DK946632 |
Clone id |
YMU02A01NGRL0013_D19 |
Library |
YMU02 |
Length |
519 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0013_D19. 5' end sequence. |
Accession |
DK946632 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL1484Contig1 |
Sequence |
CTCGCGCGCGCGCGCGCGCTCGGAAAGAAATGGGTTCAAGTTGAGCAGAAAGAAACAGAA AGAAAGCAGTCTGATGGTGCTCCAGCTTTTACCTCTGGGGTTTTTGGCGTGAGGGTACAG TCTGCGTCAAAGATGTCATCCACAAAGGAGCTTCAGCAACAGTTGGAACTTCGTGCTTCC GCTCTCAACAAGCTTCAGAAAGACATAGCTAAAAATCATCAAGTAAGACGCCAATATACG ATCCAACAGGGGGAAAATGAAATGGTGCAGAAGGAGCTCGAGTTGCTTGATGAAGACACA AATGTTTTTAAGCTTATTGGCCCAGTGCTTGTGAAACAAGACTTGGTGGAAGCCAAGGCA AATGTCAACAAGCGCATTGATTACATCACTGGAGAGTTAAGGCGTTTGGACAGCGTTCTG AAAGGTATGGAAGAGCAGCAAAATACCAAGAAAGATGAGGTAATCAAGCTTCAGCAGCGA ATTCAGGCCCTTCAGCCTGGAAAGGCAAGAGCTTGAGTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q17Q89 |
Definition |
sp|Q17Q89|PFD6_BOVIN Prefoldin subunit 6 OS=Bos taurus |
Align length |
121 |
Score (bit) |
103.0 |
E-value |
4.0e-22 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NPK3 |
Definition |
tr|A9NPK3|A9NPK3_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
124 |
Score (bit) |
190.0 |
E-value |
4.0e-47 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK946632|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0013_D19, 5' (519 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NPK3|A9NPK3_PICSI Putative uncharacterized protein OS=Picea... 190 4e-47 tr|A9T476|A9T476_PHYPA Predicted protein OS=Physcomitrella paten... 186 5e-46 tr|B6T5S0|B6T5S0_MAIZE Prefoldin subunit 6 OS=Zea mays PE=2 SV=1 170 4e-41 tr|Q2HIK4|Q2HIK4_ARATH At1g29990 OS=Arabidopsis thaliana PE=2 SV=1 169 6e-41 tr|Q8GYJ1|Q8GYJ1_ARATH Putative uncharacterized protein OS=Arabi... 168 1e-40 tr|A7QWI6|A7QWI6_VITVI Chromosome chr10 scaffold_204, whole geno... 166 8e-40 tr|Q6K3S8|Q6K3S8_ORYSJ Prefoldin-like OS=Oryza sativa subsp. jap... 152 7e-36 tr|B8AEY1|B8AEY1_ORYSI Putative uncharacterized protein OS=Oryza... 136 7e-31 tr|B6LCI0|B6LCI0_BRAFL Putative uncharacterized protein OS=Branc... 117 3e-25 tr|Q9C8S0|Q9C8S0_ARATH Hydrophilic protein, putative; 29542-3003... 114 2e-24 tr|A3A512|A3A512_ORYSJ Putative uncharacterized protein OS=Oryza... 110 3e-23 tr|A4RRI2|A4RRI2_OSTLU Predicted protein OS=Ostreococcus lucimar... 106 8e-22 tr|B3RNZ6|B3RNZ6_TRIAD Putative uncharacterized protein OS=Trich... 106 8e-22 tr|B7Q8B6|B7Q8B6_IXOSC Prefoldin, putative OS=Ixodes scapularis ... 