NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK946722
Clone id YMU02A01NGRL0013_I11
Library
Length 555
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0013_I11. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
AGAGCTCCAGATTAGCAGAGCAAAGGGAGAGTGATTGTACGCAGTATTCAGTATGGCCAT
CTCCATAGCCGCTTCCTCGGCAGTTGTCGCTCCTGGCTGCGCCCCCGCAGAGAGCTTGTC
AAAGAGCTTCTCTGGTCTCAAGGCCACTACCCTGTTCGCCCCCAAGAGCCCCAACCCGCT
CGCCATCTCTAATGGCAGCCGTGTGAGCGCCATGCTTGTGTGGAAGCCGTATGACAACAA
GAAGTTCGAGACTCTGTCCTACTTGCCGCCTTTGTCAAGTGAGCAGATTGCGAAGCAGGT
GGACTTCATGGTCCGAAAAGGCTGGACCCCTTGCATTGAGTTCGACAAAATCGGGAGCGT
GTACCGAGAGCACTTCCACGGCAGCGGCTACTACGATGGGCGGTACTGGGTGATGTGGAA
GCTGCCCATGTTTGGCTGCCAAGATGCCGCTGCTGTGCTGCGTGAAATTGCAGAGTGCGC
CAAGGAGTATCCTGAAGCCTTCATCCGCGTGCTGGGCTTTGACGCTAAGAGGCAGGTGCA
GGTCTCCGGCTTCCT
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 152
Score (bit) 181.0
E-value 2.0e-45
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946722|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0013_I11, 5'
         (555 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   181   2e-45
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   180   4e-45
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   178   2e-44
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   177   4e-44
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   176   5e-44
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai...   176   7e-44
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   176   9e-44
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   176   9e-44
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai...   176   9e-44
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   175   1e-43
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   175   1e-43
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   175   2e-43
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   174   2e-43
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...   174   2e-43
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...   174   3e-43
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha...   174   3e-43
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...   174   3e-43
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   173   4e-43
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   173   4e-43
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai...   173   6e-43
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch...   173   6e-43
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   172   8e-43
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...   172   8e-43
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   172   1e-42
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai...   172   1e-42
sp|Q39746|RBS4_FLAPR Ribulose bisphosphate carboxylase small cha...   172   1e-42
sp|P05346|RBS1_BRANA Ribulose bisphosphate carboxylase small cha...   172   1e-42
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai...   171   2e-42
sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chai...   171   3e-42
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai...   171   3e-42

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  181 bits (459), Expect = 2e-45
 Identities = 86/152 (56%), Positives = 107/152 (70%), Gaps = 5/152 (3%)
 Frame = +2

Query: 113 SLSKSFSGLKATTLF--APKSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSS 280
           SL+  F+GLK+   F    K+ N  +   SNG RV  M VW P   KK+ETLSYLPPLS 
Sbjct: 21  SLAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSD 80

Query: 281 EQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAV 457
           E ++K++D+++R  W PC+EF+ + G VYREH H  GYYDGRYW MWKLPMFGC D+A V
Sbjct: 81  EALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQV 140

Query: 458 LREIAECAKEYPEAFIRVLGFDAKRQVQVSGF 553
           ++E+ EC KEYP AFIRV+GFD  RQVQ   F
Sbjct: 141 MKEVGECKKEYPNAFIRVIGFDNIRQVQCISF 172


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
          Length = 182

 Score =  180 bits (457), Expect = 4e-45
 Identities = 90/157 (57%), Positives = 113/157 (71%), Gaps = 6/157 (3%)
 Frame = +2

Query: 101 APAES-LSKSFSGLKATTLF--APKSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYL 265
           +PA+S +   F+ LK+T+ F    K+ N +    SNG RV  M VW P   KKFETLSYL
Sbjct: 18  SPAQSSMVAPFTCLKSTSAFPVTQKTNNDITSIASNGGRVQCMQVWPPLGLKKFETLSYL 77

