DK946643 |
Clone id |
YMU02A01NGRL0013_E10 |
Library |
YMU02 |
Length |
578 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0013_E10. 5' end sequence. |
Accession |
DK946643 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL67Contig1 |
Sequence |
GGGGCAAAGTCTTTTCGCGAAGCAGAGGAAGCGAAGTAGCATCCACGCTCTTGCGCTCTC TGCACAGAGAACTGCAAGATCCGTCGCCATGTATACTGCTCGGAGGAAGATCCACAAGGA GAAGGGGCTGGAGCCAGATGATTTTGAGGAGTCCGTTGCTCAGGCTCTTTTCGATCTGGA GAACTCAAACCAGGAATTGAAGAGTGACCTGCGAGACCTTTTCATCAACTCTGCCAAGCA GGTTGATATTTCAGGAAGCCGGAAGGCTGTTATCATCCACGTGCCTTACAGGCTCTGCAA AGCCTTCCGAAAAATTCACTCTCGTCTTGTCCGGGAGTTGGAGAAGAAGTTCAGTGGGAA GGATGTTATTATGATTGCCACTAGACGTATTTTGAGGCCTCCAAAGAAAGGGACGGCTGT AGCTCGCCCTCGTAATCGTACACTAACAGCTGTTCATGAAGCTATTCTCGAAGATTTGGT GTACCCGGCTGAGATTGTTGGAAAGCGAGTACGCTTCCGTCTGGATGGTTCAAGAATCAT GCGGGTGTATTTAGATCCAAAGGAAAGGAACAGCACTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9ZNS1 |
Definition |
sp|Q9ZNS1|RS7_AVIMR 40S ribosomal protein S7 OS=Avicennia marina |
Align length |
163 |
Score (bit) |
263.0 |
E-value |
6.0e-70 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9S5I8 |
Definition |
tr|A9S5I8|A9S5I8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
162 |
Score (bit) |
282.0 |
E-value |
8.0e-75 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK946643|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0013_E10, 5' (578 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9S5I8|A9S5I8_PHYPA Predicted protein OS=Physcomitrella paten... 282 8e-75 tr|A9T1N9|A9T1N9_PHYPA Predicted protein OS=Physcomitrella paten... 280 5e-74 tr|A9SXW3|A9SXW3_PHYPA Predicted protein OS=Physcomitrella paten... 277 3e-73 tr|A9TXW9|A9TXW9_PHYPA Predicted protein OS=Physcomitrella paten... 276 8e-73 tr|A9NQ60|A9NQ60_PICSI Putative uncharacterized protein OS=Picea... 276 8e-73 tr|B6SHM7|B6SHM7_MAIZE 40S ribosomal protein S7 OS=Zea mays PE=2... 270 6e-71 tr|B3TLX3|B3TLX3_ELAGV Ribosomal protein S7 OS=Elaeis guineensis... 268 2e-70 tr|B3TM44|B3TM44_ELAGV Ribosomal protein S7 OS=Elaeis guineensis... 267 3e-70 tr|Q10MS5|Q10MS5_ORYSJ Os03g0297100 protein OS=Oryza sativa subs... 265 2e-69 tr|Q10MS4|Q10MS4_ORYSJ 40S ribosomal protein S7, putative, expre... 265 2e-69 tr|B4FZN6|B4FZN6_MAIZE 40S ribosomal protein S7 OS=Zea mays PE=2... 265 2e-69 tr|A2XFL9|A2XFL9_ORYSI Putative uncharacterized protein OS=Oryza... 