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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK946709
Clone id YMU02A01NGRL0013_H17
Library
Length 394
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0013_H17. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GAGTCTAGAGCAGTGGAGCCATTGCAAAGAAAATTTGTAGGTGCCGCCATGACCGACGAG
CGCTGCACAAACATTGCTTTGTCGGGTGCTTCTCCTGCATTTTGTTCATCTGAAAGCAAA
GCCCCAGCTGCAAGCTTACAGCTCAAATCCTTCAATGGCTGTGAACGGCCATGTTGTGAA
AGCCAGAGCCTGAAGGCAGACATGCCAGCAGCAGCGCAACCAATGGGAAAGAATTTAGGA
AGCGTTGCCGTGACAGGCCATTGCTGAACAATGAACACGTCTTTGAGTGCTCCTCCTGCG
TGTTGTACGTCTAAAAGCGAAGTCCTGGAAGAAAAGGGGGGCTTACCTACTAAATATCTG
ACGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q9ERE6
Definition sp|Q9ERE6|MPRIP_RAT Myosin phosphatase Rho-interacting protein OS=Rattus norvegicus
Align length 112
Score (bit) 31.6
E-value 1.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946709|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0013_H17, 5'
         (365 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9ERE6|MPRIP_RAT Myosin phosphatase Rho-interacting protein O...    32   1.3  
sp|Q9UJY5|GGA1_HUMAN ADP-ribosylation factor-binding protein GGA...    32   1.3  
sp|A7YWM2|K1C40_BOVIN Keratin, type I cytoskeletal 40 OS=Bos tau...    30   4.9  
sp|P97434|MPRIP_MOUSE Myosin phosphatase Rho-interacting protein...    29   6.4  
sp|Q0UJJ7|NST1_PHANO Stress response protein NST1 OS=Phaeosphaer...    29   8.4  
sp|Q9KPH8|CARA_VIBCH Carbamoyl-phosphate synthase small chain OS...    29   8.4  

>sp|Q9ERE6|MPRIP_RAT Myosin phosphatase Rho-interacting protein
           OS=Rattus norvegicus GN=Mprip PE=1 SV=1
          Length = 1029

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 32/112 (28%), Positives = 47/112 (41%)
 Frame = +1

Query: 1   ESRAVEPLQRKFVGAAMTDERCTNIALSGASPAFCSSESKAPAASLQLKSFNGCERPCCE 180
           + R VEP   +  G A      ++   SG+S +  SS S  P+A          + P  +
Sbjct: 158 KKRKVEPPTPQEPGPAKMAVTSSSGGSSGSSSS--SSSSSIPSAE---------KVPTTK 206

Query: 181 SQSLKADMPAAAQPMGKNLGSVAVTGHC*TMNTSLSAPPACCTSKSEVLEEK 336
           S   + +M A  QP G +L  V         + S S PPA CT +   L+ K
Sbjct: 207 STLWQEEMRAKDQPDGTSLSPV--------QSPSQSQPPAACTPRETGLDSK 250


>sp|Q9UJY5|GGA1_HUMAN ADP-ribosylation factor-binding protein GGA1
           OS=Homo sapiens GN=GGA1 PE=1 SV=1
          Length = 639

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = +1

Query: 169 PCCESQSLKADMPAAAQPMGKNLGSVAVTGHC*TMNTSLSAPP 297
           P  E ++L+A +  A  P+ K L   ++ G C  +N     PP
Sbjct: 3   PAMEPETLEARINRATNPLNKELDWASINGFCEQLNEDFEGPP 45


>sp|A7YWM2|K1C40_BOVIN Keratin, type I cytoskeletal 40 OS=Bos taurus
           GN=KRT40 PE=2 SV=1
          Length = 431

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 19/61 (31%), Positives = 24/61 (39%)
 Frame = +1

Query: 82  SGASPAFCSSESKAPAASLQLKSFNGCERPCCESQSLKADMPAAAQPMGKNLGSVAVTGH 261
           S  SP  CSSES A A+   L S    E  C  S    +     + P G  L +  +   
Sbjct: 3   SDCSPTGCSSESSARASDCALASTCSVETTCLPSACATSSCQTPSFPSGARLPTGCLPPA 62