Query: 266 PPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQ 442
           PPLSSEQ+AK+VD+++RK   PC+EF+ + G VYREH    GYYDGRYW MWKLPMFGC 
Sbjct: 78  PPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCN 137

Query: 443 DAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGF 553
           D++ VL+E+ EC K YP AFIR++GFD KRQVQ+  F
Sbjct: 138 DSSQVLKELEECKKAYPSAFIRIIGFDNKRQVQIISF 174


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
          Length = 177

 Score =  178 bits (451), Expect = 2e-44
 Identities = 88/155 (56%), Positives = 108/155 (69%), Gaps = 5/155 (3%)
 Frame = +2

Query: 104 PAES-LSKSFSGLKATTLFAP--KSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLP 268
           PA+S +   F+GL+++  F    K+ N L+   SNG RVS M VW P   KKFETLSYLP
Sbjct: 17  PAQSSMVAPFNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLP 76

Query: 269 PLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDA 448
           PLS E +AK+VD+++R  W PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC DA
Sbjct: 77  PLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDA 136

Query: 449 AAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGF 553
           + V+ E+ E  K YPE F+R++GFD KRQVQ   F
Sbjct: 137 SQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISF 171


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
          Length = 177

 Score =  177 bits (448), Expect = 4e-44
 Identities = 85/146 (58%), Positives = 103/146 (70%), Gaps = 4/146 (2%)
 Frame = +2

Query: 128 FSGLKATTLFAP--KSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 295
           F+GL+++  F    K+ N L+   SNG RVS M VW P   KKFETLSYLPPLS E +AK
Sbjct: 26  FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 296 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 475
           +VD+++R  W PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC DA+ V+ E+ E
Sbjct: 86  EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEE 145

Query: 476 CAKEYPEAFIRVLGFDAKRQVQVSGF 553
             K YPE F+R++GFD KRQVQ   F
Sbjct: 146 AKKAYPEYFVRIIGFDNKRQVQCISF 171


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  176 bits (447), Expect = 5e-44
 Identities = 86/158 (54%), Positives = 109/158 (68%), Gaps = 7/158 (4%)
 Frame = +2

Query: 101 APAES-LSKSFSGLKA------TTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLS 259
           +PA+S +   F+GL +      T  FA  S  P   SNG RV  M VW P   KKFETLS
Sbjct: 16  SPAQSNMVVPFAGLHSSAAFPVTRKFADSSKLP---SNGLRVRCMQVWPPEGKKKFETLS 72

Query: 260 YLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGC 439
           YLPPL+ EQ+ ++VD+++R GW PCIEF K+G VYRE+ +  GYYDGRYW MWKLPMFGC
Sbjct: 73  YLPPLTREQLGQEVDYLIRNGWIPCIEFCKVGFVYREYHNSPGYYDGRYWTMWKLPMFGC 132

Query: 440 QDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGF 553
            D++ VL+E+ EC+K YP+ F R++GFD  RQVQ   F
Sbjct: 133 TDSSQVLKEVDECSKAYPDYFNRIIGFDNTRQVQCISF 170


>sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Trifolium repens GN=RBCS PE=3 SV=1
          Length = 178

 Score =  176 bits (446), Expect = 7e-44
 Identities = 86/156 (55%), Positives = 113/156 (72%), Gaps = 5/156 (3%)
 Frame = +2

Query: 101 APAES-LSKSFSGLKATTLF-APKSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYLP 268
           AP ++ L+  F+GLK++  F   K  N +    SNGSRV+ M VW P   KKFETLSYLP
Sbjct: 15  APVQANLATPFTGLKSSAGFPVTKKNNDITSITSNGSRVNCMQVWPPVGKKKFETLSYLP 74

