbjct: 234 IPDFVVIIHTLITG---GTDLTKFVANIAESVTFLTSSINPAIYCW--RIEEIRREIARL 288

Query: 368 LNIYVVERYPSFQQLG 415
           L I   E +PSF+ LG
Sbjct: 289 LGIR--ESHPSFKNLG 302


>tr|Q4A5N4|Q4A5N4_MYCS5 DNA polymerase III alpha subunit
           OS=Mycoplasma synoviae (strain 53) GN=dnaE PE=4 SV=1
          Length = 990

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +3

Query: 63  LNEKKKLYLRTKYVFSYCFSKI-IGKLINLVTHSFQELENIVTKQNCFVTP 212
           +N KK +YL  K  FS+  S I + KL NL+     E   I  K+N +  P
Sbjct: 1   MNNKKPIYLHLKTEFSFLNSAIRLNKLFNLIESQKIEYLAITDKENLYALP 51