Query: 262 C 264
           C
Sbjct: 63  C 63


>sp|P97434|MPRIP_MOUSE Myosin phosphatase Rho-interacting protein
           OS=Mus musculus GN=Mprip PE=1 SV=2
          Length = 1024

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 30/112 (26%), Positives = 44/112 (39%)
 Frame = +1

Query: 1   ESRAVEPLQRKFVGAAMTDERCTNIALSGASPAFCSSESKAPAASLQLKSFNGCERPCCE 180
           + R VEP   +  G A        +A++ +S     S S  P+A          + P  +
Sbjct: 158 KKRKVEPPTPQEPGPA-------KMAVTSSSGGSSGSSSSIPSAE---------KVPTTK 201

Query: 181 SQSLKADMPAAAQPMGKNLGSVAVTGHC*TMNTSLSAPPACCTSKSEVLEEK 336
           S   + +M A  QP G +L            + S S PPA CT +   LE K
Sbjct: 202 STLWQEEMRAKDQPDGTSLSPA--------QSPSQSQPPAACTPREPGLESK 245


>sp|Q0UJJ7|NST1_PHANO Stress response protein NST1 OS=Phaeosphaeria
            nodorum GN=NST1 PE=3 SV=3
          Length = 1202

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
 Frame = -1

Query: 179  SQHGRSQPLKDLSCKLAAGALLSDEQNAGEAPDKAMFVQR-SSVMAAPTNF 30
            ++HG+   + +L+  L + ALL DE++  E PD+   VQ+  S+ + P  F
Sbjct: 959  NKHGQDSDVDELADHLGSKALL-DEEDVPEIPDRRSSVQQHGSMRSMPIGF 1008


>sp|Q9KPH8|CARA_VIBCH Carbamoyl-phosphate synthase small chain
           OS=Vibrio cholerae GN=carA PE=3 SV=1
          Length = 379

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = -1

Query: 212 AAGMSAFRLWLSQHGRSQPLKDLSCKLAAGALLSDEQNAGEAPDKA 75
           A+G    ++    HG + P+KDL      G ++   QN G A D+A
Sbjct: 278 ASGAKTVKMKFGHHGANHPVKDLD----RGVVMITSQNHGFAADEA 319
tr_hit_id B3NPT0
Definition tr|B3NPT0|B3NPT0_DROER GG22890 OS=Drosophila erecta
Align length 123
Score (bit) 37.0
E-value 0.49
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946709|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0013_H17, 5'
         (365 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B3NPT0|B3NPT0_DROER GG22890 OS=Drosophila erecta GN=GG22890 P...    37   0.49 
tr|B4PA74|B4PA74_DROYA GE14329 OS=Drosophila yakuba GN=GE14329 P...    35   1.4  
tr|A4HTZ6|A4HTZ6_LEIIN Acyl-CoA binding protein, putative OS=Lei...    34   3.2  
tr|Q1YHD7|Q1YHD7_MOBAS Possible transporter, major facilitator s...    34   4.2  
tr|Q0IZR0|Q0IZR0_ORYSJ Os09g0555400 protein OS=Oryza sativa subs...    33   7.1  
tr|A2Z3X5|A2Z3X5_ORYSI Putative uncharacterized protein OS=Oryza...    33   7.1  
tr|Q7S3L0|Q7S3L0_NEUCR Predicted protein OS=Neurospora crassa GN...    33   9.3  

>tr|B3NPT0|B3NPT0_DROER GG22890 OS=Drosophila erecta GN=GG22890 PE=4
            SV=1
          Length = 1201

 Score = 37.0 bits (84), Expect = 0.49
 Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 3/123 (2%)
 Frame = +1

Query: 4    SRAVEPLQRKF-VGAAMTDERCTNIALSGASPAFCSSE--SKAPAASLQLKSFNGCERPC 174
            S+A  PL+      AA+   +   I  + A  A  ++   +K+ +AS+   + N   +P 
Sbjct: 944  SKAAAPLKAGAGAAAAVNAAQAAKITPAAAPSALVATAPPAKSTSASVAKTNTNAGSKPA 1003

Query: 175  CESQSLKADMPAAAQPMGKNLGSVAVTGHC*TMNTSLSAPPACCTSKSEVLEEKGGLPTK 354
              S +LK+D PAAA  +G   G V  +G       + SA PA     +    +K  + T 
Sbjct: 1004 AASTALKSDGPAAAASVGVTNGKVTPSG-----GVTASAQPAVNQKATAAATQKSQVETA 1058

