DK946631 |
Clone id |
YMU02A01NGRL0013_D18 |
Library |
YMU02 |
Length |
591 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0013_D18. 5' end sequence. |
Accession |
DK946631 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL198Contig1 |
Sequence |
GAGGGCCCATCCACAGAGAGCTCGATCCCTGCTCCTCTGCGCGTTTCCTGTGACAATGGA TCGGCCCCCTCCTCTACTCGCCTCGCATTTGTCTATGGTACCCCCAAGCGTGGCTTTGGC AACCACTGGCTCGTGGAGGAGCTCATGGCCGGGTCACATGCACATTTCCTAGGATATGCT CTCACGAAGCGGCGCTTCCCCCTTGTCTGTGGCCCCTTCCAGGTGCCCTTTTTACTTCAC TCACCATCCCCTTCTGGTCATCACGTGCGCGGGGAGCTCTATCAAGTCGACTCGTTGGCC ATATCCAGACTTGATGAGCTCGAGGGTGTTGGTAAAGGTCATTATGAGCGCTGCCCAATT TATGTTCGGATAATCTCCCCATTGCTTGATGCTGATACCCATCCAAGGAATGGGGTTGCA GAAACTGATATGGAAACAAATCAGAATGATGTGGATCAAAGTAATGGGGCTATGGATGAT GCGGCATCATGCTGCACTCTTGCGGGGCCCTTATCATCTTGTAGAATGTACATGGAACCT CCTGAACCTGATGAAATAGACTCAATGTCGTCTTCTAATGAGGTTTCTGGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9M8T3 |
Definition |
sp|Q9M8T3|U131_ARATH UPF0131 protein At3g02910 OS=Arabidopsis thaliana |
Align length |
98 |
Score (bit) |
113.0 |
E-value |
8.0e-25 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK946631|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0013_D18, 5' (576 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9M8T3|U131_ARATH UPF0131 protein At3g02910 OS=Arabidopsis th... 113 8e-25 sp|Q9W0Y2|YS11_DROME UPF0131 protein CG2811 OS=Drosophila melano... 69 2e-11 sp|Q4KM86|A2LD1_RAT AIG2-like domain-containing protein 1 OS=Rat... 64 5e-10 sp|Q0VFX9|A2LD1_BOVIN AIG2-like domain-containing protein 1 OS=B... 58 4e-08 sp|Q923B0|A2LD1_MOUSE AIG2-like domain-containing protein 1 OS=M... 57 5e-08 sp|Q9BVM4|A2LD1_HUMAN AIG2-like domain-containing protein 1 OS=H... 56 1e-07 sp|A3KNL6|A2LDB_DANRE AIG2-like domain-containing protein 1-B OS... 53 1e-06 sp|Q66I06|A2LDA_DANRE AIG2-like domain-containing protein 1-A OS... 52 3e-06 sp|A0JMM9|A2LDC_DANRE AIG2-like domain-containing protein 1-C OS... 51 5e-06 sp|Q9W0Y1|TINA1_DROME Troponin C-akin-1 protein OS=Drosophila me... 47 7e-05 sp|Q58909|Y1514_METJA UPF0131 protein MJ1514 OS=Methanocaldococc... 44 4e-04 sp|Q66KX0|A2LD1_XENLA AIG2-like domain-containing protein 1 OS=X... 42 0.003 sp|Q9KP33|Y2546_VIBCH UPF0131 protein VC_2546 OS=Vibrio cholerae... 37 0.055 sp|Q0D519|FH13_ORYSJ Formin-like protein 13 OS=Oryza sativa subs... 31 3.9 sp|Q72E47|SYV_DESVH Valyl-tRNA synthetase OS=Desulfovibrio vulga... 31 3.9
>sp|Q9M8T3|U131_ARATH UPF0131 protein At3g02910 OS=Arabidopsis thaliana GN=At3g02910 PE=2 SV=1 Length = 182
Score = 113 bits (282), Expect = 8e-25 Identities = 54/98 (55%), Positives = 69/98 (70%) Frame = +1
Query: 67 PSSTRLAFVYGTPKRGFGNHWLVEELMAGSHAHFLGYALTKRRFPLVCGPFQVPFLLHSP 246 P++T L F YGT KRGF NH L+++L+ A F G T ++PLVCGP++VPFLL+ P Sbjct: 3 PATTTLVFTYGTLKRGFSNHVLMQDLIRSGDASFKGVYQTLDKYPLVCGPYRVPFLLNKP 62
