DK946647 |
Clone id |
YMU02A01NGRL0013_E14 |
Library |
YMU02 |
Length |
576 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0013_E14. 5' end sequence. |
Accession |
DK946647 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL77Contig1 |
Sequence |
CTCTCTGCGAACGGGGTCCCGAGAAGTGGTCGCTTCGTCCCCAGCTTCTTTCGAGCTCCA CCGGCGCCATGGTGAAATACTCCAGGGAGCCTGATAATATCGCAAAAGCTTGTAAGTCTA GAGGTTCTGACCTCCGTGTGCACTTTAAGAACACCCGCGAGGCAGCACAAGCAATCAAGA AACTTGACCTTGCAAAGGCCAAAAGGTATTTGGAAGATGTGGTGGCCCACAAGCAGGCTA TCCCTTTCCGCCGTTTCTGTGGTGGCGTCGGTAGAACAGCCCAAGCAAAGGCCCGCCATT CTAATGGGCAGGGTAGGTGGCCTGTGAAGTCCGCCCAGTTCCTTCTAGGTTTGCTGAAAA ATGCTGAGAGCAATGCAGAGACAAAGGGGCTGGATGTAGATACACTGTATGTTTCTCACA TTCAGGTCAACAAGGCTCAGAAGCAGAGGAGACGTACCTACCGTGCCCACGGTCGCATCA ATCCGTACATGTCTTCCCCTTGCCACATTGAGTTAATTCTTGCTGAGAAGGAAGCCCCTG TGAAGAAAGAGGCGGAGTCTTCAGGAAAGCGGCCTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q93VI3 |
Definition |
sp|Q93VI3|RL171_ARATH 60S ribosomal protein L17-1 OS=Arabidopsis thaliana |
Align length |
151 |
Score (bit) |
265.0 |
E-value |
9.0e-71 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SN83 |
Definition |
tr|A9SN83|A9SN83_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
151 |
Score (bit) |
283.0 |
E-value |
6.0e-75 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK946647|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0013_E14, 5' (561 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SN83|A9SN83_PHYPA Predicted protein OS=Physcomitrella paten... 283 6e-75 tr|A9TXV0|A9TXV0_PHYPA Predicted protein (Fragment) OS=Physcomit... 282 8e-75 tr|A9SN82|A9SN82_PHYPA Predicted protein (Fragment) OS=Physcomit... 281 1e-74 tr|A9S035|A9S035_PHYPA Predicted protein (Fragment) OS=Physcomit... 281 2e-74 tr|A9NT14|A9NT14_PICSI Putative uncharacterized protein OS=Picea... 280 5e-74 tr|A9NYW9|A9NYW9_PICSI Putative uncharacterized protein OS=Picea... 278 1e-73 tr|A9NT26|A9NT26_PICSI Putative uncharacterized protein OS=Picea... 278 1e-73 tr|A9RQX8|A9RQX8_PHYPA Predicted protein OS=Physcomitrella paten... 276 7e-73 tr|A7PHG3|A7PHG3_VITVI Chromosome chr17 scaffold_16, whole genom... 272 1e-71 tr|A9PJV5|A9PJV5_POPJC Putative uncharacterized protein OS=Popul... 270 5e-71 tr|A9PA96|A9PA96_POPTR Putative uncharacterized protein OS=Popul... 270 5e-71 tr|A5B412|A5B412_VITVI Putative uncharacterized protein OS=Vitis... 270 5e-71 tr|A9PE02|A9PE02_POPTR Putative uncharacterized protein OS=Popul... 268 1e-70 tr|A9PBU5|A9PBU5_POPTR Putative uncharacterized protein OS=Popul... 268 2e-70 tr|A7QP85|A7QP85_VITVI Chromosome chr1 scaffold_136, whole genom... 268 2e-70 tr|B3TM08|B3TM08_ELAGV Ribosomal protein OS=Elaeis guineensis va... 267 3e-70 tr|Q947H2|Q947H2_PETHY Ribosomal protein OS=Petunia hybrida GN=P... 266 4e-70 tr|B3TM07|B3TM07_ELAGV Ribosomal protein L17 OS=Elaeis guineensi... 