105 2e-21 tr|Q0E2E9|Q0E2E9_ORYSJ Os02g0246300 protein OS=Oryza sativa subs... 104 2e-21 tr|B5XDP7|B5XDP7_SALSA Prefoldin subunit 6 OS=Salmo salar GN=PFD... 103 4e-21 tr|Q0IH09|Q0IH09_XENLA MGC154905 protein OS=Xenopus laevis GN=MG... 103 5e-21 tr|Q5STK2|Q5STK2_HUMAN Prefoldin subunit 6 OS=Homo sapiens GN=PF... 103 7e-21 tr|B5XFC5|B5XFC5_SALSA Prefoldin subunit 6 OS=Salmo salar GN=PFD... 102 9e-21 tr|Q7SX94|Q7SX94_DANRE Zgc:66282 OS=Danio rerio GN=zgc:66282 PE=... 102 1e-20 tr|Q5U5B8|Q5U5B8_XENLA LOC495306 protein OS=Xenopus laevis GN=LO... 102 1e-20 tr|Q792E4|Q792E4_MOUSE Putative uncharacterized protein OS=Mus m... 102 1e-20 tr|Q6MGC4|Q6MGC4_RAT H2-K region expressed gene 2, rat orthologu... 102 1e-20 tr|Q28CE5|Q28CE5_XENTR HLA class II region expressed gene KE2 (P... 101 3e-20 tr|A7T0K8|A7T0K8_NEMVE Predicted protein OS=Nematostella vectens... 101 3e-20 tr|Q55J48|Q55J48_CRYNE Putative uncharacterized protein OS=Crypt... 100 3e-20 tr|Q5DDY5|Q5DDY5_SCHJA SJCHGC06238 protein OS=Schistosoma japoni... 97 5e-19 tr|A8IJG5|A8IJG5_CHLRE Predicted protein OS=Chlamydomonas reinha... 94 3e-18 tr|A2I449|A2I449_MACHI Prefoldin subunit 6-like protein OS=Macon... 93 7e-18 tr|Q236K3|Q236K3_TETTH KE2 family protein OS=Tetrahymena thermop... 92 1e-17
>tr|A9NPK3|A9NPK3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 129
Score = 190 bits (482), Expect = 4e-47 Identities = 92/124 (74%), Positives = 110/124 (88%) Frame = +1
Query: 139 STKELQQQLELRASALNKLQKDIAKNHQVRRQYTIQQGENEMVQKELELLDEDTNVFKLI 318 + ++LQQQLE +A+ALNK++KDIAKNHQVR+QYTIQ GENEMVQKELELL ED NV+KLI Sbjct: 5 AVRDLQQQLENQANALNKIRKDIAKNHQVRKQYTIQHGENEMVQKELELLSEDANVYKLI 64
Query: 319 GPVLVKQDLVEAKANVNKRIDYITGELRRLDSVLKGMEEQQNTKKDEVIKLQQRIQALQP 498 GPVLVKQDL EA ANV KRI+YIT ELRR+D LKG+EEQQN KK+E++K+QQR+Q LQ Sbjct: 65 GPVLVKQDLAEANANVAKRIEYITAELRRMDGTLKGLEEQQNAKKEEILKIQQRLQVLQS 124
Query: 499 GKAR 510 GKA+ Sbjct: 125 GKAK 128
>tr|A9T476|A9T476_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_191469 PE=4 SV=1 Length = 130
Score = 186 bits (473), Expect = 5e-46 Identities = 92/124 (74%), Positives = 109/124 (87%) Frame = +1
Query: 136 SSTKELQQQLELRASALNKLQKDIAKNHQVRRQYTIQQGENEMVQKELELLDEDTNVFKL 315 S+ KELQ QLE +A++LNK+QKDI KNHQVRRQYT+Q GENEMVQKELELL++D NV+KL Sbjct: 3 SALKELQAQLENQAASLNKIQKDIGKNHQVRRQYTVQHGENEMVQKELELLEDDANVYKL 62
Query: 316 IGPVLVKQDLVEAKANVNKRIDYITGELRRLDSVLKGMEEQQNTKKDEVIKLQQRIQALQ 495 IGPVLVKQDL EAKANVNKR+DYIT EL+R+D+ LK MEEQQ K+DEV+K QQRIQA+Q Sbjct: 63 IGPVLVKQDLAEAKANVNKRLDYITAELKRMDATLKTMEEQQMAKRDEVMKTQQRIQAIQ 122
Query: 496 PGKA 507 +A Sbjct: 123 AAQA 126
>tr|B6T5S0|B6T5S0_MAIZE Prefoldin subunit 6 OS=Zea mays PE=2 SV=1 Length = 131
Score = 170 bits (430), Expect = 4e-41 Identities = 82/125 (65%), Positives = 108/125 (86%) Frame = +1
