DK946719
Clone id YMU02A01NGRL0013_I08
Library
Length 563
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0013_I08. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GATTCCAGAGGCTCTCACCAAAGCAGGAATCTTGAACACCCCATCATGGTACTCAGCTGG
AGAGGCCGAGTACTTCACAGATACGACTACCCTCTTCGTTGTGGAGCTTATATTCTTGGG
TTGGGCCGAGGGCCGAAGATGGGCAGACATCATCACTCCAGGATCAGTGAATACTGATCC
CATCTTCACCAACAACAAGCTAACAGGCACAGATGTCGGATATCCCGGTGGCTTCTGGTT
TGACCCTCTAGGCTGGGGCTCTGGTTCTCCTGAGAAGCTCAAGGAGCTAAGGACTAAGGA
GATCAAGAATGGCAGACTCGCTATGTTGGCCGTTATGGGTGCATGGTTCCAAGCAATCTA
CACCGGCACTGGCCCCATTGACAACCTTGCCGCCCATCTTTCTGACCCTGGCCACAACAC
CATTTTCTCGGCTTTCTTGAGCAAGTGAGCGATGATCCTTCTACCTCCATCACTTGGAGC
AGATATTGACTTTCGCTTCCTTTGTATGCCAATTGAGAAGTTTGTAAAAACCTTTTATTT
GGTTGGAAGGTCCTATTTTGTCG
■■Homology search results ■■ -
sp_hit_id P10708
Definition sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum
Align length 148
Score (bit) 275.0
E-value 1.0e-73
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946719|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0013_I08, 5'
(563 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloropl... 275 1e-73
sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplas... 274 2e-73
sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloropl... 145 1e-34
sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloropla... 144 3e-34
sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloropl... 115 2e-25
sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chl... 111 2e-24
sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplas... 109 8e-24
sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl... 84 5e-16
sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180, ch... 84 5e-16
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl... 84 5e-16
sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop... 83 8e-16
sp|P22686|CB2_CHLMO Chlorophyll a-b binding protein of LHCII typ... 82 1e-15
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb... 82 1e-15
sp|P09755|CB22_SOYBN Chlorophyll a-b binding protein 2, chloropl... 82 1e-15
sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplas... 81 3e-15
sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloropl... 81 4e-15
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb... 80 5e-15
sp|P08222|CB22_CUCSA Chlorophyll a-b binding protein of LHCII ty... 80 5e-15
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty... 80 5e-15
sp|Q07473|CB4A_ARATH Chlorophyll a-b binding protein CP29.1, chl... 80 7e-15
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl... 80 7e-15
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop... 80 7e-15
sp|P12471|CB21_SOYBN Chlorophyll a-b binding protein, chloroplas... 80 7e-15
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty... 80 7e-15
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl... 80 9e-15
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro... 80 9e-15
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop... 80 9e-15
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas... 79 1e-14
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop... 79 1e-14
sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloropl... 79 1e-14

>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7,
chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1
Length = 270

Score = 275 bits (702), Expect = 1e-73
Identities = 127/148 (85%), Positives = 134/148 (90%)
Frame = +2

Query: 2 IPEALTKAGILNTPSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITPGSVNTDP 181
IPE LTK GILNTPSWY+AGE EYFTDTTTLF+VEL+ +GWAEGRRWADII PG VNTDP
Sbjct: 123 IPELLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPGCVNTDP 182

Query: 182 IFTNNKLTGTDVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAIY 361
IF NNKLTGTDVGYPGG WFDPLGWGSGSP K+KELRTKEIKNGRLAMLAVMGAWFQ IY
Sbjct: 183 IFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIY 242

Query: 362 TGTGPIDNLAAHLSDPGHNTIFSAFLSK 445
TGTGPIDNL AHL+DPGH TIF+AF K
Sbjct: 243 TGTGPIDNLFAHLADPGHATIFAAFSPK 270



Score = 35.0 bits (79), Expect = 0.25
Identities = 21/54 (38%), Positives = 27/54 (50%)
Frame = +2

Query: 212 DVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAIYTGTG 373
D PG F FDPLG S PE L+ + E+ + R AML G + + T G
Sbjct: 79 DGSLPGDFGFDPLGLAS-DPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIG 131


>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic
OS=Petunia hybrida PE=2 SV=1
Length = 270

Score = 274 bits (700), Expect = 2e-73
Identities = 126/148 (85%), Positives = 134/148 (90%)
Frame = +2

Query: 2 IPEALTKAGILNTPSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITPGSVNTDP 181
IPE LTK G+LNTPSWY+AGE EYFTDTTTLFV+EL+ +GWAEGRRWADII PG VNTDP
Sbjct: 123 IPEFLTKIGVLNTPSWYTAGEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDP 182

