DK946664 |
Clone id |
YMU02A01NGRL0013_F08 |
Library |
YMU02 |
Length |
366 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0013_F08. 5' end sequence. |
Accession |
DK946664 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL36Contig1 |
Sequence |
GAAGCAGTGGTATCAACGCAGAGTGGCCATTACGGCCGGGTGTGAGCCGAAAATGGGGAT TCACCAAATTTTCTCGAACTGACTACTTGAAGTGGAAGGAAGAGAACAGAATTGTTAATG ATGGTGTCAATGCCAAGCTTCTTGGATGCCATGGATTGCTTTCTGCAAGGAAGCCAGGAA GAGCGTTTCTGTCAGCTGCTGTTTCTGCATGAAATGTCTGTACTCTGGGAATGACAATAT AAGCCTGAACGCAGATGCAAAATGAAATTTTGATTTAAAGACATTAGCATGATGTAGAGG ATATTGACTTTTTAAGTTTGGGAGAGTTTTATGGGGCAAAAAAAAAAAAAAAAAAAAAAA AAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q40592 |
Definition |
sp|Q40592|RL10_TOBAC 60S ribosomal protein L10 (Fragment) OS=Nicotiana tabacum |
Align length |
52 |
Score (bit) |
96.7 |
E-value |
3.0e-20 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B3TLM0 |
Definition |
tr|B3TLM0|B3TLM0_ELAGV QM-like protein OS=Elaeis guineensis var. tenera |
Align length |
55 |
Score (bit) |
103.0 |
E-value |
6.0e-21 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK946664|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0013_F08, 5' (297 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B3TLM0|B3TLM0_ELAGV QM-like protein OS=Elaeis guineensis var.... 103 6e-21 tr|Q3SC85|Q3SC85_SOLLC 60S ribosomal protein L10 OS=Solanum lyco... 98 2e-19 tr|Q38HS5|Q38HS5_SOLTU 60S ribosomal protein L10-like protein OS... 98 2e-19 tr|Q9FUN3|Q9FUN3_ELAGV QM-like protein OS=Elaeis guineensis var.... 98 2e-19 tr|A7QTC5|A7QTC5_VITVI Chromosome chr1 scaffold_166, whole genom... 98 2e-19 tr|A9TWJ0|A9TWJ0_PHYPA Predicted protein OS=Physcomitrella paten... 95 2e-18 tr|A9RQA3|A9RQA3_PHYPA Predicted protein OS=Physcomitrella paten... 94 3e-18 tr|A9RCU9|A9RCU9_PHYPA Predicted protein (Fragment) OS=Physcomit... 94 3e-18 tr|A9U2S2|A9U2S2_PHYPA Predicted protein OS=Physcomitrella paten... 94 4e-18 tr|A7NXZ2|A7NXZ2_VITVI Chromosome chr6 scaffold_3, whole genome ... 93 7e-18 tr|A9NPT9|A9NPT9_PICSI Putative uncharacterized protein OS=Picea... 91 4e-17 tr|A9PGG5|A9PGG5_POPTR Putative uncharacterized protein OS=Popul... 89 8e-17 tr|A9NPP8|A9NPP8_PICSI Putative uncharacterized protein OS=Picea... 89 1e-16 tr|B7FGF8|B7FGF8_MEDTR Putative uncharacterized protein OS=Medic... 87 5e-16 tr|A9P8W6|A9P8W6_POPTR Putative uncharacterized protein OS=Popul... 87 5e-16 tr|B7EBT7|B7EBT7_ORYSJ cDNA clone:002-188-A02, full insert seque... 