Query: 269 PLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQD 445
           PL+ EQ+ K+V++++RKGW PC+EF+ + G V+R++    GYYDGRYW MW+LP+FG  D
Sbjct: 75  PLTDEQLLKEVEYLLRKGWVPCVEFELEKGFVHRQYNSSPGYYDGRYWTMWRLPLFGTTD 134

Query: 446 AAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGF 553
           AA VL+E+AEC  EYPEAFIR++GFD  RQVQ   F
Sbjct: 135 AAQVLKEVAECKAEYPEAFIRIIGFDNVRQVQCISF 170


>sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1
          Length = 183

 Score =  176 bits (445), Expect = 9e-44
 Identities = 87/156 (55%), Positives = 113/156 (72%), Gaps = 5/156 (3%)
 Frame = +2

Query: 101 APAES-LSKSFSGLKATTLF--APKSPNPLAI-SNGSRVSAMLVWKPYDNKKFETLSYLP 268
           APA++ +   F+GLK+++ F    KS +  +I SNG RV  M VW P   KKFETLSYLP
Sbjct: 20  APAQARMVAPFNGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLP 79

Query: 269 PLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQD 445
           PLSSE +AK+VD+++RK W PC+EF+ + G VYRE+    GYYDGRYW MWKLPMFGC D
Sbjct: 80  PLSSESLAKEVDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTMWKLPMFGCTD 139

Query: 446 AAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGF 553
           ++ VL+E+ E  K YP++FIR++GFD  RQVQ   F
Sbjct: 140 SSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISF 175


>sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1
          Length = 171

 Score =  176 bits (445), Expect = 9e-44
 Identities = 85/159 (53%), Positives = 108/159 (67%), Gaps = 8/159 (5%)
 Frame = +2

Query: 101 APAESLSKSFSGLKATTLFAP--KSPNPLA------ISNGSRVSAMLVWKPYDNKKFETL 256
           A A ++  +F+GLK+T  F    K  N  A       SNG RV  M VW P+ N KFETL
Sbjct: 7   AGAATVVSAFTGLKSTAQFPSSFKMSNAAAEWEQKTTSNGGRVRCMQVWPPFGNPKFETL 66

Query: 257 SYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFG 436
           SYLP L+ EQ+ K+V++++R  W PC+EFD  GS+ R++    GYYDGRYWVMWKLPMFG
Sbjct: 67  SYLPTLTEEQLVKEVEYLLRNKWVPCLEFDLEGSISRKYNRSPGYYDGRYWVMWKLPMFG 126

Query: 437 CQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGF 553
           C +A+ V+ E+ ECAK YP+AFIRV+GFD  RQVQ   F
Sbjct: 127 CTEASQVINEVRECAKAYPKAFIRVIGFDNVRQVQCISF 165


>sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Capsicum annuum GN=RBCS PE=2 SV=1
          Length = 187

 Score =  176 bits (445), Expect = 9e-44
 Identities = 84/156 (53%), Positives = 105/156 (67%), Gaps = 5/156 (3%)
 Frame = +2

Query: 101 APAESLSKSFSGLKATTLFAPKSPNPLAI----SNGSRVSAMLVWKPYDNKKFETLSYLP 268
           A   S+  SF+GLK+   F       L I    SNG RV  MLVW P + KK+ETLSYLP
Sbjct: 17  AAQASMIASFNGLKSAASFPVTRKQDLDITSIASNGGRVECMLVWPPINKKKYETLSYLP 76

Query: 269 PLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQD 445
            LS EQ+ K+++++++KGW PC+EF+ + G VYREH    GYYDGRYW MWKLPMFGC D
Sbjct: 77  DLSDEQLLKEIEYLLQKGWVPCLEFETEHGFVYREHHRSPGYYDGRYWTMWKLPMFGCTD 136

Query: 446 AAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGF 553
           A  VL E+ E  K YP+A+IR++GFD  RQVQ   F
Sbjct: 137 ATQVLNEVQEAKKAYPQAWIRIIGFDNVRQVQCISF 172


>sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Helianthus annuus GN=RBCS PE=2 SV=1
          Length = 178

 Score =  175 bits (444), Expect = 1e-43
 Identities = 85/152 (55%), Positives = 110/152 (72%), Gaps = 5/152 (3%)
 Frame = +2

Query: 101 APAES-LSKSFSGLKATTLF-APKSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLP 268
           APA++ +   F+GLK+   F   K  N  +   SNG RV  M VW P   KK+ETLSYLP
Sbjct: 15  APAQANMVAPFTGLKSNAAFPTTKKANDFSTLPSNGGRVQCMKVWPPLGLKKYETLSYLP 74

Query: 269 PLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQD 445
           PL+  Q+AK+VD+++RK W PC+EF+ + G VYRE+    GYYDGRYW MWKLPMFGC D
Sbjct: 75  PLTETQLAKEVDYLLRKKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTD 134

Query: 446 AAAVLREIAECAKEYPEAFIRVLGFDAKRQVQ 541
           +A V++E+AEC KEYP+A+IR++GFD  RQVQ
Sbjct: 135 SAQVMKELAECKKEYPQAWIRIIGFDNVRQVQ 166
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 155
Score (bit) 287.0
E-value 3.0e-76
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946722|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0013_I11, 5'
         (555 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   287   3e-76
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   198   2e-49
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   197   3e-49
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   194   2e-48
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   194   3e-48
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   193   6e-48
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   191   2e-47
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c...   186   7e-46
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c...   185   2e-45
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c...   184   3e-45
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   183   5e-45
tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c...   181   2e-44
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c...   181   2e-44
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   181   2e-44
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c...   181   2e-44
tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c...   181   3e-44
tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c...   181   3e-44
tr|A9SRS0|A9SRS0_PHYPA Ribulose bisphosphate carboxylase small c...   180   4e-44
tr|A9U4X8|A9U4X8_PHYPA Ribulose bisphosphate carboxylase small c...   179   1e-43
tr|A9U4X7|A9U4X7_PHYPA Ribulose bisphosphate carboxylase small c...   179   1e-43
tr|A9SCN2|A9SCN2_PHYPA Ribulose bisphosphate carboxylase small c...   178   2e-43
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c...   177   3e-43
tr|A9S8M9|A9S8M9_PHYPA Ribulose bisphosphate carboxylase small c...   177   3e-43
tr|A9S8M6|A9S8M6_PHYPA Ribulose bisphosphate carboxylase small c...   177   3e-43
tr|A9RG04|A9RG04_PHYPA Ribulose bisphosphate carboxylase small c...   176   6e-43
tr|Q6RWD8|Q6RWD8_CAPAN Ribulose bisphosphate carboxylase small c...   176   1e-42
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c...   175   1e-42
tr|Q0WVH4|Q0WVH4_ARATH Ribulose bisphosphate carboxylase small c...   175   1e-42
tr|A9U377|A9U377_PHYPA Ribulose bisphosphate carboxylase small c...   175   2e-42
tr|Q9FEE4|Q9FEE4_WHEAT Ribulose bisphosphate carboxylase small c...   174   2e-42

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  287 bits (734), Expect = 3e-76
 Identities = 135/155 (87%), Positives = 145/155 (93%), Gaps = 1/155 (0%)
 Frame = +2

Query: 92  PGCAPA-ESLSKSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLP 268
           P CA A ESLSKSFSGLKA TLFAPK  NPLAISNGSR+SAMLVWKPYDNKKFETLSYLP
Sbjct: 13  PSCAAAAESLSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLP 72

Query: 269 PLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDA 448
           PL+++QIAKQV++MVRKGWTPCIEFD IGSVYREHFHGSGYYDGRYW+MWKLPMFGC D+
Sbjct: 73  PLTNDQIAKQVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDS 132