265 2e-69 tr|A2XFL8|A2XFL8_ORYSI Putative uncharacterized protein OS=Oryza... 265 2e-69 tr|B8AX04|B8AX04_ORYSI Putative uncharacterized protein OS=Oryza... 262 9e-69 tr|Q5I7K2|Q5I7K2_WHEAT Ribosomal protein S7 OS=Triticum aestivum... 261 2e-68 tr|B7FMQ4|B7FMQ4_MEDTR Putative uncharacterized protein OS=Medic... 261 2e-68 tr|B6TE31|B6TE31_MAIZE 40S ribosomal protein S7 OS=Zea mays PE=2... 261 2e-68 tr|Q3HRX6|Q3HRX6_SOLTU Putative uncharacterized protein (40S rib... 261 3e-68 tr|A5AWN5|A5AWN5_VITVI Putative uncharacterized protein (Chromos... 261 3e-68 tr|B7FGT0|B7FGT0_MEDTR Putative uncharacterized protein OS=Medic... 260 3e-68 tr|Q0DIZ8|Q0DIZ8_ORYSJ Os05g0346300 protein OS=Oryza sativa subs... 260 4e-68 tr|A5AFQ8|A5AFQ8_VITVI Putative uncharacterized protein (Chromos... 260 4e-68 tr|A9PBS2|A9PBS2_POPTR Putative uncharacterized protein OS=Popul... 256 6e-67 tr|Q2EHP5|Q2EHP5_POPCA Putative 40S ribosomal protein S7 (Fragme... 256 8e-67 tr|A9PCT6|A9PCT6_POPTR Putative uncharacterized protein OS=Popul... 256 8e-67 tr|A9PBB9|A9PBB9_POPTR Putative uncharacterized protein OS=Popul... 255 1e-66 tr|A9PEW2|A9PEW2_POPTR Putative uncharacterized protein OS=Popul... 254 2e-66 tr|Q1KUM0|Q1KUM0_9ROSI Putative uncharacterized protein OS=Cleom... 253 4e-66 tr|Q1KUR6|Q1KUR6_9ROSI Putative uncharacterized protein OS=Cleom... 253 5e-66 tr|A9PBV3|A9PBV3_POPTR Putative uncharacterized protein OS=Popul... 252 1e-65
>tr|A9S5I8|A9S5I8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_208894 PE=4 SV=1 Length = 195
Score = 282 bits (722), Expect = 8e-75 Identities = 140/162 (86%), Positives = 157/162 (96%) Frame = +2
Query: 92 YTARRKIHKEKGLEPDDFEESVAQALFDLENSNQELKSDLRDLFINSAKQVDISGSRKAV 271 +TARRKI KEKG EPD+FEESVAQALFDLE++N ELKS+LRDLFINSAK+VD+SG+RKAV Sbjct: 3 FTARRKIQKEKGQEPDEFEESVAQALFDLESTNSELKSELRDLFINSAKEVDVSGNRKAV 62
Query: 272 IIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLTA 451 +IHVPYRL KAF+KIH+RLVRELEKKFSGKDVI+IATRRILRPPKKG+AV RPR+RTLTA Sbjct: 63 VIHVPYRLRKAFQKIHARLVRELEKKFSGKDVIVIATRRILRPPKKGSAVNRPRSRTLTA 122
Query: 452 VHEAILEDLVYPAEIVGKRVRFRLDGSRIMRVYLDPKERNST 577 VHEA+LEDLVYP+EIVGKRVR+RLDGSRIMRVYLDPKERNST Sbjct: 123 VHEAVLEDLVYPSEIVGKRVRYRLDGSRIMRVYLDPKERNST 164
>tr|A9T1N9|A9T1N9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_86905 PE=4 SV=1 Length = 195
