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NBDC - LSDB Archive
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DK946626
Clone id YMU02A01NGRL0013_D13
Library
Length 524
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0013_D13. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
TCACCGTTTCGGCAGCAGCAGCCGACAGGCCTTTGTGGTTCCCCGGCAGCACTCCTCCCG
AATGGCTTGACGGAAGCCTACCTGGGGACTTTGGTTTTGACCCCCTTGGTCTCGGATCCG
AGCCTGAGCTCCTCAAGTGGTTTGTGCAATCAGAGATAGTGCACTGCCGGTGGGCTATGT
TGGGTGCTGCTGGAATATTCATTCCAGAGGCTCTCACCAAAGCAGGAATCTTGAACACCC
CATCATGGTACTCAGCTGGAGAGGCCGAGTACTTCACAGATACGACTACCCTCTTCGTTG
TGGAGCTTATATTCTTGGGTTGGGCCGAGGGCCGAAGATGGGCAGACATCATCACTCCAG
GATCAGTGAATACTGATCCCATCTTCACCAACAACAAGCTAACAGGCACAGATGTCGGAT
ATCCCGGTGGCTTCTGGTTTGACCCTCTAGGCTGGGGCTCTGGTTCTCCTGAGAAGCTCA
AGGAGCTAAGGACTAAGGAGATCAAGAATGGCAGACTCGCTATG
■■Homology search results ■■ -
sp_hit_id P13869
Definition sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida
Align length 175
Score (bit) 325.0
E-value 8.0e-89
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946626|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0013_D13, 5'
         (524 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplas...   325   8e-89
sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloropl...   322   5e-88
sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloropl...   185   1e-46
sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloropla...   184   2e-46
sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chl...   152   7e-37
sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplas...   138   1e-32
sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloropl...   138   1e-32
sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24, chloro...   136   5e-32
sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A, c...   129   8e-30
sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B, c...   125   1e-28
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl...   120   3e-27
sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop...   116   6e-26
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...   101   2e-21
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop...   101   2e-21
sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloropl...   101   2e-21
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   101   2e-21
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...   100   3e-21
sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor...   100   3e-21
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl...   100   4e-21
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop...   100   4e-21
sp|P22686|CB2_CHLMO Chlorophyll a-b binding protein of LHCII typ...   100   7e-21
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...   100   7e-21
sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplas...    99   1e-20
sp|P12471|CB21_SOYBN Chlorophyll a-b binding protein, chloroplas...    99   2e-20
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...    99   2e-20
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...    98   2e-20
sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloropl...    98   2e-20
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...    98   3e-20
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...    97   4e-20
sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloropl...    97   4e-20

>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic
           OS=Petunia hybrida PE=2 SV=1
          Length = 270

 Score =  325 bits (833), Expect = 8e-89
 Identities = 150/175 (85%), Positives = 159/175 (90%), Gaps = 2/175 (1%)
 Frame = +3

Query: 6   VSAAAAD--RPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWAM 179
           VSA AAD  RPLWFPGSTPPEWLDGSLPGDFGFDPLGLGS+PE LKW  Q+E+VH RWAM
Sbjct: 56  VSAVAADPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAM 115

Query: 180 LGAAGIFIPEALTKAGILNTPSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITP 359
           LGAAGIFIPE LTK G+LNTPSWY+AGE EYFTDTTTLFV+EL+ +GWAEGRRWADII P
Sbjct: 116 LGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKP 175

Query: 360 GSVNTDPIFTNNKLTGTDVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAM 524
           G VNTDPIF NNKLTGTDVGYPGG WFDPLGWGSGSP K+KELRTKEIKNGRLAM
Sbjct: 176 GCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAM 230


>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7,
           chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1
          Length = 270

 Score =  322 bits (826), Expect = 5e-88
 Identities = 146/171 (85%), Positives = 155/171 (90%)
 Frame = +3

Query: 12  AAAADRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWAMLGAA 191
           AA  DRPLWFPGSTPP WLDGSLPGDFGFDPLGL S+PE L+W  Q+E+VHCRWAMLGAA
Sbjct: 60  AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAA 119

Query: 192 GIFIPEALTKAGILNTPSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITPGSVN 371
           GIFIPE LTK GILNTPSWY+AGE EYFTDTTTLF+VEL+ +GWAEGRRWADII PG VN
Sbjct: 120 GIFIPELLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPGCVN 179

Query: 372 TDPIFTNNKLTGTDVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAM 524
           TDPIF NNKLTGTDVGYPGG WFDPLGWGSGSP K+KELRTKEIKNGRLAM
Sbjct: 180 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAM 230


>sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4,
           chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1
          Length = 251

 Score =  185 bits (469), Expect = 1e-46
 Identities = 89/163 (54%), Positives = 110/163 (67%)
 Frame = +3

Query: 36  WFPGSTPPEWLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWAMLGAAGIFIPEAL 215
           W PG   P++L GSL GD GFDPLGL  +PE LKWFVQ+E+V+ RWAMLG AG+ +PE  
Sbjct: 57  WLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVF 116

Query: 216 TKAGILNTPSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITPGSVNTDPIFTNN 395
           TK GI+N P WY AG+ +YF  ++TLFV+E I   + E RRW DI  PGSVN DPIF   
Sbjct: 117 TKIGIINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQY 176

Query: 396 KLTGTDVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAM 524
            L   +VGYPGG  F+PL +        +E + KE+ NGRLAM
Sbjct: 177 SLPKGEVGYPGGI-FNPLNFA-----PTQEAKEKELANGRLAM 213


>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4,
           chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1
          Length = 252

 Score =  184 bits (468), Expect = 2e-46
 Identities = 90/163 (55%), Positives = 109/163 (66%)
 Frame = +3

Query: 36  WFPGSTPPEWLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWAMLGAAGIFIPEAL 215
           W PG   P +L GSLPGD GFDPLGL  +PE L+WFVQ+E+V+ RWAMLG AG+ +PE  
Sbjct: 56  WLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVF 115

Query: 216 TKAGILNTPSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITPGSVNTDPIFTNN 395
           T  GI+N P WY+AG+ EYF  ++TLFV+E I   + E RRW DI  PGSVN DPIF   
Sbjct: 116 TSIGIINVPKWYAAGKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQY 175

Query: 396 KLTGTDVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAM 524
            L   +VGYPGG  F+PL +         E + KEI NGRLAM
Sbjct: 176 SLPAGEVGYPGGI-FNPLNFA-----PTLEAKEKEIANGRLAM 212


>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20,
           chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20
           PE=1 SV=1
          Length = 231

 Score =  152 bits (385), Expect = 7e-37
 Identities = 83/164 (50%), Positives = 105/164 (64%), Gaps = 1/164 (0%)
 Frame = +3

Query: 36  WFPGSTPPEWLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWAMLGAAGIFIPEAL 215
           W PG   P +LDGSL GD GFDPL L  +PE L+WFVQ+++V+ RWAMLG AG+ IPE L
Sbjct: 36  WLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFVQADVVNGRWAMLGVAGMLIPEVL 95

Query: 216 TKAGILNTPSWYS-AGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITPGSVNTDPIFTN 392
           TKAG++N P W    G+  YF  ++T   V +    + E RRW DI  PGSVN DPIF +
Sbjct: 96  TKAGLMNAPEWLRLPGKETYFASSSTALRVHMSST-YVEIRRWQDIKNPGSVNQDPIFKS 154

Query: 393 NKLTGTDVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAM 524
             L   + GYPG   F+PL +   +P + KE   KE+ NGRLAM
Sbjct: 155 YSLPPHECGYPGRV-FNPLNF---APLENKE---KELANGRLAM 191


>sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplastic
           OS=Pisum sativum GN=lhca3 PE=1 SV=1
          Length = 275

 Score =  138 bits (348), Expect = 1e-32
 Identities = 82/190 (43%), Positives = 108/190 (56%), Gaps = 17/190 (8%)
 Frame = +3

Query: 6   VSAAAADRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSEPELL------KWFVQSEIVHC 167
           V     DRPLWF       +LDGSLPGD+GFDPLGL S+PE        +W    E+++ 
Sbjct: 48  VKQGGVDRPLWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPRWLAYGEVING 106

Query: 168 RWAMLGAAGIFIPEALTKAGIL---NTPSWYS------AGEAEYFTDTTTLFVVELIFLG 320
           R+AMLGA G   PE L K G++      +W+       AG   Y+ D  TLFV+E+  +G
Sbjct: 107 RFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMG 166