86 7e-16 tr|B6TAQ2|B6TAQ2_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 82 1e-14 tr|B6UGR9|B6UGR9_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 82 1e-14 tr|B6TD86|B6TD86_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 82 1e-14 tr|B6T5B9|B6T5B9_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 82 1e-14 tr|B4FPT8|B4FPT8_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 82 1e-14 tr|Q2HIH6|Q2HIH6_ARATH At1g26910 OS=Arabidopsis thaliana PE=2 SV=1 80 5e-14 tr|B8AYH0|B8AYH0_ORYSI Putative uncharacterized protein OS=Oryza... 77 6e-13 tr|B7E5G0|B7E5G0_ORYSJ cDNA clone:001-035-D11, full insert seque... 77 6e-13 tr|Q93VL0|Q93VL0_ARATH At1g14320/F14L17_28 OS=Arabidopsis thalia... 76 7e-13 tr|Q6DV76|Q6DV76_9FABA QM family protein OS=Caragana jubata GN=Q... 75 2e-12 tr|Q6DV42|Q6DV42_CAMSI QM-like protein OS=Camellia sinensis PE=2... 75 2e-12 tr|A4RUV4|A4RUV4_OSTLU Ribosomal protein L10, component of cytos... 68 3e-10 tr|Q10LW7|Q10LW7_ORYSJ 60S ribosomal protein L10, putative, expr... 65 1e-09 tr|Q0DS57|Q0DS57_ORYSJ Os03g0332500 protein OS=Oryza sativa subs... 65 1e-09
>tr|B3TLM0|B3TLM0_ELAGV QM-like protein OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 224
Score = 103 bits (256), Expect = 6e-21 Identities = 47/55 (85%), Positives = 52/55 (94%) Frame = +2
Query: 2 VSRKWGFTKFSRTDYLKWKEENRIVNDGVNAKLLGCHGLLSARKPGRAFLSAAVS 166 VSRKWGFTKFSRTDYLKWK ENRI+ DGVNAKLLGCHG L+AR+PG+AFLSAAV+ Sbjct: 167 VSRKWGFTKFSRTDYLKWKSENRIIPDGVNAKLLGCHGPLAARQPGKAFLSAAVT 221
>tr|Q3SC85|Q3SC85_SOLLC 60S ribosomal protein L10 OS=Solanum lycopersicum GN=ACI29 PE=2 SV=1 Length = 220
Score = 98.2 bits (243), Expect = 2e-19 Identities = 46/53 (86%), Positives = 49/53 (92%) Frame = +2
Query: 2 VSRKWGFTKFSRTDYLKWKEENRIVNDGVNAKLLGCHGLLSARKPGRAFLSAA 160 VSRKWGFTKFSRTDYLK+K ENRIV DGVNAKLLGCHG L+AR+PGRAFL AA Sbjct: 167 VSRKWGFTKFSRTDYLKYKSENRIVPDGVNAKLLGCHGRLAARQPGRAFLEAA 219
>tr|Q38HS5|Q38HS5_SOLTU 60S ribosomal protein L10-like protein OS=Solanum tuberosum PE=2 SV=1 Length = 220
Score = 98.2 bits (243), Expect = 2e-19 Identities = 46/53 (86%), Positives = 49/53 (92%) Frame = +2
Query: 2 VSRKWGFTKFSRTDYLKWKEENRIVNDGVNAKLLGCHGLLSARKPGRAFLSAA 160 VSRKWGFTKFSRTDYLK+K ENRIV DGVNAKLLGCHG L+AR+PGRAFL AA Sbjct: 167 VSRKWGFTKFSRTDYLKYKSENRIVPDGVNAKLLGCHGRLAARQPGRAFLEAA 219
>tr|Q9FUN3|Q9FUN3_ELAGV QM-like protein OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 224
Score = 97.8 bits (242), Expect = 2e-19 Identities = 43/55 (78%), Positives = 49/55 (89%) Frame = +2
Query: 2 VSRKWGFTKFSRTDYLKWKEENRIVNDGVNAKLLGCHGLLSARKPGRAFLSAAVS 166 +SRKWGFTKF+RTDYL+WK ENRIV DGVNAKLLGCHG LSAR+PGRAFL ++ Sbjct: 167 ISRKWGFTKFNRTDYLRWKSENRIVPDGVNAKLLGCHGRLSARQPGRAFLPPTIA 221