Score = 280 bits (715), Expect = 5e-74 Identities = 138/162 (85%), Positives = 156/162 (96%) Frame = +2
Query: 92 YTARRKIHKEKGLEPDDFEESVAQALFDLENSNQELKSDLRDLFINSAKQVDISGSRKAV 271 +TARRKI KEKG EPD+FEESVAQALFDLE++N ELKS+LRDLFINSAK+VD+SG+RKAV Sbjct: 3 FTARRKIQKEKGQEPDEFEESVAQALFDLESTNSELKSELRDLFINSAKEVDVSGNRKAV 62
Query: 272 IIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLTA 451 IIHVPYRL KAF+KIH+RLVRELEKKFSGKDV++IATRRILRPPKKG+AV RPR+RTLT Sbjct: 63 IIHVPYRLRKAFQKIHARLVRELEKKFSGKDVVVIATRRILRPPKKGSAVNRPRSRTLTT 122
Query: 452 VHEAILEDLVYPAEIVGKRVRFRLDGSRIMRVYLDPKERNST 577 VHEA+LEDLVYP+EIVGKRVR+RLDGSRIMRVYLDPKERN+T Sbjct: 123 VHEAVLEDLVYPSEIVGKRVRYRLDGSRIMRVYLDPKERNTT 164
>tr|A9SXW3|A9SXW3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_234408 PE=4 SV=1 Length = 195
Score = 277 bits (709), Expect = 3e-73 Identities = 137/162 (84%), Positives = 157/162 (96%) Frame = +2
Query: 92 YTARRKIHKEKGLEPDDFEESVAQALFDLENSNQELKSDLRDLFINSAKQVDISGSRKAV 271 +TARRKI KEKG EPD+FEESVAQALFDLE+++ ELKS+LRDLFINSAK+VD+SG+RKAV Sbjct: 3 FTARRKIQKEKGQEPDEFEESVAQALFDLESTSSELKSELRDLFINSAKEVDVSGNRKAV 62
Query: 272 IIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLTA 451 IIHVPYRL KAF+KIH+RLVRELEKKFSGKDV++IATRRILRPPKKG+AV RPR+RTLTA Sbjct: 63 IIHVPYRLRKAFQKIHARLVRELEKKFSGKDVVIIATRRILRPPKKGSAVNRPRSRTLTA 122
Query: 452 VHEAILEDLVYPAEIVGKRVRFRLDGSRIMRVYLDPKERNST 577 VHEA+LEDLV+P+EIVGKRVR+RLDGSRIMRVYLDPKERN+T Sbjct: 123 VHEAVLEDLVHPSEIVGKRVRYRLDGSRIMRVYLDPKERNTT 164
>tr|A9TXW9|A9TXW9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_172596 PE=4 SV=1 Length = 195
Score = 276 bits (705), Expect = 8e-73 Identities = 136/162 (83%), Positives = 154/162 (95%) Frame = +2
Query: 92 YTARRKIHKEKGLEPDDFEESVAQALFDLENSNQELKSDLRDLFINSAKQVDISGSRKAV 271 +TARRKI KE G EPD+FEESVAQALFDLE++N ELKS+LRDLFINSAK+VD+SG+RKAV Sbjct: 3 FTARRKIQKENGQEPDEFEESVAQALFDLESTNSELKSELRDLFINSAKEVDVSGNRKAV 62
Query: 272 IIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLTA 451 IIHVP+RL KAF+KIH+RLVRELEKKFSGKDV+ I TRRILRPPKKG+AV RPR+RTLTA Sbjct: 63 IIHVPFRLRKAFQKIHARLVRELEKKFSGKDVVFIVTRRILRPPKKGSAVNRPRSRTLTA 122
Query: 452 VHEAILEDLVYPAEIVGKRVRFRLDGSRIMRVYLDPKERNST 577 VHEA+LEDLVYP+EIVGKR+R+RLDGSRIMRVYLDPKERNST Sbjct: 123 VHEAVLEDLVYPSEIVGKRMRYRLDGSRIMRVYLDPKERNST 164
>tr|A9NQ60|A9NQ60_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 192
Score = 276 bits (705), Expect = 8e-73 Identities = 135/163 (82%), Positives = 154/163 (94%) Frame = +2