Query: 321 WAEGRRWADIITPGSVNTDPIFTNNKLTG--TDVGYPGGFWFDPLGWGSGSPEKLKELRT 494
           +AE RR+ D   PGS+         K  G   +  YPGG +F+PLG+G    + LKEL+ 
Sbjct: 167 FAEHRRFQDWAKPGSMGKQYFLGLEKGFGGSGNPAYPGGPFFNPLGFGK-DEKSLKELKL 225

Query: 495 KEIKNGRLAM 524
           KE+KNGRLAM
Sbjct: 226 KEVKNGRLAM 235



 Score = 34.7 bits (78), Expect = 0.28
 Identities = 23/63 (36%), Positives = 30/63 (47%)
 Frame = +3

Query: 39  FPGSTPPEWLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWAMLGAAGIFIPEALT 218
           F GS  P +     PG   F+PLG G + + LK     E+ + R AML   G FI   +T
Sbjct: 194 FGGSGNPAY-----PGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVT 248

Query: 219 KAG 227
             G
Sbjct: 249 GVG 251


>sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8,
           chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1
          Length = 273

 Score =  138 bits (348), Expect = 1e-32
 Identities = 84/185 (45%), Positives = 107/185 (57%), Gaps = 17/185 (9%)
 Frame = +3

Query: 21  ADRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSEPELL------KWFVQSEIVHCRWAML 182
           A+R LWF       +LDG LPGDFGFDPLGL S+PE        KW    E+++ R+AML
Sbjct: 51  ANRQLWFASKQSLSYLDGRLPGDFGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRFAML 109

Query: 183 GAAGIFIPEALTKAGIL---NTPSWYS------AGEAEYFTDTTTLFVVELIFLGWAEGR 335
           GAAG   PE L KAG++      +W+       AG   Y+ D  TLFV+E+  +G+AE R
Sbjct: 110 GAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHR 169

Query: 336 RWADIITPGSVNTDPIFTNNKLTG--TDVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKN 509
           R+ D   PGS+         K  G   D  YPGG  F+PLG+G    + +KEL+ KEIKN
Sbjct: 170 RFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGK-DEKSMKELKLKEIKN 228

Query: 510 GRLAM 524
           GRLAM
Sbjct: 229 GRLAM 233



 Score = 35.0 bits (79), Expect = 0.22
 Identities = 20/53 (37%), Positives = 27/53 (50%)
 Frame = +3

Query: 69  DGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWAMLGAAGIFIPEALTKAG 227
           D + PG   F+PLG G + + +K     EI + R AML   G FI   +T  G
Sbjct: 197 DPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQALVTGVG 249


>sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24,
           chloroplastic OS=Spinacia oleracea PE=2 SV=1
          Length = 261

 Score =  136 bits (343), Expect = 5e-32
 Identities = 85/199 (42%), Positives = 110/199 (55%), Gaps = 26/199 (13%)
 Frame = +3

Query: 6   VSAAAADRPLWFPGST------PPEWLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHC 167
           V+AAAA +  W P          PEWLDGSLPGDFGFDPLGLG +P  LKW+ ++E++H 
Sbjct: 50  VAAAAAPKKSWIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHG 109

Query: 168 RWAMLGAAGIFIPEALTKAGILNTPSWYSAGE---AEYFTDTTTLFVVELIFLGWAEGRR 338
           RWAML   GIF+ +A T  GI     W+ AG    A       TL   +L+ +GW E +R
Sbjct: 110 RWAMLAVLGIFVGQAWT--GI----PWFEAGADPGAVAPFSFGTLLGTQLLLMGWVESKR 163

Query: 339 WADIITPGSVN---------TDPIFTNNKLTGTDVGYPGGFWFDPL--------GWGSGS 467
           W D   P S +         T   F+N+  TG + GYPGG +FDPL        G  +  
Sbjct: 164 WVDFFDPDSQSVEWATPWSRTAENFSNS--TG-EQGYPGGKFFDPLSLAGTISNGVYNPD 220

Query: 468 PEKLKELRTKEIKNGRLAM 524
            +KL+ L+  EIK+ RLAM
Sbjct: 221 TDKLERLKLAEIKHARLAM 239


>sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A,
           chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3
           SV=1
          Length = 256

 Score =  129 bits (324), Expect = 8e-30
 Identities = 85/200 (42%), Positives = 106/200 (53%), Gaps = 26/200 (13%)
 Frame = +3

