DK946668
Clone id YMU02A01NGRL0013_F12
Library
Length 515
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0013_F12. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
TATCGTAGCGGGTATAGTTTAGTGGTAAAAGTGTGACTCGTCTCGCAGTGATTTTGATAG
TTGAGGGATCGTATCTCGGCTAAATTAACTGAAAGAAAAAACTTTATCTTCGCAGAAAAT
ATGTGTTTTCTTATTATTTCTCCAAAATTAGAGGTAGAATAATCAATCTCGTCACTCATT
CATTTCAAGAACTAGGGAAGATAGTGACGAAGCAGAATTGTTTTGGTACCCCAAGAAATA
CTTGGTTTAATTTCTACTTCCGGGGAGATAAATAAAGAAAAAAAATCTATGGGTAGACGT
CTAAGATAGCTGACTCATCGTCACTAAACCTCAGAGAATAAATCTGGGAAAGAAAGTTGG
AATAAATAAATCCGGGTTTGTCAAGATTATTGAACATCTATTTGGTTGAACGGGATCCCT
CGTTTCAACAACTCGGTGAGATATATTTCCCTAAGGGTTTTTTTCCTGAAAAAAAAAAAA
AAATAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946668|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0013_F12, 5'
(468 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id A6D2J9
Definition tr|A6D2J9|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibrio shilonii AK1
Align length 50
Score (bit) 36.2
E-value 0.85
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946668|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0013_F12, 5'
(468 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A6D2J9|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibri... 36 0.85

>tr|A6D2J9|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibrio
shilonii AK1 GN=VSAK1_01567 PE=4 SV=1
Length = 319

Score = 36.2 bits (82), Expect = 0.85
Identities = 16/50 (32%), Positives = 31/50 (62%)
Frame = -2

Query: 188 LK*MSDEIDYSTSNFGEIIRKHIFSAKIKFFLSVNLAEIRSLNYQNHCET 39
LK +++E+D ST + ++++F A +F+L VNL + R++ Q C +
Sbjct: 234 LKQIANELDISTKSINLFFKEYLFIAPKRFYLLVNLFKFRNILIQGKCSS 283