Query: 449 AAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGF 553
            +VLREIAECAKEYP AFIRVLGFDAKRQVQV+GF
Sbjct: 133 GSVLREIAECAKEYPTAFIRVLGFDAKRQVQVAGF 167


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  198 bits (503), Expect = 2e-49
 Identities = 96/158 (60%), Positives = 115/158 (72%), Gaps = 4/158 (2%)
 Frame = +2

Query: 92  PGCAPAESLS-KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLP 268
           P     ES S K FSGLK+TTLFA K+    ++ NGSRV  M VW P    KFET SYLP
Sbjct: 16  PAAVCRESSSVKQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLP 75

Query: 269 PLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGC 439
           PL+ +QIAKQVDFM+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC
Sbjct: 76  PLTDDQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGC 135

Query: 440 QDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGF 553
            D+A VLREI EC + +P  ++RVLGFD+K+QVQ+ GF
Sbjct: 136 TDSAQVLREIQECKQSFPSCWVRVLGFDSKKQVQICGF 173


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  197 bits (501), Expect = 3e-49
 Identities = 93/155 (60%), Positives = 117/155 (75%), Gaps = 4/155 (2%)
 Frame = +2

Query: 101 APAESLS-KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLS 277
           AP+ES S K+FSGLK+ TLF+ K+    ++ NGSRV  M VW P    KFET SYLPPL+
Sbjct: 54  APSESSSVKAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLT 113

Query: 278 SEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDA 448
            +QIAKQVD+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D+
Sbjct: 114 DDQIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDS 173

Query: 449 AAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGF 553
           + VLREI EC  ++P  ++RVLGFD+K+QVQ+ GF
Sbjct: 174 SQVLREIQECKSQFPSCWVRVLGFDSKKQVQICGF 208


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  194 bits (494), Expect = 2e-48
 Identities = 93/155 (60%), Positives = 114/155 (73%), Gaps = 3/155 (1%)
 Frame = +2

Query: 98  CAPAESLSKSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLS 277
           C  + S+ K FSGLK+TTL A K+    ++ NGSRV  M VW P    KFET SYLPPL+
Sbjct: 20  CRESSSV-KQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLT 78

Query: 278 SEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDA 448
            +QIAKQVDFM+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D+
Sbjct: 79  DDQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDS 138

Query: 449 AAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGF 553
           A VLREI EC + +P  ++RVLGFD+K+QVQ+ GF
Sbjct: 139 AQVLREIQECKQSFPSCWVRVLGFDSKKQVQICGF 173


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
           PE=2 SV=1
          Length = 184

 Score =  194 bits (492), Expect = 3e-48
 Identities = 93/155 (60%), Positives = 113/155 (72%), Gaps = 4/155 (2%)
 Frame = +2

Query: 101 APAESLS-KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLS 277
           A  ES S K+FSGLK+ TLF  KS    ++ NGSRV  M VW P    KFET SYLPPLS
Sbjct: 24  ASRESSSVKAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLS 83

Query: 278 SEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDA 448
            +QIA+QVD+M+++   PCIEFD +G+V R +F G   SGYYDGRYW MWKLPMFGC D+
Sbjct: 84  DDQIARQVDYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDS 143

Query: 449 AAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGF 553
           + VLREI EC   YP  ++RVLGFD+K+QVQ+ GF
Sbjct: 144 SQVLREIQECKTSYPSCWVRVLGFDSKKQVQICGF 178


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score =  193 bits (490), Expect = 6e-48
 Identities = 89/147 (60%), Positives = 110/147 (74%), Gaps = 3/147 (2%)
 Frame = +2

Query: 122 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 301
           K+FSGLK  TLF+ K+    A+ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 32  KAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 91

Query: 302 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 472
           D+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++ VLREI 
Sbjct: 92  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 473 ECAKEYPEAFIRVLGFDAKRQVQVSGF 553
           EC  ++P  ++RVLGFD+K+QVQ+ GF
Sbjct: 152 ECKSQFPSCWVRVLGFDSKKQVQICGF 178