Query: 3   TVSAAAADRPLWFPGS------TPPEWLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVH 164
           TV AAAA +  W P          PEWLDGSLPGD+GFDPLGLG +P  LKW+ ++E++H
Sbjct: 45  TVLAAAAKKS-WIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIH 103

Query: 165 CRWAMLGAAGIFIPEALTKAGILNTPSWYSAGE---AEYFTDTTTLFVVELIFLGWAEGR 335
            RWAM    GIF+ +A   +GI     W+ AG    A       TL   +LI +GW E +
Sbjct: 104 GRWAMAAVLGIFVGQAW--SGI----PWFEAGADPGAIAPFSFGTLLGTQLILMGWVESK 157

Query: 336 RWADIITPGSVN---------TDPIFTNNKLTGTDVGYPGGFWFDPL--------GWGSG 464
           RW D   P S +         T   F N   TG + GYPGG +FDPL        G    
Sbjct: 158 RWVDFFDPDSQSVEWATPWSKTAENFAN--FTG-EQGYPGGKFFDPLALAGTLNNGVYVP 214

Query: 465 SPEKLKELRTKEIKNGRLAM 524
             EKL+ L+  EIK+ RLAM
Sbjct: 215 DTEKLERLKVAEIKHARLAM 234


>sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B,
           chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3
           SV=1
          Length = 256

 Score =  125 bits (314), Expect = 1e-28
 Identities = 79/196 (40%), Positives = 103/196 (52%), Gaps = 24/196 (12%)
 Frame = +3

Query: 9   SAAAADRPLWFPGS------TPPEWLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCR 170
           +AA A +  W P          PEWLDGSLPGDFGFDPLGLG +P  LKW+ ++E++H R
Sbjct: 46  AAAVAPKKSWIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGR 105

Query: 171 WAMLGAAGIFIPEALTKAGILNTPSWYSAGE---AEYFTDTTTLFVVELIFLGWAEGRRW 341
           WAM    GIF+ +A   +GI     W+ AG    A       +L   +L+ +GW E +RW
Sbjct: 106 WAMAAVLGIFVGQAW--SGI----PWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRW 159

Query: 342 ADIITPGSVNTDPIFTNNK-------LTGTDVGYPGGFWFDPL--------GWGSGSPEK 476
            D     S + D     +K        TG + GYPGG +FDPL        G      EK
Sbjct: 160 VDFFDNDSQSIDWATPWSKTAENFANFTG-EQGYPGGKFFDPLALAGTLNNGVYVPDTEK 218