Query: 182 IFTNNKLTGTDVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAIY 361
IF NNKLTGTDVGYPGG WFDPLGWGSGSP K+KELRTKEIKNGRLAMLAVMGAWFQ IY
Sbjct: 183 IFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIY 242

Query: 362 TGTGPIDNLAAHLSDPGHNTIFSAFLSK 445
TGTGPIDNL AHL+DPGH TIF+AF K
Sbjct: 243 TGTGPIDNLFAHLADPGHATIFAAFSPK 270



Score = 38.5 bits (88), Expect = 0.023
Identities = 23/57 (40%), Positives = 28/57 (49%)
Frame = +2

Query: 212 DVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAIYTGTGPID 382
D PG F FDPLG GS PE LK E+ + R AML G + T G ++
Sbjct: 79 DGSLPGDFGFDPLGLGS-DPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLN 134


>sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4,
chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1
Length = 251

Score = 145 bits (367), Expect = 1e-34
Identities = 74/145 (51%), Positives = 90/145 (62%)
Frame = +2

Query: 2 IPEALTKAGILNTPSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITPGSVNTDP 181
+PE TK GI+N P WY AG+ +YF ++TLFV+E I + E RRW DI PGSVN DP
Sbjct: 112 LPEVFTKIGIINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDP 171

Query: 182 IFTNNKLTGTDVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAIY 361
IF L +VGYPGG F+PL + +E + KE+ NGRLAMLA +G Q
Sbjct: 172 IFKQYSLPKGEVGYPGGI-FNPLNFA-----PTQEAKEKELANGRLAMLAFLGFVVQHNV 225

Query: 362 TGTGPIDNLAAHLSDPGHNTIFSAF 436
TG GP +NL HLSDP HNTI F
Sbjct: 226 TGKGPFENLLQHLSDPWHNTIVQTF 250



Score = 37.7 bits (86), Expect = 0.039
Identities = 26/61 (42%), Positives = 31/61 (50%)
Frame = +2

Query: 200 LTGTDVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAIYTGTGPI 379
LTG+ G G FDPLG PE LK E+ NGR AML V G ++T G I
Sbjct: 67 LTGSLAGDNG---FDPLGLAE-DPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGII 122

Query: 380 D 382
+
Sbjct: 123 N 123


>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4,
chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1
Length = 252

Score = 144 bits (363), Expect = 3e-34
Identities = 74/141 (52%), Positives = 88/141 (62%)
Frame = +2

Query: 2 IPEALTKAGILNTPSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITPGSVNTDP 181
+PE T GI+N P WY+AG+ EYF ++TLFV+E I + E RRW DI PGSVN DP
Sbjct: 111 LPEVFTSIGIINVPKWYAAGKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDP 170

Query: 182 IFTNNKLTGTDVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAIY 361
IF L +VGYPGG F+PL + E + KEI NGRLAMLA +G Q
Sbjct: 171 IFKQYSLPAGEVGYPGGI-FNPLNFA-----PTLEAKEKEIANGRLAMLAFLGFIIQHNV 224

Query: 362 TGTGPIDNLAAHLSDPGHNTI 424
TG GP DNL H+SDP HNTI
Sbjct: 225 TGKGPFDNLLQHISDPWHNTI 245



Score = 38.5 bits (88), Expect = 0.023
Identities = 25/61 (40%), Positives = 31/61 (50%)
Frame = +2

Query: 200 LTGTDVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAIYTGTGPI 379
LTG+ PG FDPLG PE L+ E+ NGR AML V G ++T G I
Sbjct: 66 LTGS---LPGDNGFDPLGLAE-DPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGII 121

Query: 380 D 382
+
Sbjct: 122 N 122


>sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8,
chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1
Length = 273

Score = 115 bits (287), Expect = 2e-25
Identities = 66/154 (42%), Positives = 91/154 (59%), Gaps = 11/154 (7%)
Frame = +2

Query: 5 PEALTKAGIL---NTPSWYS------AGEAEYFTDTTTLFVVELIFLGWAEGRRWADIIT 157
PE L KAG++ +W+ AG Y+ D TLFV+E+ +G+AE RR+ D
Sbjct: 117 PEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAK 176

Query: 158 PGSVNTDPIFTNNKLTGT--DVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLA 331
PGS+ K G D YPGG F+PLG+G + +KEL+ KEIKNGRLAMLA
Sbjct: 177 PGSMGKQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGKDE-KSMKELKLKEIKNGRLAMLA 235