Query: 121 SASKMSSTKELQQQLELRASALNKLQKDIAKNHQVRRQYTIQQGENEMVQKELELLDEDT 300 S+S ++ +E+Q+ LE++A+AL+K+QKDIAKNHQVR+QYTIQ GENE+V KELELL + Sbjct: 4 SSSTPAAVREMQKDLEVQANALSKIQKDIAKNHQVRKQYTIQVGENELVLKELELLSDGA 63
Query: 301 NVFKLIGPVLVKQDLVEAKANVNKRIDYITGELRRLDSVLKGMEEQQNTKKDEVIKLQQR 480 NV+KLIGPVLVKQDL EAKANV KRI+YI+ EL+R+D LK +EE+QN+KK+ + KLQQR Sbjct: 64 NVYKLIGPVLVKQDLAEAKANVKKRIEYISAELKRMDRALKDLEEKQNSKKESIFKLQQR 123
Query: 481 IQALQ 495 +QA+Q Sbjct: 124 MQAVQ 128
>tr|Q2HIK4|Q2HIK4_ARATH At1g29990 OS=Arabidopsis thaliana PE=2 SV=1 Length = 129
Score = 169 bits (429), Expect = 6e-41 Identities = 80/126 (63%), Positives = 108/126 (85%) Frame = +1
Query: 136 SSTKELQQQLELRASALNKLQKDIAKNHQVRRQYTIQQGENEMVQKELELLDEDTNVFKL 315 S+ ++LQ+ LE +A+ L K+QKDI KNHQ+R++YTIQ GENE+V KEL+LL+ED NV+KL Sbjct: 4 STVRDLQRDLENKANDLGKIQKDIGKNHQLRKKYTIQLGENELVLKELDLLEEDANVYKL 63
Query: 316 IGPVLVKQDLVEAKANVNKRIDYITGELRRLDSVLKGMEEQQNTKKDEVIKLQQRIQALQ 495 IGPVLVKQDL EA ANV KRI+YI+ EL+RLD++L+ MEE+QN K++ ++KLQQR+Q +Q Sbjct: 64 IGPVLVKQDLAEANANVRKRIEYISAELKRLDAILQDMEEKQNNKRETIMKLQQRLQTIQ 123
Query: 496 PGKARA 513 GKA+A Sbjct: 124 AGKAKA 129
>tr|Q8GYJ1|Q8GYJ1_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 129
Score = 168 bits (426), Expect = 1e-40 Identities = 80/126 (63%), Positives = 107/126 (84%) Frame = +1
Query: 136 SSTKELQQQLELRASALNKLQKDIAKNHQVRRQYTIQQGENEMVQKELELLDEDTNVFKL 315 S+ ++LQ+ LE +A+ L K+QKDI KNHQ+R++YTIQ GENE+V KEL+LL+ED NV+KL Sbjct: 4 STVRDLQRDLENKANDLGKIQKDIGKNHQLRKKYTIQLGENELVLKELDLLEEDANVYKL 63
Query: 316 IGPVLVKQDLVEAKANVNKRIDYITGELRRLDSVLKGMEEQQNTKKDEVIKLQQRIQALQ 495 IGPVLVKQDL EA ANV KRI+YI+ EL+RLD +L+ MEE+QN K++ ++KLQQR+Q +Q Sbjct: 64 IGPVLVKQDLAEANANVRKRIEYISAELKRLDVILQDMEEKQNNKRETIMKLQQRLQTIQ 123
Query: 496 PGKARA 513 GKA+A Sbjct: 124 AGKAKA 129
>tr|A7QWI6|A7QWI6_VITVI Chromosome chr10 scaffold_204, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00008670001 PE=4 SV=1 Length = 141
Score = 166 bits (419), Expect = 8e-40 Identities = 87/140 (62%), Positives = 109/140 (77%), Gaps = 17/140 (12%) Frame = +1
Query: 145 KELQQQLELRASALNKLQK-----------------DIAKNHQVRRQYTIQQGENEMVQK 273 +ELQ++LE +A+ L+KLQK +I+KNHQVR++YTIQ GENE+V K Sbjct: 2 RELQRELETKANDLSKLQKGKLSTHALILALTLQSSNISKNHQVRKKYTIQLGENELVLK 61
Query: 274 ELELLDEDTNVFKLIGPVLVKQDLVEAKANVNKRIDYITGELRRLDSVLKGMEEQQNTKK 453 EL+LL ED NVFKLIGPVLVKQDL EA ANV KRIDYI+ EL+RLD+ L+ +EE+QN+KK Sbjct: 62 ELDLLREDANVFKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDATLQDLEEKQNSKK 121
Query: 454 DEVIKLQQRIQALQPGKARA 513 + V KLQQ+IQALQPGKA+A Sbjct: 122 EAVFKLQQKIQALQPGKAKA 141