Query: 477 LKELRTKEIKNGRLAM 524
           L+ L+  EIK+ RLAM
Sbjct: 219 LERLKLAEIKHSRLAM 234
tr_hit_id A7QP61
Definition tr|A7QP61|A7QP61_VITVI Chromosome chr1 scaffold_136, whole genome shotgun sequence OS=Vitis vinifera
Align length 176
Score (bit) 336.0
E-value 4.0e-91
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946626|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0013_D13, 5'
         (524 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7QP61|A7QP61_VITVI Chromosome chr1 scaffold_136, whole genom...   336   4e-91
tr|A5B4F0|A5B4F0_VITVI Putative uncharacterized protein OS=Vitis...   336   4e-91
tr|A9PGU8|A9PGU8_POPTR Putative uncharacterized protein OS=Popul...   331   1e-89
tr|A9PGU3|A9PGU3_POPTR Putative uncharacterized protein OS=Popul...   330   3e-89
tr|Q6ZL95|Q6ZL95_ORYSJ Os07g0577600 protein OS=Oryza sativa subs...   329   4e-89
tr|A2YMZ1|A2YMZ1_ORYSI Putative uncharacterized protein OS=Oryza...   329   4e-89
tr|Q8VXA6|Q8VXA6_PICAB Putative chlorophyll A-B binding protein ...   329   6e-89
tr|Q02070|Q02070_PINSY Type II chlorophyll a /b-binding protein ...   329   6e-89
tr|A9NKX1|A9NKX1_PICSI Putative uncharacterized protein OS=Picea...   329   6e-89
tr|Q9SYW8|Q9SYW8_ARATH Lhca2 protein OS=Arabidopsis thaliana GN=...   327   2e-88
tr|Q9M320|Q9M320_ARATH Lhca2 protein OS=Arabidopsis thaliana GN=...   327   2e-88
tr|Q40252|Q40252_LOLTE Type II LHCI OS=Lolium temulentum GN=lhaB...   327   2e-88
tr|B6SMV5|B6SMV5_MAIZE Chlorophyll a-b binding protein OS=Zea ma...   327   2e-88
tr|B6SJV3|B6SJV3_MAIZE Chlorophyll a-b binding protein OS=Zea ma...   326   5e-88
tr|Q43485|Q43485_HORVU LHCI-680, photosystem I antenna protein O...   325   1e-87
tr|A4URF4|A4URF4_BRAJU LhCa2 protein OS=Brassica juncea PE=2 SV=2     325   1e-87
tr|Q41038|Q41038_PEA Type II chlorophyll a/b binding protein fro...   323   2e-87
tr|B6T892|B6T892_MAIZE Chlorophyll a-b binding protein OS=Zea ma...   323   3e-87
tr|B6TKL9|B6TKL9_MAIZE Chlorophyll a-b binding protein OS=Zea ma...   320   2e-86
tr|A9TJ06|A9TJ06_PHYPA Predicted protein OS=Physcomitrella paten...   310   4e-83
tr|A9TV00|A9TV00_PHYPA Predicted protein (Fragment) OS=Physcomit...   305   1e-81
tr|B4YYB1|B4YYB1_THEHA ST49-6 (Fragment) OS=Thellungiella haloph...   303   3e-81
tr|A9U5E4|A9U5E4_PHYPA Predicted protein OS=Physcomitrella paten...   298   8e-80
tr|A9TV02|A9TV02_PHYPA Predicted protein OS=Physcomitrella paten...   295   9e-79
tr|A9RW10|A9RW10_PHYPA Predicted protein OS=Physcomitrella paten...   295   9e-79
tr|O22383|O22383_ORYSA Photosystem I antenna protein OS=Oryza sa...   291   1e-77
tr|A9PJQ2|A9PJQ2_POPJC Putative uncharacterized protein OS=Popul...   253   4e-66
tr|A7PDT5|A7PDT5_VITVI Chromosome chr11 scaffold_13, whole genom...   253   4e-66
tr|A5BBT6|A5BBT6_VITVI Putative uncharacterized protein OS=Vitis...   253   4e-66
tr|Q9LMB1|Q9LMB1_ARATH T29M8.2 protein OS=Arabidopsis thaliana G...   252   9e-66

>tr|A7QP61|A7QP61_VITVI Chromosome chr1 scaffold_136, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00002813001
           PE=4 SV=1
          Length = 270

 Score =  336 bits (862), Expect = 4e-91
 Identities = 156/176 (88%), Positives = 163/176 (92%), Gaps = 2/176 (1%)
 Frame = +3

Query: 3   TVSAAAAD--RPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWA 176
           TVSAAAAD  RPLWFPGSTPP WLDGSLPGDFGFDPLGLGS+PE LKW VQSEIVHCRWA
Sbjct: 55  TVSAAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPETLKWMVQSEIVHCRWA 114

Query: 177 MLGAAGIFIPEALTKAGILNTPSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIIT 356
           MLGAAGIFIPE LTK GILNTPSWY+AGE EYFTD TTLF+VE+IF+GWAEGRRWADII 
Sbjct: 115 MLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDKTTLFIVEMIFIGWAEGRRWADIIK 174

Query: 357 PGSVNTDPIFTNNKLTGTDVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAM 524
           PG VNTDPIF NNKLTGTDVGYPGG WFDPLGWGSGSP+K+KELRTKEIKNGRLAM
Sbjct: 175 PGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPDKIKELRTKEIKNGRLAM 230


>tr|A5B4F0|A5B4F0_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_033663 PE=4 SV=1
          Length = 272

 Score =  336 bits (862), Expect = 4e-91
 Identities = 156/176 (88%), Positives = 163/176 (92%), Gaps = 2/176 (1%)
 Frame = +3

Query: 3   TVSAAAAD--RPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWA 176
           TVSAAAAD  RPLWFPGSTPP WLDGSLPGDFGFDPLGLGS+PE LKW VQSEIVHCRWA
Sbjct: 57  TVSAAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPETLKWMVQSEIVHCRWA 116

Query: 177 MLGAAGIFIPEALTKAGILNTPSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIIT 356
           MLGAAGIFIPE LTK GILNTPSWY+AGE EYFTD TTLF+VE+IF+GWAEGRRWADII 
Sbjct: 117 MLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDKTTLFIVEMIFIGWAEGRRWADIIK 176

Query: 357 PGSVNTDPIFTNNKLTGTDVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAM 524
           PG VNTDPIF NNKLTGTDVGYPGG WFDPLGWGSGSP+K+KELRTKEIKNGRLAM
Sbjct: 177 PGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPDKIKELRTKEIKNGRLAM 232


>tr|A9PGU8|A9PGU8_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 269

 Score =  331 bits (849), Expect = 1e-89
 Identities = 150/171 (87%), Positives = 158/171 (92%)
 Frame = +3

Query: 12  AAAADRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWAMLGAA 191
           AA  DRPLWFPGSTPP WLDGSLPGDFGFDPLGLGS+PE L+W VQ+E+VHCRWAMLGAA
Sbjct: 59  AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPETLRWNVQAELVHCRWAMLGAA 118

Query: 192 GIFIPEALTKAGILNTPSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITPGSVN 371
           GIFIPE LTK GILNTPSWYSAGE EYFTDTTTLF+VEL F+GWAEGRRWADI+ PG VN
Sbjct: 119 GIFIPEFLTKIGILNTPSWYSAGEVEYFTDTTTLFIVELFFIGWAEGRRWADILKPGCVN 178

Query: 372 TDPIFTNNKLTGTDVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAM 524
           TDPIF NNKLTGTDVGYPGG WFDPLGWGSGSPEK+KELRTKEIKNGRLAM
Sbjct: 179 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAM 229



 Score = 35.0 bits (79), Expect = 2.3
 Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +3

Query: 69  DGSLPGDFGFDPLGLGS-EPELLKWFVQSEIVHCRWAMLGAAGIFIPEALTKAG 227
           D   PG   FDPLG GS  PE +K     EI + R AML   G +     T  G
Sbjct: 192 DVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTG 245


>tr|A9PGU3|A9PGU3_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 269

 Score =  330 bits (845), Expect = 3e-89
 Identities = 149/171 (87%), Positives = 158/171 (92%)
 Frame = +3

Query: 12  AAAADRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWAMLGAA 191
           AA  DRPLWFPGSTPP WLDGSLPGDFGFDPLGLGS+PE L+W VQ+E+VHCRWAMLGAA
Sbjct: 59  AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPETLRWNVQAELVHCRWAMLGAA 118

Query: 192 GIFIPEALTKAGILNTPSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITPGSVN 371
           GIFIPE LTK GILNTPSWY+AGE EYFTDTTTLF+VEL F+GWAEGRRWADI+ PG VN
Sbjct: 119 GIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELFFIGWAEGRRWADILKPGCVN 178

Query: 372 TDPIFTNNKLTGTDVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAM 524
           TDPIF NNKLTGTDVGYPGG WFDPLGWGSGSPEK+KELRTKEIKNGRLAM
Sbjct: 179 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAM 229



 Score = 35.0 bits (79), Expect = 2.3
 Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +3

Query: 69  DGSLPGDFGFDPLGLGS-EPELLKWFVQSEIVHCRWAMLGAAGIFIPEALTKAG 227
           D   PG   FDPLG GS  PE +K     EI + R AML   G +     T  G
Sbjct: 192 DVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTG 245


>tr|Q6ZL95|Q6ZL95_ORYSJ Os07g0577600 protein OS=Oryza sativa subsp.
           japonica GN=OJ1065_B06.19-1 PE=2 SV=1
          Length = 263

 Score =  329 bits (844), Expect = 4e-89
 Identities = 148/173 (85%), Positives = 160/173 (92%)
 Frame = +3

Query: 6   VSAAAADRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWAMLG 185
           V AAA DRP+WFPGSTPP WLDGSLPGDFGFDPLGLGS+PE L+W VQ+E+VHCRWAMLG
Sbjct: 51  VRAAAPDRPIWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLG 110

Query: 186 AAGIFIPEALTKAGILNTPSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITPGS 365
           AAGIFIPE LTK GILNTPSWY+AGE +YFTDTTTLF++ELI +GWAEGRRWADII PG 
Sbjct: 111 AAGIFIPEFLTKIGILNTPSWYTAGEQQYFTDTTTLFIIELILIGWAEGRRWADIIKPGC 170