Query: 332 VMGAWFQAIYTGTGPIDNLAAHLSDPGHNTIFSA 433
++G + QA+ TG GP NL HL+DP +N + ++
Sbjct: 236 ILGYFIQALVTGVGPYQNLLDHLADPVNNNVLTS 269



Score = 35.0 bits (79), Expect = 0.25
Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +2

Query: 188 TNNKLTGTDVGYPGGFWFDPLGW----GSGSPEKLKELRTKEIKNGRLAMLAVMGA 343
+ L+ D PG F FDPLG G+G + K L E+ NGR AML GA
Sbjct: 59 SKQSLSYLDGRLPGDFGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGA 114


>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20,
chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20
PE=1 SV=1
Length = 231

Score = 111 bits (278), Expect = 2e-24
Identities = 67/142 (47%), Positives = 84/142 (59%), Gaps = 1/142 (0%)
Frame = +2

Query: 2 IPEALTKAGILNTPSWYSA-GEAEYFTDTTTLFVVELIFLGWAEGRRWADIITPGSVNTD 178
IPE LTKAG++N P W G+ YF ++T V + + E RRW DI PGSVN D
Sbjct: 91 IPEVLTKAGLMNAPEWLRLPGKETYFASSSTALRVHMSST-YVEIRRWQDIKNPGSVNQD 149

Query: 179 PIFTNNKLTGTDVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAI 358
PIF + L + GYPG F+PL + +P + KE KE+ NGRLAMLA +G Q
Sbjct: 150 PIFKSYSLPPHECGYPGRV-FNPLNF---APLENKE---KELANGRLAMLAFLGFLVQHN 202

Query: 359 YTGTGPIDNLAAHLSDPGHNTI 424
G GP +NL HL+DP HNTI
Sbjct: 203 VHGKGPFENLQQHLADPWHNTI 224



Score = 33.9 bits (76), Expect = 0.57
Identities = 25/74 (33%), Positives = 32/74 (43%)
Frame = +2

Query: 212 DVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAIYTGTGPIDNLA 391
D G FDPL PE L+ ++ NGR AML V G + T G + N
Sbjct: 47 DGSLEGDNGFDPLALAE-DPEDLRWFVQADVVNGRWAMLGVAGMLIPEVLTKAG-LMNAP 104

Query: 392 AHLSDPGHNTIFSA 433
L PG T F++
Sbjct: 105 EWLRLPGKETYFAS 118


>sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplastic
OS=Pisum sativum GN=lhca3 PE=1 SV=1
Length = 275

Score = 109 bits (273), Expect = 8e-24
Identities = 62/154 (40%), Positives = 90/154 (58%), Gaps = 11/154 (7%)
Frame = +2

Query: 5 PEALTKAGIL---NTPSWYS------AGEAEYFTDTTTLFVVELIFLGWAEGRRWADIIT 157
PE L K G++ +W+ AG Y+ D TLFV+E+ +G+AE RR+ D
Sbjct: 119 PEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAK 178

Query: 158 PGSVNTDPIFTNNKLTGT--DVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLA 331
PGS+ K G + YPGG +F+PLG+G + LKEL+ KE+KNGRLAMLA
Sbjct: 179 PGSMGKQYFLGLEKGFGGSGNPAYPGGPFFNPLGFGKDE-KSLKELKLKEVKNGRLAMLA 237

Query: 332 VMGAWFQAIYTGTGPIDNLAAHLSDPGHNTIFSA 433
++G + Q + TG GP NL H++DP +N + ++
Sbjct: 238 ILGYFIQGLVTGVGPYQNLLDHVADPVNNNVLTS 271



Score = 34.3 bits (77), Expect = 0.43
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = +2

Query: 188 TNNKLTGTDVGYPGGFWFDPLGW----GSGSPEKLKELRTKEIKNGRLAMLAVMGA 343
+ L+ D PG + FDPLG G+G + + L E+ NGR AML +GA
Sbjct: 61 SKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAVGA 116


>sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2,
chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1
Length = 267

Score = 84.0 bits (206), Expect = 5e-16
Identities = 58/151 (38%), Positives = 81/151 (53%), Gaps = 9/151 (5%)
Frame = +2

Query: 5 PEALTKAGI-LNTPSWYSAGEAEYFTD-------TTTLFVVELIFLGWAEGRRWADIITP 160
PE L + G+ W+ AG ++ F+D +L + I WA +I
Sbjct: 116 PELLARNGVKFGEAVWFKAG-SQIFSDGGLDYLGNPSLVHAQSILAIWA-----TQVILM 169

Query: 161 GSVNTDPIFTNNKL-TGTDVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLAVM 337
G+V + N L D+ YPGG FDPLG + PE EL+ KE+KNGRLAM ++
Sbjct: 170 GAVEGYRVAGNGPLGEAEDLLYPGGS-FDPLGLAT-DPEAFAELKVKELKNGRLAMFSMF 227