>tr|Q6K3S8|Q6K3S8_ORYSJ Prefoldin-like OS=Oryza sativa subsp. japonica GN=OSJNBa0090H18.12 PE=4 SV=1 Length = 134
Score = 152 bits (385), Expect = 7e-36 Identities = 72/114 (63%), Positives = 99/114 (86%) Frame = +1
Query: 121 SASKMSSTKELQQQLELRASALNKLQKDIAKNHQVRRQYTIQQGENEMVQKELELLDEDT 300 S+S ++ +E+Q+ LE +A+AL+K+QKDI+KNHQVR+QYTIQ GENE+V KELEL++++ Sbjct: 7 SSSTPAAVREMQRDLESQANALSKIQKDISKNHQVRKQYTIQVGENELVLKELELVNDEA 66
Query: 301 NVFKLIGPVLVKQDLVEAKANVNKRIDYITGELRRLDSVLKGMEEQQNTKKDEV 462 NV+KLIGPVLVKQDL EAKANV KRI+YI+ EL+R+D LK +EE+QN+KK+ + Sbjct: 67 NVYKLIGPVLVKQDLAEAKANVKKRIEYISAELKRMDRALKDLEEKQNSKKESI 120
>tr|B8AEY1|B8AEY1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06548 PE=4 SV=1 Length = 138
Score = 136 bits (342), Expect = 7e-31 Identities = 72/138 (52%), Positives = 101/138 (73%), Gaps = 13/138 (9%) Frame = +1
Query: 121 SASKMSSTKELQQQLELRASALNKLQKD-------------IAKNHQVRRQYTIQQGENE 261 S+S ++ +E+Q+ LE +A+AL+K+QK I+KNHQVR+QYTIQ Sbjct: 7 SSSTPAAVREMQRDLESQANALSKIQKGTLETPPSPPLPSHISKNHQVRKQYTIQ----- 61
Query: 262 MVQKELELLDEDTNVFKLIGPVLVKQDLVEAKANVNKRIDYITGELRRLDSVLKGMEEQQ 441 ELEL++++ NV+KLIGPVLVKQDL EAKANV KRI+YI+ EL+R+D LK +EE+Q Sbjct: 62 ----ELELVNDEANVYKLIGPVLVKQDLAEAKANVKKRIEYISAELKRMDRALKDLEEKQ 117
Query: 442 NTKKDEVIKLQQRIQALQ 495 N+KK+ + KLQQ++QA+Q Sbjct: 118 NSKKESIFKLQQKMQAVQ 135
>tr|B6LCI0|B6LCI0_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_118933 PE=4 SV=1 Length = 127
Score = 117 bits (293), Expect = 3e-25 Identities = 59/127 (46%), Positives = 83/127 (65%) Frame = +1
Query: 133 MSSTKELQQQLELRASALNKLQKDIAKNHQVRRQYTIQQGENEMVQKELELLDEDTNVFK 312 M++ + ++ QLE + +QKD+ K R Q +Q EN +V+ ELELL+ D+NV+K Sbjct: 1 MAALETMRNQLEKKLKEFQGVQKDLQKTASTRSQLDVQLNENRIVKDELELLETDSNVYK 60
Query: 313 LIGPVLVKQDLVEAKANVNKRIDYITGELRRLDSVLKGMEEQQNTKKDEVIKLQQRIQAL 492 L GPVLVKQDL EAKANV KRI+YI GE++R D+ +K EE+Q + E+ LQQ+ Q Sbjct: 61 LTGPVLVKQDLEEAKANVGKRIEYIEGEIKRQDATIKDFEEKQEKSRKELTTLQQQFQQA 120
Query: 493 QPGKARA 513 Q +A Sbjct: 121 QAKAGKA 127
>tr|Q9C8S0|Q9C8S0_ARATH Hydrophilic protein, putative; 29542-30030 OS=Arabidopsis thaliana GN=T1P2.3 PE=4 SV=1 Length = 94
Score = 114 bits (286), Expect = 2e-24 Identities = 58/91 (63%), Positives = 74/91 (81%), Gaps = 3/91 (3%) Frame = +1
Query: 136 SSTKELQQQLELRASALNKLQKD---IAKNHQVRRQYTIQQGENEMVQKELELLDEDTNV 306 S+ ++LQ+ LE +A+ L K+QK I KNHQ+R++YTIQ GENE+V KEL+LL+ED NV Sbjct: 4 STVRDLQRDLENKANDLGKIQKGKFHIGKNHQLRKKYTIQLGENELVLKELDLLEEDANV 63
Query: 307 FKLIGPVLVKQDLVEAKANVNKRIDYITGEL 399 +KLIGPVLVKQDL EA ANV KRI+YI+ EL Sbjct: 64 YKLIGPVLVKQDLAEANANVRKRIEYISAEL 94
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