Query: 366 VNTDPIFTNNKLTGTDVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAM 524
           VNTDPIF NNKLTGTDVGYPGG WFDPLGWG+GSPEK+KELRTKEIKNGRLAM
Sbjct: 171 VNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGTGSPEKIKELRTKEIKNGRLAM 223



 Score = 33.5 bits (75), Expect = 6.6
 Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +3

Query: 69  DGSLPGDFGFDPLGLGS-EPELLKWFVQSEIVHCRWAMLGAAGIFIPEALTKAG 227
           D   PG   FDPLG G+  PE +K     EI + R AML   G +     T  G
Sbjct: 186 DVGYPGGLWFDPLGWGTGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTG 239


>tr|A2YMZ1|A2YMZ1_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_26600 PE=4 SV=1
          Length = 263

 Score =  329 bits (844), Expect = 4e-89
 Identities = 148/173 (85%), Positives = 160/173 (92%)
 Frame = +3

Query: 6   VSAAAADRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWAMLG 185
           V AAA DRP+WFPGSTPP WLDGSLPGDFGFDPLGLGS+PE L+W VQ+E+VHCRWAMLG
Sbjct: 51  VRAAAPDRPIWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLG 110

Query: 186 AAGIFIPEALTKAGILNTPSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITPGS 365
           AAGIFIPE LTK GILNTPSWY+AGE +YFTDTTTLF++ELI +GWAEGRRWADII PG 
Sbjct: 111 AAGIFIPEFLTKIGILNTPSWYTAGEQQYFTDTTTLFIIELILIGWAEGRRWADIIKPGC 170

Query: 366 VNTDPIFTNNKLTGTDVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAM 524
           VNTDPIF NNKLTGTDVGYPGG WFDPLGWG+GSPEK+KELRTKEIKNGRLAM
Sbjct: 171 VNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGTGSPEKIKELRTKEIKNGRLAM 223



 Score = 33.5 bits (75), Expect = 6.6
 Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +3

Query: 69  DGSLPGDFGFDPLGLGS-EPELLKWFVQSEIVHCRWAMLGAAGIFIPEALTKAG 227
           D   PG   FDPLG G+  PE +K     EI + R AML   G +     T  G
Sbjct: 186 DVGYPGGLWFDPLGWGTGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTG 239


>tr|Q8VXA6|Q8VXA6_PICAB Putative chlorophyll A-B binding protein of
           LHCI type II OS=Picea abies GN=pPA0001 PE=2 SV=1
          Length = 278

 Score =  329 bits (843), Expect = 6e-89
 Identities = 150/171 (87%), Positives = 157/171 (91%)
 Frame = +3

Query: 12  AAAADRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWAMLGAA 191
           A   +RPLWFPG+TPP WLDGSLP DFGFDPLGLGS+PE LKW VQSE+VHCRWAMLGAA
Sbjct: 68  AVQTERPLWFPGTTPPPWLDGSLPADFGFDPLGLGSDPETLKWNVQSELVHCRWAMLGAA 127

Query: 192 GIFIPEALTKAGILNTPSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITPGSVN 371
           GIFIPE LTK GILNTPSWY+AGE EYFTD TTLFVVE+IFLGWAEGRRWADII PGSVN
Sbjct: 128 GIFIPELLTKLGILNTPSWYTAGELEYFTDKTTLFVVEMIFLGWAEGRRWADIIKPGSVN 187

Query: 372 TDPIFTNNKLTGTDVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAM 524
           TDPIF NNKLTGTDVGYPGG WFDPLGWGSGSPEK+KELRTKEIKNGRLAM
Sbjct: 188 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAM 238



 Score = 34.7 bits (78), Expect = 3.0
 Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +3

Query: 69  DGSLPGDFGFDPLGLGS-EPELLKWFVQSEIVHCRWAMLGAAGIFIPEALTKAG 227
           D   PG   FDPLG GS  PE +K     EI + R AML   G +     T  G
Sbjct: 201 DVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTG 254


>tr|Q02070|Q02070_PINSY Type II chlorophyll a /b-binding protein
           OS=Pinus sylvestris GN=lhaB1 PE=2 SV=1
          Length = 278