Query: 338 GAWFQAIYTGTGPIDNLAAHLSDPGHNTIFS 430
G + QAI TG GPI+NLA HL+DP +N ++
Sbjct: 228 GFFVQAIVTGKGPIENLADHLADPVNNNAWA 258


>sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180,
chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1
SV=1
Length = 267

Score = 84.0 bits (206), Expect = 5e-16
Identities = 58/151 (38%), Positives = 81/151 (53%), Gaps = 9/151 (5%)
Frame = +2

Query: 5 PEALTKAGI-LNTPSWYSAGEAEYFTD-------TTTLFVVELIFLGWAEGRRWADIITP 160
PE L + G+ W+ AG ++ F+D +L + I WA +I
Sbjct: 116 PELLARNGVKFGEAVWFKAG-SQIFSDGGLDYLGNPSLVHAQSILAIWA-----TQVILM 169

Query: 161 GSVNTDPIFTNNKL-TGTDVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLAVM 337
G+V + N L D+ YPGG FDPLG + PE EL+ KE+KNGRLAM ++
Sbjct: 170 GAVEGYRVAGNGPLGEAEDLLYPGGS-FDPLGLAT-DPEAFAELKVKELKNGRLAMFSMF 227

Query: 338 GAWFQAIYTGTGPIDNLAAHLSDPGHNTIFS 430
G + QAI TG GPI+NLA HL+DP +N ++
Sbjct: 228 GFFVQAIVTGKGPIENLADHLADPVNNNAWA 258


>sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21,
chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1
Length = 245

Score = 84.0 bits (206), Expect = 5e-16
Identities = 58/150 (38%), Positives = 79/150 (52%), Gaps = 9/150 (6%)
Frame = +2

Query: 2 IPEALTKAGILNTPSWYSA--GEAEYFTDTT------TLFVVELIFLGWAEGRRWADIIT 157
+PEAL + W + G+A Y + T+ +E + + +AE +R
Sbjct: 103 VPEALGLGNWVKAQEWAALPDGQATYLGNPVPWGNLPTILAIEFLAIAFAEQQR------ 156

Query: 158 PGSVNTDPIFTNNKLTGTDVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLAVM 337
++ DP YPGG FDPLG+ S P K +EL+ KEIKNGRLAMLA +
Sbjct: 157 --TMEKDP---------EKKKYPGGA-FDPLGF-SKDPAKFEELKLKEIKNGRLAMLAFV 203

Query: 338 GAWFQ-AIYTGTGPIDNLAAHLSDPGHNTI 424
G Q + Y GTGP++NLA HL+DP HN I
Sbjct: 204 GFCVQQSAYPGTGPLENLATHLADPWHNNI 233



Score = 33.9 bits (76), Expect = 0.57
Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 10/76 (13%)
Frame = +2

Query: 212 DVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLAV----------MGAWFQAIY 361
D PG F FDPLG + PE + + EI + R AML V +G W +A
Sbjct: 59 DGSSPGDFGFDPLGLAT-VPENFERFKESEIYHCRWAMLCVPGVLVPEALGLGNWVKAQE 117