Query: 89 MYTARRKIHKEKGLEPDDFEESVAQALFDLENSNQELKSDLRDLFINSAKQVDISGSRKA 268 MYTARRKI KEK EP++FEESVAQALFDLE++NQELKS+L+DLFINSA Q DISG+RKA Sbjct: 1 MYTARRKIQKEKNAEPNEFEESVAQALFDLESTNQELKSELKDLFINSASQYDISGNRKA 60
Query: 269 VIIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLT 448 V++HVPYRL KAFRKIH RLVRELEKKFSGKDV++IATRRI+RPPKKG+A RPR+RTLT Sbjct: 61 VVVHVPYRLRKAFRKIHVRLVRELEKKFSGKDVVVIATRRIVRPPKKGSAAVRPRSRTLT 120
Query: 449 AVHEAILEDLVYPAEIVGKRVRFRLDGSRIMRVYLDPKERNST 577 AVHEAILEDLVYPAEIVGKRVR+RLDGS+IM++YLDPKERN+T Sbjct: 121 AVHEAILEDLVYPAEIVGKRVRYRLDGSKIMKIYLDPKERNNT 163
>tr|B6SHM7|B6SHM7_MAIZE 40S ribosomal protein S7 OS=Zea mays PE=2 SV=1 Length = 192
Score = 270 bits (689), Expect = 6e-71 Identities = 129/163 (79%), Positives = 153/163 (93%) Frame = +2
Query: 89 MYTARRKIHKEKGLEPDDFEESVAQALFDLENSNQELKSDLRDLFINSAKQVDISGSRKA 268 MYTAR+KI KEKGLEP +FE+SVAQA FDLEN NQELKSDL+DL+IN+A Q+D++GSRKA Sbjct: 1 MYTARKKIQKEKGLEPSEFEDSVAQAFFDLENGNQELKSDLKDLYINNAIQMDVTGSRKA 60
Query: 269 VIIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLT 448 V+IHVPYRL KAFRKIH RLVRELEKKFSGKDV+++ATRRI+RPPKKG+AV RPR RTLT Sbjct: 61 VVIHVPYRLRKAFRKIHVRLVRELEKKFSGKDVVIVATRRIVRPPKKGSAVLRPRTRTLT 120
Query: 449 AVHEAILEDLVYPAEIVGKRVRFRLDGSRIMRVYLDPKERNST 577 AVH+ ILED+VYPAEIVGKRVR+RLDGS+I++++LDPKERN+T Sbjct: 121 AVHDGILEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNT 163
>tr|B3TLX3|B3TLX3_ELAGV Ribosomal protein S7 OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 191
Score = 268 bits (685), Expect = 2e-70 Identities = 129/163 (79%), Positives = 153/163 (93%) Frame = +2
Query: 89 MYTARRKIHKEKGLEPDDFEESVAQALFDLENSNQELKSDLRDLFINSAKQVDISGSRKA 268 MYTAR+KI KEK +EP +FEE VAQALFDLEN+NQELKSDL+DL+INSA Q+D++G+RKA Sbjct: 1 MYTARKKIQKEKDVEPTEFEEIVAQALFDLENTNQELKSDLKDLYINSAVQIDVAGNRKA 60
Query: 269 VIIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLT 448 V+IHVPYRL KAFRKIH RLVRE+EKKFSGKDVI IATRRILRPPKKG+AV RPR+RTLT Sbjct: 61 VVIHVPYRLRKAFRKIHVRLVREMEKKFSGKDVIFIATRRILRPPKKGSAVVRPRSRTLT 120
Query: 449 AVHEAILEDLVYPAEIVGKRVRFRLDGSRIMRVYLDPKERNST 577 VHEA+LED+VYPAEIVGKR+R+RLDGS+I++++LDPKERN+T Sbjct: 121 HVHEAMLEDIVYPAEIVGKRIRYRLDGSKIIKIFLDPKERNNT 163
>tr|B3TM44|B3TM44_ELAGV Ribosomal protein S7 OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 189