Query: 355  YLT 363
              T
Sbjct: 1059 TAT 1061


>tr|B4PA74|B4PA74_DROYA GE14329 OS=Drosophila yakuba GN=GE14329 PE=4
           SV=1
          Length = 632

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
 Frame = +1

Query: 76  ALSGASPAFCSSESKAPAASLQLKSFNGCERPCCESQSLKADMPAAAQPMGKNLGSVAVT 255
           A+  A+P    ++S + +AS+  K+ N   +P     + K+D+PAAA  +G   G V  +
Sbjct: 404 AVVAAAP---QAKSTSTSASVAKKNTNAGSKPTAAMSTFKSDVPAAAASVGATNGKVTPS 460

Query: 256 GHC*TMN--TSLSAPPACCTSKSE 321
           G    M   T      A  T KS+
Sbjct: 461 GGATAMEQPTGNQKATAAATQKSQ 484


>tr|A4HTZ6|A4HTZ6_LEIIN Acyl-CoA binding protein, putative
           OS=Leishmania infantum GN=LinJ09.0800 PE=4 SV=1
          Length = 998

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 19/50 (38%), Positives = 27/50 (54%)
 Frame = +1

Query: 151 FNGCERPCCESQSLKADMPAAAQPMGKNLGSVAVTGHC*TMNTSLSAPPA 300
           F GC  P    Q+L  D  A     G+++G  A+TG     N+SLS+PP+
Sbjct: 402 FEGCFAPILRGQTLLTDRCAG----GRSVGFTALTGAALPHNSSLSSPPS 447


>tr|Q1YHD7|Q1YHD7_MOBAS Possible transporter, major facilitator
           superfamily OS=Manganese-oxidizing bacterium (strain
           SI85-9A1) GN=SI859A1_00300 PE=4 SV=1
          Length = 417

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 22/83 (26%), Positives = 35/83 (42%)
 Frame = -1

Query: 278 VFIVQQWPVTATLPKFFPIGCAAAGMSAFRLWLSQHGRSQPLKDLSCKLAAGALLSDEQN 99
           +F+  QWP+ A +  F  +G    G +   ++LS+  R  PL+ +               
Sbjct: 306 LFVSPQWPLAAVIAAFMLLGLTGVGWNG--VYLSEVARLSPLRAV--------------- 348

Query: 98  AGEAPDKAMFVQRSSVMAAPTNF 30
            G     AMFV  + V+  PT F
Sbjct: 349 -GSVTGTAMFVTFAGVLVGPTLF 370


>tr|Q0IZR0|Q0IZR0_ORYSJ Os09g0555400 protein OS=Oryza sativa subsp.
           japonica GN=Os09g0555400 PE=4 SV=1
          Length = 644

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 23/51 (45%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = -2

Query: 304 NTQEEHSKTCSLFSNGLSRQRFL-NSFPLVALLLACLPSGSGFHNMAVHSH 155
           NT+E     CSLF  G+ RQ  L + F LV+LL AC   G+      VHSH
Sbjct: 191 NTRE----ACSLFE-GMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHSH 236


>tr|A2Z3X5|A2Z3X5_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_32340 PE=4 SV=1
          Length = 644

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 23/51 (45%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = -2

Query: 304 NTQEEHSKTCSLFSNGLSRQRFL-NSFPLVALLLACLPSGSGFHNMAVHSH 155
           NT+E     CSLF  G+ RQ  L + F LV+LL AC   G+      VHSH
Sbjct: 191 NTRE----ACSLFE-GMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHSH 236


>tr|Q7S3L0|Q7S3L0_NEUCR Predicted protein OS=Neurospora crassa
           GN=NCU08233 PE=4 SV=1
          Length = 220

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 15/68 (22%)
 Frame = -1

Query: 302 HAGGALKDVFIVQQWPVTATLPKFF-------PIGCAA--------AGMSAFRLWLSQHG 168
           H GG   D+F +Q   + A L +FF       PI C A        AGM  F  W+  H 
Sbjct: 9   HGGGTTPDIFRIQARKLDAALSQFFDLHYVSAPIECPAGPGVLPFFAGMEPFLKWM--HD 66

Query: 167 RSQPLKDL 144
           +   L+DL
Sbjct: 67  QPPDLEDL 74