Query: 362 TGTGPIDNLAAHLSDP 409
P D A +L +P
Sbjct: 118 WAALP-DGQATYLGNP 132


tr_hit_id Q8VXA6
Definition tr|Q8VXA6|Q8VXA6_PICAB Putative chlorophyll A-B binding protein of LHCI type II OS=Picea abies
Align length 148
Score (bit) 281.0
E-value 2.0e-74
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946719|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0013_I08, 5'
(563 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q8VXA6|Q8VXA6_PICAB Putative chlorophyll A-B binding protein ... 281 2e-74
tr|A9NKX1|A9NKX1_PICSI Putative uncharacterized protein OS=Picea... 281 2e-74
tr|Q02070|Q02070_PINSY Type II chlorophyll a /b-binding protein ... 279 9e-74
tr|A9PGU8|A9PGU8_POPTR Putative uncharacterized protein OS=Popul... 278 1e-73
tr|A9PGU3|A9PGU3_POPTR Putative uncharacterized protein OS=Popul... 278 1e-73
tr|A7QP61|A7QP61_VITVI Chromosome chr1 scaffold_136, whole genom... 278 2e-73
tr|A5B4F0|A5B4F0_VITVI Putative uncharacterized protein OS=Vitis... 278 2e-73
tr|Q41038|Q41038_PEA Type II chlorophyll a/b binding protein fro... 276 6e-73
tr|Q9SYW8|Q9SYW8_ARATH Lhca2 protein OS=Arabidopsis thaliana GN=... 275 9e-73
tr|Q9M320|Q9M320_ARATH Lhca2 protein OS=Arabidopsis thaliana GN=... 275 9e-73
tr|Q40252|Q40252_LOLTE Type II LHCI OS=Lolium temulentum GN=lhaB... 275 1e-72
tr|B6SMV5|B6SMV5_MAIZE Chlorophyll a-b binding protein OS=Zea ma... 275 1e-72
tr|B6SJV3|B6SJV3_MAIZE Chlorophyll a-b binding protein OS=Zea ma... 275 2e-72
tr|Q6ZL95|Q6ZL95_ORYSJ Os07g0577600 protein OS=Oryza sativa subs... 274 3e-72
tr|A2YMZ1|A2YMZ1_ORYSI Putative uncharacterized protein OS=Oryza... 274 3e-72
tr|Q43485|Q43485_HORVU LHCI-680, photosystem I antenna protein O... 273 6e-72
tr|A4URF4|A4URF4_BRAJU LhCa2 protein OS=Brassica juncea PE=2 SV=2 273 6e-72
tr|B6TKL9|B6TKL9_MAIZE Chlorophyll a-b binding protein OS=Zea ma... 272 8e-72
tr|B6T892|B6T892_MAIZE Chlorophyll a-b binding protein OS=Zea ma... 272 8e-72
tr|B4F9W3|B4F9W3_MAIZE Putative uncharacterized protein OS=Zea m... 272 8e-72
tr|A9TJ06|A9TJ06_PHYPA Predicted protein OS=Physcomitrella paten... 238 1e-61
tr|A9TV00|A9TV00_PHYPA Predicted protein (Fragment) OS=Physcomit... 236 5e-61
tr|A9U5E4|A9U5E4_PHYPA Predicted protein OS=Physcomitrella paten... 236 8e-61
tr|A9RW10|A9RW10_PHYPA Predicted protein OS=Physcomitrella paten... 234 2e-60
tr|A9TV02|A9TV02_PHYPA Predicted protein OS=Physcomitrella paten... 233 5e-60
tr|O22383|O22383_ORYSA Photosystem I antenna protein OS=Oryza sa... 232 9e-60
tr|B6ZA51|B6ZA51_HELAN Chlorophyll binding protein (Fragment) OS... 223 4e-57
tr|B6ZA66|B6ZA66_HELPE Chlorophyll binding protein (Fragment) OS... 222 1e-56
tr|B6ZA39|B6ZA39_HELAN Chlorophyll binding protein (Fragment) OS... 222 1e-56
tr|B6ZA49|B6ZA49_HELAN Chlorophyll binding protein (Fragment) OS... 220 5e-56

>tr|Q8VXA6|Q8VXA6_PICAB Putative chlorophyll A-B binding protein of
LHCI type II OS=Picea abies GN=pPA0001 PE=2 SV=1
Length = 278

Score = 281 bits (719), Expect = 2e-74
Identities = 131/148 (88%), Positives = 137/148 (92%)
Frame = +2

Query: 2 IPEALTKAGILNTPSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITPGSVNTDP 181
IPE LTK GILNTPSWY+AGE EYFTD TTLFVVE+IFLGWAEGRRWADII PGSVNTDP
Sbjct: 131 IPELLTKLGILNTPSWYTAGELEYFTDKTTLFVVEMIFLGWAEGRRWADIIKPGSVNTDP 190

Query: 182 IFTNNKLTGTDVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAIY 361
IF NNKLTGTDVGYPGG WFDPLGWGSGSPEK+KELRTKEIKNGRLAMLAVMGAWFQA Y
Sbjct: 191 IFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEY 250

Query: 362 TGTGPIDNLAAHLSDPGHNTIFSAFLSK 445
TGTGPIDNL AHL+DPGH T+F+AF SK
Sbjct: 251 TGTGPIDNLLAHLADPGHATVFAAFSSK 278



Score = 34.7 bits (78), Expect = 3.7
Identities = 22/54 (40%), Positives = 26/54 (48%)
Frame = +2

Query: 212 DVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAIYTGTG 373
D P F FDPLG GS PE LK E+ + R AML G + + T G
Sbjct: 87 DGSLPADFGFDPLGLGS-DPETLKWNVQSELVHCRWAMLGAAGIFIPELLTKLG 139


>tr|A9NKX1|A9NKX1_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 278

Score = 281 bits (719), Expect = 2e-74
Identities = 131/148 (88%), Positives = 137/148 (92%)
Frame = +2

Query: 2 IPEALTKAGILNTPSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITPGSVNTDP 181
IPE LTK GILNTPSWY+AGE EYFTD TTLFVVE+IFLGWAEGRRWADII PGSVNTDP
Sbjct: 131 IPELLTKLGILNTPSWYTAGEQEYFTDKTTLFVVEMIFLGWAEGRRWADIIKPGSVNTDP 190

Query: 182 IFTNNKLTGTDVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAIY 361
IF NNKLTGTDVGYPGG WFDPLGWGSGSPEK+KELRTKEIKNGRLAMLAVMGAWFQA Y
Sbjct: 191 IFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEY 250

Query: 362 TGTGPIDNLAAHLSDPGHNTIFSAFLSK 445
TGTGPIDNL AHL+DPGH T+F+AF SK
Sbjct: 251 TGTGPIDNLLAHLADPGHATVFAAFSSK 278



Score = 34.7 bits (78), Expect = 3.7
Identities = 22/54 (40%), Positives = 26/54 (48%)
Frame = +2

Query: 212 DVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAIYTGTG 373
D P F FDPLG GS PE LK E+ + R AML G + + T G
Sbjct: 87 DGSLPADFGFDPLGLGS-DPETLKWNVQSELVHCRWAMLGAAGIFIPELLTKLG 139


>tr|Q02070|Q02070_PINSY Type II chlorophyll a /b-binding protein
OS=Pinus sylvestris GN=lhaB1 PE=2 SV=1
Length = 278

Score = 279 bits (713), Expect = 9e-74
Identities = 130/148 (87%), Positives = 136/148 (91%)
Frame = +2

Query: 2 IPEALTKAGILNTPSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITPGSVNTDP 181
IPE TK GILNTPSWY+AGE EYFTD TTLFVVE+IFLGWAEGRRWADI+ PGSVNTDP
Sbjct: 131 IPELCTKLGILNTPSWYTAGELEYFTDKTTLFVVEMIFLGWAEGRRWADILEPGSVNTDP 190

Query: 182 IFTNNKLTGTDVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAIY 361
IF NNKLTGTDVGYPGG WFDPLGWGSGSPEK+KELRTKEIKNGRLAMLAVMGAWFQA Y
Sbjct: 191 IFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEY 250

Query: 362 TGTGPIDNLAAHLSDPGHNTIFSAFLSK 445
TGTGPIDNL AHL+DPGH TIF+AF SK
Sbjct: 251 TGTGPIDNLLAHLADPGHATIFAAFSSK 278



Score = 38.1 bits (87), Expect = 0.33
Identities = 23/54 (42%), Positives = 28/54 (51%)
Frame = +2

Query: 212 DVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAIYTGTG 373
D PG F FDPLG GS PE LK + E+ + R AML G + + T G
Sbjct: 87 DGSLPGDFGFDPLGLGS-DPETLKWMVQAELVHCRWAMLGAAGIFIPELCTKLG 139


>tr|A9PGU8|A9PGU8_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 269

Score = 278 bits (712), Expect = 1e-73
Identities = 128/148 (86%), Positives = 135/148 (91%)
Frame = +2

Query: 2 IPEALTKAGILNTPSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITPGSVNTDP 181
IPE LTK GILNTPSWYSAGE EYFTDTTTLF+VEL F+GWAEGRRWADI+ PG VNTDP
Sbjct: 122 IPEFLTKIGILNTPSWYSAGEVEYFTDTTTLFIVELFFIGWAEGRRWADILKPGCVNTDP 181

Query: 182 IFTNNKLTGTDVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAIY 361
IF NNKLTGTDVGYPGG WFDPLGWGSGSPEK+KELRTKEIKNGRLAMLAVMGAWFQ IY
Sbjct: 182 IFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIY 241

Query: 362 TGTGPIDNLAAHLSDPGHNTIFSAFLSK 445
TGTGPIDNL AHL+DPGH T+F+AF K
Sbjct: 242 TGTGPIDNLFAHLADPGHATVFAAFTPK 269



Score = 34.7 bits (78), Expect = 3.7
Identities = 22/54 (40%), Positives = 26/54 (48%)
Frame = +2

Query: 212 DVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAIYTGTG 373
D PG F FDPLG GS PE L+ E+ + R AML G + T G
Sbjct: 78 DGSLPGDFGFDPLGLGS-DPETLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIG 130


>tr|A9PGU3|A9PGU3_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 269

Score = 278 bits (711), Expect = 1e-73
Identities = 128/148 (86%), Positives = 135/148 (91%)
Frame = +2

Query: 2 IPEALTKAGILNTPSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITPGSVNTDP 181
IPE LTK GILNTPSWY+AGE EYFTDTTTLF+VEL F+GWAEGRRWADI+ PG VNTDP
Sbjct: 122 IPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELFFIGWAEGRRWADILKPGCVNTDP 181