266 4e-70 tr|Q307X7|Q307X7_SOLTU Ribosomal protein PETRP-like OS=Solanum t... 265 2e-69 tr|B6T595|B6T595_MAIZE 60S ribosomal protein L17 OS=Zea mays PE=... 265 2e-69 tr|A9PCW9|A9PCW9_POPTR Putative uncharacterized protein OS=Popul... 265 2e-69 tr|Q0WRE5|Q0WRE5_ARATH Ribosomal protein L17-like protein OS=Ara... 264 2e-69 tr|A7QP86|A7QP86_VITVI Chromosome chr1 scaffold_136, whole genom... 264 2e-69 tr|Q6K1W6|Q6K1W6_ORYSJ Os09g0258600 protein OS=Oryza sativa subs... 263 4e-69 tr|A2YZ23|A2YZ23_ORYSI Putative uncharacterized protein OS=Oryza... 263 4e-69 tr|B4FHE4|B4FHE4_MAIZE Putative uncharacterized protein OS=Zea m... 263 5e-69 tr|B4FNT0|B4FNT0_MAIZE Putative uncharacterized protein OS=Zea m... 263 6e-69 tr|B6UDY2|B6UDY2_MAIZE 60S ribosomal protein L17 OS=Zea mays PE=... 262 1e-68 tr|B6T1L4|B6T1L4_MAIZE 60S ribosomal protein L17 OS=Zea mays PE=... 261 1e-68 tr|B6SJH2|B6SJH2_MAIZE 60S ribosomal protein L17 OS=Zea mays PE=... 261 2e-68
>tr|A9SN83|A9SN83_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_165821 PE=3 SV=1 Length = 186
Score = 283 bits (723), Expect = 6e-75 Identities = 137/151 (90%), Positives = 144/151 (95%) Frame = +3
Query: 69 MVKYSREPDNIAKACKSRGSDLRVHFKNTREAAQAIKKLDLAKAKRYLEDVVAHKQAIPF 248 MVKY+R+PDN KACK+RGSDLRVHFKNTREAAQAIK ++LAKAKRYLEDV AHKQA+PF Sbjct: 1 MVKYARDPDNSTKACKARGSDLRVHFKNTREAAQAIKHMELAKAKRYLEDVCAHKQAVPF 60
Query: 249 RRFCGGVGRTAQAKARHSNGQGRWPVKSAQFLLGLLKNAESNAETKGLDVDTLYVSHIQV 428 RRFCGGVGRTAQAKARHSNGQGRWPVKSA FLLGLLKNAESNAE KGLDVDTL VSHIQV Sbjct: 61 RRFCGGVGRTAQAKARHSNGQGRWPVKSATFLLGLLKNAESNAEVKGLDVDTLVVSHIQV 120
Query: 429 NKAQKQRRRTYRAHGRINPYMSSPCHIELIL 521 N+AQKQRRRTYRAHGRINPYMSSPCHIELIL Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELIL 151
>tr|A9TXV0|A9TXV0_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_152415 PE=3 SV=1 Length = 190
Score = 282 bits (722), Expect = 8e-75 Identities = 137/150 (91%), Positives = 143/150 (95%) Frame = +3
Query: 72 VKYSREPDNIAKACKSRGSDLRVHFKNTREAAQAIKKLDLAKAKRYLEDVVAHKQAIPFR 251 VKY+REPDN KACK+RGSDLRVHFKNTREAAQAIK ++LAKAKRYLEDV AHKQAIPFR Sbjct: 2 VKYAREPDNATKACKARGSDLRVHFKNTREAAQAIKHMELAKAKRYLEDVCAHKQAIPFR 61
Query: 252 RFCGGVGRTAQAKARHSNGQGRWPVKSAQFLLGLLKNAESNAETKGLDVDTLYVSHIQVN 431 RFCGGVGRTAQAKARHSNGQGRWPVKSA FLLGLLKNAESNAE KGLDVDTL VSHIQVN Sbjct: 62 RFCGGVGRTAQAKARHSNGQGRWPVKSATFLLGLLKNAESNAEVKGLDVDTLVVSHIQVN 121
Query: 432 KAQKQRRRTYRAHGRINPYMSSPCHIELIL 521 +AQKQRRRTYRAHGRINPYMSSPCHIEL+L Sbjct: 122 QAQKQRRRTYRAHGRINPYMSSPCHIELVL 151
>tr|A9SN82|A9SN82_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_132604 PE=3 SV=1 Length = 229
Score = 281 bits (720), Expect = 1e-74 Identities = 137/150 (91%), Positives = 143/150 (95%) Frame = +3
Query: 72 VKYSREPDNIAKACKSRGSDLRVHFKNTREAAQAIKKLDLAKAKRYLEDVVAHKQAIPFR 251 VKY+R+PDN KACK+RGSDLRVHFKNTREAAQAIK ++LAKAKRYLEDV AHKQAIPFR Sbjct: 1 VKYARDPDNATKACKARGSDLRVHFKNTREAAQAIKHMELAKAKRYLEDVCAHKQAIPFR 60