Score = 267 bits (683), Expect = 3e-70 Identities = 127/163 (77%), Positives = 154/163 (94%) Frame = +2
Query: 89 MYTARRKIHKEKGLEPDDFEESVAQALFDLENSNQELKSDLRDLFINSAKQVDISGSRKA 268 M+TAR+KI K+K LEP +FEESVAQALFDLEN+NQELKSDLRDL+INSA Q+D++G+RKA Sbjct: 1 MFTARKKIQKDKDLEPSEFEESVAQALFDLENNNQELKSDLRDLYINSAVQMDVAGNRKA 60
Query: 269 VIIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLT 448 V+IH+PYRL KA+RKIH RLVRELEKKFSGKDVI+IATRRILRPPKKG+A+ RPR+RTLT Sbjct: 61 VVIHIPYRLRKAYRKIHVRLVRELEKKFSGKDVILIATRRILRPPKKGSAIVRPRSRTLT 120
Query: 449 AVHEAILEDLVYPAEIVGKRVRFRLDGSRIMRVYLDPKERNST 577 AVH+A LED+VYPAEIVGKR+R+ LDGS+I++++LDPKERN+T Sbjct: 121 AVHDATLEDVVYPAEIVGKRIRYHLDGSKIIKIFLDPKERNTT 163
>tr|Q10MS5|Q10MS5_ORYSJ Os03g0297100 protein OS=Oryza sativa subsp. japonica GN=Os03g0297100 PE=2 SV=1 Length = 192
Score = 265 bits (676), Expect = 2e-69 Identities = 124/163 (76%), Positives = 153/163 (93%) Frame = +2
Query: 89 MYTARRKIHKEKGLEPDDFEESVAQALFDLENSNQELKSDLRDLFINSAKQVDISGSRKA 268 MYTAR+KI KEKGLEP +FE+SVAQA FDLEN NQELKS+L+DL+IN+A Q+DI+G+RKA Sbjct: 1 MYTARKKIQKEKGLEPSEFEDSVAQAFFDLENGNQELKSELKDLYINNAVQMDIAGNRKA 60
Query: 269 VIIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLT 448 V+IHVPYRL KAF+KIH RLVRELEKKFSGKDV+++ATRRI+RPPKKG+AV RPR RTLT Sbjct: 61 VVIHVPYRLRKAFKKIHVRLVRELEKKFSGKDVVIVATRRIVRPPKKGSAVQRPRTRTLT 120
Query: 449 AVHEAILEDLVYPAEIVGKRVRFRLDGSRIMRVYLDPKERNST 577 AVH+ ILED+VYPAEIVGKR+R+RLDG+++++++LDPKERN+T Sbjct: 121 AVHDGILEDVVYPAEIVGKRIRYRLDGAKVIKIFLDPKERNNT 163
>tr|Q10MS4|Q10MS4_ORYSJ 40S ribosomal protein S7, putative, expressed (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=LOC_Os03g18580 PE=4 SV=1 Length = 192
Score = 265 bits (676), Expect = 2e-69 Identities = 124/163 (76%), Positives = 153/163 (93%) Frame = +2
Query: 89 MYTARRKIHKEKGLEPDDFEESVAQALFDLENSNQELKSDLRDLFINSAKQVDISGSRKA 268 MYTAR+KI KEKGLEP +FE+SVAQA FDLEN NQELKS+L+DL+IN+A Q+DI+G+RKA Sbjct: 1 MYTARKKIQKEKGLEPSEFEDSVAQAFFDLENGNQELKSELKDLYINNAVQMDIAGNRKA 60
Query: 269 VIIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLT 448 V+IHVPYRL KAF+KIH RLVRELEKKFSGKDV+++ATRRI+RPPKKG+AV RPR RTLT Sbjct: 61 VVIHVPYRLRKAFKKIHVRLVRELEKKFSGKDVVIVATRRIVRPPKKGSAVQRPRTRTLT 120
Query: 449 AVHEAILEDLVYPAEIVGKRVRFRLDGSRIMRVYLDPKERNST 577 AVH+ ILED+VYPAEIVGKR+R+RLDG+++++++LDPKERN+T Sbjct: 121 AVHDCILEDVVYPAEIVGKRIRYRLDGAKVIKIFLDPKERNNT 163
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