Query: 182 IFTNNKLTGTDVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAIY 361
IF NNKLTGTDVGYPGG WFDPLGWGSGSPEK+KELRTKEIKNGRLAMLAVMGAWFQ IY
Sbjct: 182 IFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIY 241

Query: 362 TGTGPIDNLAAHLSDPGHNTIFSAFLSK 445
TGTGPIDNL AHL+DPGH T+FSAF K
Sbjct: 242 TGTGPIDNLFAHLADPGHATVFSAFTPK 269



Score = 34.7 bits (78), Expect = 3.7
Identities = 22/54 (40%), Positives = 26/54 (48%)
Frame = +2

Query: 212 DVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAIYTGTG 373
D PG F FDPLG GS PE L+ E+ + R AML G + T G
Sbjct: 78 DGSLPGDFGFDPLGLGS-DPETLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIG 130


>tr|A7QP61|A7QP61_VITVI Chromosome chr1 scaffold_136, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00002813001
PE=4 SV=1
Length = 270

Score = 278 bits (710), Expect = 2e-73
Identities = 128/148 (86%), Positives = 136/148 (91%)
Frame = +2

Query: 2 IPEALTKAGILNTPSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITPGSVNTDP 181
IPE LTK GILNTPSWY+AGE EYFTD TTLF+VE+IF+GWAEGRRWADII PG VNTDP
Sbjct: 123 IPEFLTKIGILNTPSWYTAGELEYFTDKTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDP 182

Query: 182 IFTNNKLTGTDVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAIY 361
IF NNKLTGTDVGYPGG WFDPLGWGSGSP+K+KELRTKEIKNGRLAMLAVMGAWFQAIY
Sbjct: 183 IFPNNKLTGTDVGYPGGLWFDPLGWGSGSPDKIKELRTKEIKNGRLAMLAVMGAWFQAIY 242

Query: 362 TGTGPIDNLAAHLSDPGHNTIFSAFLSK 445
TGTGPIDNL AHL+DPGH TIF+AF K
Sbjct: 243 TGTGPIDNLFAHLADPGHATIFAAFTPK 270



Score = 38.9 bits (89), Expect = 0.19
Identities = 24/54 (44%), Positives = 27/54 (50%)
Frame = +2

Query: 212 DVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAIYTGTG 373
D PG F FDPLG GS PE LK + EI + R AML G + T G
Sbjct: 79 DGSLPGDFGFDPLGLGS-DPETLKWMVQSEIVHCRWAMLGAAGIFIPEFLTKIG 131


>tr|A5B4F0|A5B4F0_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_033663 PE=4 SV=1
Length = 272

Score = 278 bits (710), Expect = 2e-73
Identities = 128/148 (86%), Positives = 136/148 (91%)
Frame = +2

Query: 2 IPEALTKAGILNTPSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITPGSVNTDP 181
IPE LTK GILNTPSWY+AGE EYFTD TTLF+VE+IF+GWAEGRRWADII PG VNTDP
Sbjct: 125 IPEFLTKIGILNTPSWYTAGELEYFTDKTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDP 184

Query: 182 IFTNNKLTGTDVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAIY 361
IF NNKLTGTDVGYPGG WFDPLGWGSGSP+K+KELRTKEIKNGRLAMLAVMGAWFQAIY
Sbjct: 185 IFPNNKLTGTDVGYPGGLWFDPLGWGSGSPDKIKELRTKEIKNGRLAMLAVMGAWFQAIY 244

Query: 362 TGTGPIDNLAAHLSDPGHNTIFSAFLSK 445
TGTGPIDNL AHL+DPGH TIF+AF K
Sbjct: 245 TGTGPIDNLFAHLADPGHATIFAAFTPK 272



Score = 38.9 bits (89), Expect = 0.19
Identities = 24/54 (44%), Positives = 27/54 (50%)
Frame = +2

Query: 212 DVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAIYTGTG 373
D PG F FDPLG GS PE LK + EI + R AML G + T G
Sbjct: 81 DGSLPGDFGFDPLGLGS-DPETLKWMVQSEIVHCRWAMLGAAGIFIPEFLTKIG 133


>tr|Q41038|Q41038_PEA Type II chlorophyll a/b binding protein from
photosystem I OS=Pisum sativum GN=lhaB PE=1 SV=1
Length = 269

Score = 276 bits (706), Expect = 6e-73
Identities = 127/148 (85%), Positives = 135/148 (91%)
Frame = +2

Query: 2 IPEALTKAGILNTPSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITPGSVNTDP 181
IPE LTK GILNTPSWY+AGE EYFTDTTTLF+VEL+F+GWAEGRRWADI+ PG VNTDP
Sbjct: 122 IPEFLTKLGILNTPSWYTAGEQEYFTDTTTLFIVELVFIGWAEGRRWADILNPGCVNTDP 181

Query: 182 IFTNNKLTGTDVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAIY 361
IF NNKLTGTDVGYPGG WFDPLGWGS SP+KLKELRTKEIKNGRLAMLAVMGAWFQ IY
Sbjct: 182 IFPNNKLTGTDVGYPGGLWFDPLGWGSASPQKLKELRTKEIKNGRLAMLAVMGAWFQHIY 241

Query: 362 TGTGPIDNLAAHLSDPGHNTIFSAFLSK 445
TGTGPIDNL AHL+DPGH TIF+AF K
Sbjct: 242 TGTGPIDNLFAHLADPGHATIFAAFTPK 269



Score = 36.2 bits (82), Expect = 1.3
Identities = 22/54 (40%), Positives = 26/54 (48%)
Frame = +2

Query: 212 DVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAIYTGTG 373
D PG F FDPLG GS PE L+ E+ + R AML G + T G
Sbjct: 78 DGSLPGDFGFDPLGLGS-DPESLRWNVQAELVHSRWAMLGAAGIFIPEFLTKLG 130


>tr|Q9SYW8|Q9SYW8_ARATH Lhca2 protein OS=Arabidopsis thaliana
GN=Lhca2 PE=2 SV=1
Length = 257

Score = 275 bits (704), Expect = 9e-73
Identities = 129/148 (87%), Positives = 134/148 (90%)
Frame = +2

Query: 2 IPEALTKAGILNTPSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITPGSVNTDP 181
IPE LTK GILNTPSWY+AGE EYFTD TTLFVVELI +GWAEGRRWADII PGSVNTDP
Sbjct: 110 IPEFLTKIGILNTPSWYTAGEQEYFTDKTTLFVVELILIGWAEGRRWADIIKPGSVNTDP 169

Query: 182 IFTNNKLTGTDVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAIY 361
+F NNKLTGTDVGYPGG WFDPLGWGSGSP KLKELRTKEIKNGRLAMLAVMGAWFQ IY
Sbjct: 170 VFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAVMGAWFQHIY 229

Query: 362 TGTGPIDNLAAHLSDPGHNTIFSAFLSK 445
TGTGPIDNL AHL+DPGH TIF+AF K
Sbjct: 230 TGTGPIDNLFAHLADPGHATIFAAFTPK 257



Score = 33.5 bits (75), Expect = 8.2
Identities = 22/54 (40%), Positives = 25/54 (46%)
Frame = +2

Query: 212 DVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAIYTGTG 373
D PG F FDPLG S P+ LK EI + R AML G + T G
Sbjct: 66 DGSLPGDFGFDPLGL-SSDPDSLKWNVQAEIVHCRWAMLGAAGIFIPEFLTKIG 118


>tr|Q9M320|Q9M320_ARATH Lhca2 protein OS=Arabidopsis thaliana
GN=At3g61470 PE=4 SV=1
Length = 257

Score = 275 bits (704), Expect = 9e-73
Identities = 129/148 (87%), Positives = 134/148 (90%)
Frame = +2

Query: 2 IPEALTKAGILNTPSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITPGSVNTDP 181
IPE LTK GILNTPSWY+AGE EYFTD TTLFVVELI +GWAEGRRWADII PGSVNTDP
Sbjct: 110 IPEFLTKIGILNTPSWYTAGEQEYFTDKTTLFVVELILIGWAEGRRWADIIKPGSVNTDP 169

Query: 182 IFTNNKLTGTDVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAIY 361
+F NNKLTGTDVGYPGG WFDPLGWGSGSP KLKELRTKEIKNGRLAMLAVMGAWFQ IY
Sbjct: 170 VFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAVMGAWFQHIY 229

Query: 362 TGTGPIDNLAAHLSDPGHNTIFSAFLSK 445
TGTGPIDNL AHL+DPGH TIF+AF K
Sbjct: 230 TGTGPIDNLFAHLADPGHATIFAAFTPK 257



Score = 33.5 bits (75), Expect = 8.2
Identities = 22/54 (40%), Positives = 25/54 (46%)
Frame = +2

Query: 212 DVGYPGGFWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAIYTGTG 373
D PG F FDPLG S P+ LK EI + R AML G + T G
Sbjct: 66 DGSLPGDFGFDPLGL-SSDPDSLKWNVQAEIVHCRWAMLGAAGIFIPEFLTKIG 118