Query: 252 RFCGGVGRTAQAKARHSNGQGRWPVKSAQFLLGLLKNAESNAETKGLDVDTLYVSHIQVN 431 RFCGGVGRTAQAKARHSNGQGRWPVKSA FLLGLLKNAESNAE KGLDVDTL VSHIQVN Sbjct: 61 RFCGGVGRTAQAKARHSNGQGRWPVKSATFLLGLLKNAESNAEVKGLDVDTLVVSHIQVN 120
Query: 432 KAQKQRRRTYRAHGRINPYMSSPCHIELIL 521 +AQKQRRRTYRAHGRINPYMSSPCHIELIL Sbjct: 121 QAQKQRRRTYRAHGRINPYMSSPCHIELIL 150
>tr|A9S035|A9S035_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_122013 PE=3 SV=1 Length = 174
Score = 281 bits (719), Expect = 2e-74 Identities = 137/150 (91%), Positives = 143/150 (95%) Frame = +3
Query: 72 VKYSREPDNIAKACKSRGSDLRVHFKNTREAAQAIKKLDLAKAKRYLEDVVAHKQAIPFR 251 VKY+R+PDN KACK+RGSDLRVHFKNTREAAQAIK ++LAKAKRYLEDV AHKQAIPFR Sbjct: 2 VKYARDPDNSTKACKARGSDLRVHFKNTREAAQAIKHMELAKAKRYLEDVCAHKQAIPFR 61
Query: 252 RFCGGVGRTAQAKARHSNGQGRWPVKSAQFLLGLLKNAESNAETKGLDVDTLYVSHIQVN 431 RFCGGVGRTAQAKARHSNGQGRWPVKSA FLLGLLKNAESNAE KGLDVDTL VSHIQVN Sbjct: 62 RFCGGVGRTAQAKARHSNGQGRWPVKSATFLLGLLKNAESNAEVKGLDVDTLVVSHIQVN 121
Query: 432 KAQKQRRRTYRAHGRINPYMSSPCHIELIL 521 +AQKQRRRTYRAHGRINPYMSSPCHIELIL Sbjct: 122 QAQKQRRRTYRAHGRINPYMSSPCHIELIL 151
>tr|A9NT14|A9NT14_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 183
Score = 280 bits (715), Expect = 5e-74 Identities = 135/151 (89%), Positives = 142/151 (94%) Frame = +3
Query: 69 MVKYSREPDNIAKACKSRGSDLRVHFKNTREAAQAIKKLDLAKAKRYLEDVVAHKQAIPF 248 MVKYSREPDN K+CK+RGSDLRVHFKNTRE AQA+KKL LAKAK YLEDV+AHKQAIPF Sbjct: 1 MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAQAVKKLPLAKAKAYLEDVLAHKQAIPF 60
Query: 249 RRFCGGVGRTAQAKARHSNGQGRWPVKSAQFLLGLLKNAESNAETKGLDVDTLYVSHIQV 428 RRFCGGVGRTAQAK+RHSNGQGRWPVKS QFLL LLKNAESNAE KGLDVD LY+SHIQV Sbjct: 61 RRFCGGVGRTAQAKSRHSNGQGRWPVKSVQFLLQLLKNAESNAEVKGLDVDALYISHIQV 120
Query: 429 NKAQKQRRRTYRAHGRINPYMSSPCHIELIL 521 N+AQKQRRRTYRAHGRINPYMSSPCHIELIL Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELIL 151
>tr|A9NYW9|A9NYW9_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 183
Score = 278 bits (712), Expect = 1e-73 Identities = 134/151 (88%), Positives = 142/151 (94%) Frame = +3
Query: 69 MVKYSREPDNIAKACKSRGSDLRVHFKNTREAAQAIKKLDLAKAKRYLEDVVAHKQAIPF 248 MVKYSREPDN K+CK+RGSDLRVHFKNTRE AQA+KKL +AKAK YLEDV+AHKQAIPF Sbjct: 1 MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAQAVKKLPVAKAKAYLEDVLAHKQAIPF 60
Query: 249 RRFCGGVGRTAQAKARHSNGQGRWPVKSAQFLLGLLKNAESNAETKGLDVDTLYVSHIQV 428 RRFCGGVGRTAQAK+RHSNGQGRWPVKS QFLL LLKNAESNAE KGLDVD LY+SHIQV Sbjct: 61 RRFCGGVGRTAQAKSRHSNGQGRWPVKSVQFLLQLLKNAESNAEVKGLDVDALYISHIQV 120
Query: 429 NKAQKQRRRTYRAHGRINPYMSSPCHIELIL 521 N+AQKQRRRTYRAHGRINPYMSSPCHIELIL Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELIL 151
>tr|A9NT26|A9NT26_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 183
Score = 278 bits (711), Expect = 1e-73 Identities = 134/151 (88%), Positives = 143/151 (94%) Frame = +3
Query: 69 MVKYSREPDNIAKACKSRGSDLRVHFKNTREAAQAIKKLDLAKAKRYLEDVVAHKQAIPF 248 MVKYSREP N K+ K+RGSDLRVHFKNTRE AQA+KKL L KAKRYLEDV+AHKQAIPF Sbjct: 1 MVKYSREPGNPTKSAKARGSDLRVHFKNTRETAQAVKKLSLTKAKRYLEDVIAHKQAIPF 60