 Score =  329 bits (843), Expect = 6e-89
 Identities = 151/175 (86%), Positives = 160/175 (91%), Gaps = 1/175 (0%)
 Frame = +3

Query: 3   TVSAAA-ADRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWAM 179
           TVS A   +RPLWFPG+TPP WLDGSLPGDFGFDPLGLGS+PE LKW VQ+E+VHCRWAM
Sbjct: 64  TVSQAVQTERPLWFPGNTPPPWLDGSLPGDFGFDPLGLGSDPETLKWMVQAELVHCRWAM 123

Query: 180 LGAAGIFIPEALTKAGILNTPSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITP 359
           LGAAGIFIPE  TK GILNTPSWY+AGE EYFTD TTLFVVE+IFLGWAEGRRWADI+ P
Sbjct: 124 LGAAGIFIPELCTKLGILNTPSWYTAGELEYFTDKTTLFVVEMIFLGWAEGRRWADILEP 183

Query: 360 GSVNTDPIFTNNKLTGTDVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAM 524
           GSVNTDPIF NNKLTGTDVGYPGG WFDPLGWGSGSPEK+KELRTKEIKNGRLAM
Sbjct: 184 GSVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAM 238



 Score = 34.7 bits (78), Expect = 3.0
 Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +3

Query: 69  DGSLPGDFGFDPLGLGS-EPELLKWFVQSEIVHCRWAMLGAAGIFIPEALTKAG 227
           D   PG   FDPLG GS  PE +K     EI + R AML   G +     T  G
Sbjct: 201 DVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTG 254


>tr|A9NKX1|A9NKX1_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 278

 Score =  329 bits (843), Expect = 6e-89
 Identities = 150/171 (87%), Positives = 157/171 (91%)
 Frame = +3

Query: 12  AAAADRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWAMLGAA 191
           A   +RPLWFPG+TPP WLDGSLP DFGFDPLGLGS+PE LKW VQSE+VHCRWAMLGAA
Sbjct: 68  AVQTERPLWFPGTTPPPWLDGSLPADFGFDPLGLGSDPETLKWNVQSELVHCRWAMLGAA 127

Query: 192 GIFIPEALTKAGILNTPSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITPGSVN 371
           GIFIPE LTK GILNTPSWY+AGE EYFTD TTLFVVE+IFLGWAEGRRWADII PGSVN
Sbjct: 128 GIFIPELLTKLGILNTPSWYTAGEQEYFTDKTTLFVVEMIFLGWAEGRRWADIIKPGSVN 187

Query: 372 TDPIFTNNKLTGTDVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAM 524
           TDPIF NNKLTGTDVGYPGG WFDPLGWGSGSPEK+KELRTKEIKNGRLAM
Sbjct: 188 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAM 238



 Score = 34.7 bits (78), Expect = 3.0
 Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +3

Query: 69  DGSLPGDFGFDPLGLGS-EPELLKWFVQSEIVHCRWAMLGAAGIFIPEALTKAG 227
           D   PG   FDPLG GS  PE +K     EI + R AML   G +     T  G
Sbjct: 201 DVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTG 254


>tr|Q9SYW8|Q9SYW8_ARATH Lhca2 protein OS=Arabidopsis thaliana
           GN=Lhca2 PE=2 SV=1
          Length = 257

 Score =  327 bits (839), Expect = 2e-88
 Identities = 150/171 (87%), Positives = 157/171 (91%)
 Frame = +3

Query: 12  AAAADRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWAMLGAA 191
           AA  DRP+WFPGSTPPEWLDGSLPGDFGFDPLGL S+P+ LKW VQ+EIVHCRWAMLGAA
Sbjct: 47  AADPDRPIWFPGSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAA 106

Query: 192 GIFIPEALTKAGILNTPSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITPGSVN 371
           GIFIPE LTK GILNTPSWY+AGE EYFTD TTLFVVELI +GWAEGRRWADII PGSVN
Sbjct: 107 GIFIPEFLTKIGILNTPSWYTAGEQEYFTDKTTLFVVELILIGWAEGRRWADIIKPGSVN 166

Query: 372 TDPIFTNNKLTGTDVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAM 524
           TDP+F NNKLTGTDVGYPGG WFDPLGWGSGSP KLKELRTKEIKNGRLAM
Sbjct: 167 TDPVFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAM 217