>tr|A7QTC5|A7QTC5_VITVI Chromosome chr1 scaffold_166, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006249001 PE=4 SV=1 Length = 224
Score = 97.8 bits (242), Expect = 2e-19 Identities = 44/56 (78%), Positives = 50/56 (89%) Frame = +2
Query: 2 VSRKWGFTKFSRTDYLKWKEENRIVNDGVNAKLLGCHGLLSARKPGRAFLSAAVSA 169 VSRKWGFTKFSR DY+KWK+ENRI+ DGVNAKLLGCHG L+ R+PGRAFLS AV + Sbjct: 167 VSRKWGFTKFSRADYVKWKQENRIMPDGVNAKLLGCHGPLAQRQPGRAFLSGAVES 222
>tr|A9TWJ0|A9TWJ0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_172372 PE=4 SV=1 Length = 223
Score = 94.7 bits (234), Expect = 2e-18 Identities = 42/55 (76%), Positives = 48/55 (87%) Frame = +2
Query: 2 VSRKWGFTKFSRTDYLKWKEENRIVNDGVNAKLLGCHGLLSARKPGRAFLSAAVS 166 VSRKWGFTKF+R DY+KWKEENR+VNDGV AKLLGCHG L+ R GRAF+ AAV+ Sbjct: 167 VSRKWGFTKFARVDYVKWKEENRLVNDGVTAKLLGCHGPLAQRSAGRAFIDAAVA 221
>tr|A9RQA3|A9RQA3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_177230 PE=4 SV=1 Length = 223
Score = 94.4 bits (233), Expect = 3e-18 Identities = 42/55 (76%), Positives = 48/55 (87%) Frame = +2
Query: 2 VSRKWGFTKFSRTDYLKWKEENRIVNDGVNAKLLGCHGLLSARKPGRAFLSAAVS 166 VSRKWGFTKF+R DY+KWKEENR+VNDGV AKLLGCHG L+ R GRAF+ AAV+ Sbjct: 167 VSRKWGFTKFARVDYVKWKEENRLVNDGVTAKLLGCHGPLANRSAGRAFIDAAVA 221
>tr|A9RCU9|A9RCU9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_111565 PE=4 SV=1 Length = 219
Score = 94.4 bits (233), Expect = 3e-18 Identities = 42/55 (76%), Positives = 48/55 (87%) Frame = +2
Query: 2 VSRKWGFTKFSRTDYLKWKEENRIVNDGVNAKLLGCHGLLSARKPGRAFLSAAVS 166 VSRKWGFTKF+R DY+KWKEENR+VNDGV AKLLGCHG L+ R GRAF+ AAV+ Sbjct: 163 VSRKWGFTKFARVDYVKWKEENRLVNDGVTAKLLGCHGPLANRSAGRAFIDAAVA 217
>tr|A9U2S2|A9U2S2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_227764 PE=4 SV=1 Length = 223
Score = 93.6 bits (231), Expect = 4e-18 Identities = 42/55 (76%), Positives = 47/55 (85%) Frame = +2
Query: 2 VSRKWGFTKFSRTDYLKWKEENRIVNDGVNAKLLGCHGLLSARKPGRAFLSAAVS 166 VSRKWGFTKF+R DY+KWKEENR+VNDGV AKLLGCHG L R GRAF+ AAV+ Sbjct: 167 VSRKWGFTKFARVDYVKWKEENRLVNDGVTAKLLGCHGPLGNRTAGRAFIDAAVA 221
>tr|A7NXZ2|A7NXZ2_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00023920001 PE=4 SV=1 Length = 231
Score = 92.8 bits (229), Expect = 7e-18 Identities = 40/52 (76%), Positives = 48/52 (92%) Frame = +2
Query: 2 VSRKWGFTKFSRTDYLKWKEENRIVNDGVNAKLLGCHGLLSARKPGRAFLSA 157 VSRKWGFTKF+RTDY+KWK ENRI+ DGVNAKLLGCHG L+ R+PG+AF++A Sbjct: 178 VSRKWGFTKFNRTDYIKWKSENRILPDGVNAKLLGCHGPLANRQPGKAFINA 229
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