Query: 249 RRFCGGVGRTAQAKARHSNGQGRWPVKSAQFLLGLLKNAESNAETKGLDVDTLYVSHIQV 428 RRFCGGVGRTAQAK+R+SNGQGRWPVKSA+FLLGLLKNAESNAE KGLDVDTLY+SHIQV Sbjct: 61 RRFCGGVGRTAQAKSRNSNGQGRWPVKSAEFLLGLLKNAESNAEVKGLDVDTLYISHIQV 120
Query: 429 NKAQKQRRRTYRAHGRINPYMSSPCHIELIL 521 N+AQKQRRRTYRAHGRINPYMSSPCHIELIL Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELIL 151
>tr|A9RQX8|A9RQX8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_177216 PE=3 SV=1 Length = 187
Score = 276 bits (705), Expect = 7e-73 Identities = 135/151 (89%), Positives = 142/151 (94%) Frame = +3
Query: 69 MVKYSREPDNIAKACKSRGSDLRVHFKNTREAAQAIKKLDLAKAKRYLEDVVAHKQAIPF 248 MVKY+R+P N KACK+RGSDLRVHFKNTREAAQAIK ++LAKAKRYLEDV AHKQAIPF Sbjct: 1 MVKYARDPVNATKACKARGSDLRVHFKNTREAAQAIKHMELAKAKRYLEDVCAHKQAIPF 60
Query: 249 RRFCGGVGRTAQAKARHSNGQGRWPVKSAQFLLGLLKNAESNAETKGLDVDTLYVSHIQV 428 RRFCGGVGRTAQAKARHSNGQGRWPVKSA FLL LLKNAESNAE KGLDVD+L VSHIQV Sbjct: 61 RRFCGGVGRTAQAKARHSNGQGRWPVKSATFLLDLLKNAESNAEVKGLDVDSLVVSHIQV 120
Query: 429 NKAQKQRRRTYRAHGRINPYMSSPCHIELIL 521 N+AQKQRRRTYRAHGRINPYMSSPCHIELIL Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELIL 151
>tr|A7PHG3|A7PHG3_VITVI Chromosome chr17 scaffold_16, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00017930001 PE=3 SV=1 Length = 216
Score = 272 bits (695), Expect = 1e-71 Identities = 132/152 (86%), Positives = 142/152 (93%) Frame = +3
Query: 66 AMVKYSREPDNIAKACKSRGSDLRVHFKNTREAAQAIKKLDLAKAKRYLEDVVAHKQAIP 245 AMVKYSREPDN K+CK+RGSDLRVHFKNTRE A AI+KL L KAKRYLEDV+AHKQAIP Sbjct: 33 AMVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLRLTKAKRYLEDVLAHKQAIP 92
Query: 246 FRRFCGGVGRTAQAKARHSNGQGRWPVKSAQFLLGLLKNAESNAETKGLDVDTLYVSHIQ 425 F+RFC GVGRTAQAK RHSNGQGRWPVKSA+F+L LLKNAESNA+ KGLDVD+LYVSHIQ Sbjct: 93 FQRFCRGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNADLKGLDVDSLYVSHIQ 152
Query: 426 VNKAQKQRRRTYRAHGRINPYMSSPCHIELIL 521 VN+AQKQRRRTYRAHGRINPYMSSPCHIELIL Sbjct: 153 VNQAQKQRRRTYRAHGRINPYMSSPCHIELIL 184
>tr|A9PJV5|A9PJV5_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 178
Score = 270 bits (689), Expect = 5e-71 Identities = 129/151 (85%), Positives = 139/151 (92%) Frame = +3
Query: 69 MVKYSREPDNIAKACKSRGSDLRVHFKNTREAAQAIKKLDLAKAKRYLEDVVAHKQAIPF 248 MVKYSREPDN K+CK+RGSDLRVHFKNTRE A A++KL L KAKRYLEDV+AHKQAIPF Sbjct: 1 MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAFALRKLPLVKAKRYLEDVMAHKQAIPF 60
Query: 249 RRFCGGVGRTAQAKARHSNGQGRWPVKSAQFLLGLLKNAESNAETKGLDVDTLYVSHIQV 428 RRFCGGVGRTAQAK RHSNGQGRWP KSA+F+L LLKNAESNAE KGLDVD LY++HIQV Sbjct: 61 RRFCGGVGRTAQAKNRHSNGQGRWPAKSAKFILDLLKNAESNAEVKGLDVDALYITHIQV 120
Query: 429 NKAQKQRRRTYRAHGRINPYMSSPCHIELIL 521 N+AQKQRRRTYRAHGRINPYMSSPCHIEL L Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELTL 151
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