Query: 247 SPSGHHVRGELYQVDSLAISRLDELEGVGKGHYERCPI 360 SG+HV GELY V +SRLDELEG+ +GHY R PI Sbjct: 63 G-SGYHVNGELYAVSPRGLSRLDELEGISRGHYIRQPI 99
>sp|Q9W0Y2|YS11_DROME UPF0131 protein CG2811 OS=Drosophila melanogaster GN=CG2811 PE=2 SV=2 Length = 157
Score = 68.9 bits (167), Expect = 2e-11 Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 2/81 (2%) Frame = +1
Query: 88 FVYGTPKRGFGNH-WLVEELMAGSHAHFLGYALTKRRFPLVCGP-FQVPFLLHSPSPSGH 261 FVYGT KRG NH WL ++ A FLG T+ +FPLV G + +PFLL P G+ Sbjct: 12 FVYGTLKRGEPNHHWLTKK--ENGQARFLGRGKTETKFPLVVGTRYNIPFLLARPG-EGN 68
Query: 262 HVRGELYQVDSLAISRLDELE 324 H+ GE+Y+VD +S+LD LE Sbjct: 69 HIEGEVYEVDETMLSKLDILE 89
>sp|Q4KM86|A2LD1_RAT AIG2-like domain-containing protein 1 OS=Rattus norvegicus GN=A2ld1 PE=2 SV=1 Length = 149
Score = 63.9 bits (154), Expect = 5e-10 Identities = 41/97 (42%), Positives = 54/97 (55%), Gaps = 1/97 (1%) Frame = +1
Query: 88 FVYGTPKRGFGNHWLVEELMAGSHAHFLGYALTKRRFPLV-CGPFQVPFLLHSPSPSGHH 264 FVYGT KRG NH ++ + G A F G T FPLV G +P+LLH P GH Sbjct: 5 FVYGTLKRGQPNHKVMLDQSHGL-ATFRGRGCTVESFPLVIAGEHNIPWLLHLPG-KGHC 62
Query: 265 VRGELYQVDSLAISRLDELEGVGKGHYERCPIYVRII 375 V GE+Y+VD + LD+ EG Y+R + VR++ Sbjct: 63 VAGEIYEVDEQMLRFLDDFEGC-PSMYQRTALQVRVL 98
>sp|Q0VFX9|A2LD1_BOVIN AIG2-like domain-containing protein 1 OS=Bos taurus GN=A2LD1 PE=2 SV=1 Length = 168
Score = 57.8 bits (138), Expect = 4e-08 Identities = 46/110 (41%), Positives = 60/110 (54%), Gaps = 5/110 (4%) Frame = +1
Query: 58 GSAPSSTRLA--FVYGTPKRGFGNHWLVEELMAGSH--AHFLGYALTKRRFPLV-CGPFQ 222 G+ SS RLA FVYGT K G NH + L+ G+H A F G A T +PLV G Sbjct: 18 GTDDSSGRLAPVFVYGTLKTGQPNHRV---LLDGAHGRAAFRGRAHTLEPYPLVIAGEHN 74
Query: 223 VPFLLHSPSPSGHHVRGELYQVDSLAISRLDELEGVGKGHYERCPIYVRI 372 +P LL+ P GH V GE+Y+VD + LDE E Y+R ++V + Sbjct: 75 IPRLLNLPG-RGHRVFGEVYEVDERMLRFLDEFESC-PDMYQRTRLHVAL 122
>sp|Q923B0|A2LD1_MOUSE AIG2-like domain-containing protein 1 OS=Mus musculus GN=a2ld1 PE=1 SV=1 Length = 149
Score = 57.4 bits (137), Expect = 5e-08 Identities = 40/104 (38%), Positives = 55/104 (52%), Gaps = 1/104 (0%) Frame = +1
Query: 88 FVYGTPKRGFGNHWLVEELMAGSHAHFLGYALTKRRFPLV-CGPFQVPFLLHSPSPSGHH 264 FVYGT KRG NH ++ + G A F G T FPLV G +P+LL+ P GH Sbjct: 5 FVYGTLKRGQPNHKVMLDHSHGLAA-FRGRGCTVESFPLVIAGEHNIPWLLYLPG-KGHC 62
Query: 265 VRGELYQVDSLAISRLDELEGVGKGHYERCPIYVRIISPLLDAD 396 V GE+Y+VD + LD+ E Y+R + V+++ D D Sbjct: 63 VTGEIYEVDEQMLRFLDDFEDC-PSMYQRTALQVQVLEWEGDGD 105
>sp|Q9BVM4|A2LD1_HUMAN AIG2-like domain-containing protein 1 OS=Homo sapiens GN=A2LD1 PE=2 SV=2 Length = 153
Score = 55.8 bits (133), Expect = 1e-07 Identities = 39/99 (39%), Positives = 53/99 (53%), Gaps = 1/99 (1%) Frame = +1
Query: 82 LAFVYGTPKRGFGNHWLVEELMAGSHAHFLGYALTKRRFPLV-CGPFQVPFLLHSPSPSG 258 L FVYGT KRG NH ++ + GS A F T +PLV G +P+LLH P SG Sbjct: 3 LVFVYGTLKRGQPNHRVLRDGAHGS-AAFRARGRTLEPYPLVIAGEHNIPWLLHLPG-SG 60
Query: 259 HHVRGELYQVDSLAISRLDELEGVGKGHYERCPIYVRII 375 V GE+Y VD + LD+ E Y+R + V+++ Sbjct: 61 RLVEGEVYAVDERMLRFLDDFESC-PALYQRTVLRVQLL 98
>sp|A3KNL6|A2LDB_DANRE AIG2-like domain-containing protein 1-B OS=Danio rerio GN=zgc:162208 PE=2 SV=1 Length = 152
Score = 52.8 bits (125), Expect = 1e-06 Identities = 38/98 (38%), Positives = 51/98 (52%), Gaps = 3/98 (3%) Frame = +1
Query: 73 STRLAFVYGTPKRGFGNHWLVEELMAGSH--AHFLGYALTKRRFPLVCG-PFQVPFLLHS 243 ST FVYG+ K+G NH EL+ ++ A F+ A TK +PLV +PFLL+ Sbjct: 2 STHHVFVYGSLKKGQPNH---HELLNSNNGQAEFITCAQTKEPYPLVIATKHNIPFLLNV 58
Query: 244 PSPSGHHVRGELYQVDSLAISRLDELEGVGKGHYERCP 357 P SG V GE+Y VD + LD +E+CP Sbjct: 59 PG-SGKQVSGEIYSVDQKMLEFLD--------WFEKCP 87
>sp|Q66I06|A2LDA_DANRE AIG2-like domain-containing protein 1-A OS=Danio rerio GN=zgc:92115 PE=2 SV=1 Length = 191
Score = 51.6 bits (122), Expect = 3e-06 Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 1/117 (0%) Frame = +1
Query: 82 LAFVYGTPKRGFGNHWLVEELMAGSHAHFLGYALTKRRFPLV-CGPFQVPFLLHSPSPSG 258 L FVYGT K+G N++ + + G A F+ A T +PLV G +PFLL+ P SG Sbjct: 3 LVFVYGTLKKGQPNYFRLIDSSNG-QAEFITCARTVEPYPLVITGECNIPFLLNVPG-SG 60
Query: 259 HHVRGELYQVDSLAISRLDELEGVGKGHYERCPIYVRIISPLLDADTHPRNGVAETD 429 V GE+Y VD + LD +E CP + + L+ + NG E + Sbjct: 61 QRVYGEIYSVDQKMLEFLD--------WFEECPDWYQ--RTLIQLEILKGNGETEVE 107
>sp|A0JMM9|A2LDC_DANRE AIG2-like domain-containing protein 1-C OS=Danio rerio GN=zgc:154024 PE=2 SV=1 Length = 161
Score = 50.8 bits (120), Expect = 5e-06 Identities = 39/99 (39%), Positives = 53/99 (53%), Gaps = 3/99 (3%) Frame = +1
Query: 88 FVYGTPKRGFGNHWLVEELMAGSH--AHFLGYALTKRRFPLVCGPF-QVPFLLHSPSPSG 258 FVYGT K+G N+ EL +H A F+ A TK +P+V + PFLL+ P SG Sbjct: 24 FVYGTLKKGQSNY---HELTNTTHGQAEFITCARTKDPYPMVIATKDKFPFLLNVPG-SG 79
Query: 259 HHVRGELYQVDSLAISRLDELEGVGKGHYERCPIYVRII 375 V GE+Y VD + LDE E Y+R I ++I+ Sbjct: 80 QQVYGEIYNVDQNMLDFLDEFEEC-PDLYQRTSIQLKIL 117
>sp|Q9W0Y1|TINA1_DROME Troponin C-akin-1 protein OS=Drosophila melanogaster GN=Tina-1 PE=2 SV=1 Length = 167
Score = 47.0 bits (110), Expect = 7e-05 Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 26/132 (19%) Frame = +1
Query: 88 FVYGTPKRGFGNHWLVEELMAGSHAHFLGYALTKRRFPLVCGP-FQVPFLLHSPSPSGHH 264 FVYG K G ++ ++ G A F A T ++ PLV + +PFLL+ P G++ Sbjct: 15 FVYGALKYGQPSNSILASSGNG-FAKFWCKATTTQKLPLVIATRYNIPFLLNKPGV-GYY 72
Query: 265 VRGELYQVDSLAISRLDELE---------------GVGKG----------HYERCPIYVR 369 V GE+Y+VD ++ LD LE GVG+G Y + +R Sbjct: 73 VTGEIYEVDDRMLNSLDNLEDCEEIYTREMHDMNIGVGEGTVPCWVYLLQKYPENLLSLR 132
Query: 370 IISPLLDADTHP 405 +S ++ THP Sbjct: 133 YLSSYENSTTHP 144
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TZP6 |
Definition |
tr|A9TZP6|A9TZP6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
92 |
Score (bit) |
131.0 |
E-value |
3.0e-29 |
Report |
|