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_225236 PE=3 SV=1
          Length = 183

 Score =  191 bits (485), Expect = 2e-47
 Identities = 89/158 (56%), Positives = 115/158 (72%), Gaps = 4/158 (2%)
 Frame = +2

Query: 92  PGCAPAESLS-KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLP 268
           P     +S S K+FSGLK+ TLF+ ++    ++ NGSRV  M VW P    KFET SYLP
Sbjct: 20  PAAVSRDSTSVKAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLP 79

Query: 269 PLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGC 439
           PL+ ++IAKQVD+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC
Sbjct: 80  PLTDDEIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGC 139

Query: 440 QDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGF 553
            D++ VLREI EC  ++P  ++RVLGFD+K+QVQ+ GF
Sbjct: 140 TDSSQVLREIQECKTQFPSCWVRVLGFDSKKQVQICGF 177


>tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_123666 PE=3 SV=1
          Length = 181

 Score =  186 bits (472), Expect = 7e-46
 Identities = 89/154 (57%), Positives = 111/154 (72%), Gaps = 1/154 (0%)
 Frame = +2

Query: 95  GCAPAESLS-KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPP 271
           G + +ES S K+FSGLK+ TLF+ +S    ++ NGSRV+ M VW P    KFET SYLPP
Sbjct: 22  GVSTSESTSVKAFSGLKSATLFSSQSQQLSSVQNGSRVNCMQVWNPIGMTKFETFSYLPP 81

Query: 272 LSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAA 451
           LS + IAKQV++M+++   PC+EFD    V RE+    GYYDGRYW MWKLPMFGCQD+A
Sbjct: 82  LSDDAIAKQVEYMIQQKLIPCLEFDNSKGVTRENNSSPGYYDGRYWTMWKLPMFGCQDSA 141

Query: 452 AVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGF 553
            VLREI EC K +P  F+RVLGFD  +QVQ+ GF
Sbjct: 142 QVLREIEECKKTFPGCFVRVLGFDNVKQVQICGF 175


>tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_115069 PE=3 SV=1
          Length = 181

 Score =  185 bits (469), Expect = 2e-45
 Identities = 88/156 (56%), Positives = 109/156 (69%), Gaps = 5/156 (3%)
 Frame = +2

Query: 101 APAESLS-----KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYL 265
           +PA S S     K+FSGLK+ T+F+ K+ N  ++ NGSRV  M VW P    KFET SYL
Sbjct: 20  SPAASTSGSTTVKAFSGLKSATVFSGKAQNSSSVQNGSRVQCMQVWNPIGMTKFETFSYL 79

Query: 266 PPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQD 445
           PPLS + IAKQV++M+++   PC+EFD    V R +    GYYDGRYW MWKLPMFGCQD
Sbjct: 80  PPLSDDAIAKQVEYMIQQKLIPCLEFDNANGVSRTNNSSPGYYDGRYWTMWKLPMFGCQD 139

Query: 446 AAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGF 553
           +A VLREI EC K +P  F+RVLGFD  +QVQ+ GF
Sbjct: 140 SAQVLREIEECKKTFPGCFVRVLGFDNVKQVQICGF 175


>tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_146969 PE=3 SV=1
          Length = 181

 Score =  184 bits (467), Expect = 3e-45
 Identities = 88/150 (58%), Positives = 108/150 (72%), Gaps = 1/150 (0%)
 Frame = +2

Query: 107 AESLS-KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSE 283
           +ES S K+FSGLK++TLF+ K+ +  ++ NGSRV  M VW P    KFET SYLPPLS +
Sbjct: 26  SESTSVKAFSGLKSSTLFSSKAQSLSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDD 85

Query: 284 QIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLR 463
            IAKQVD+M+++   PC+EFD    V R +    GYYDGRYW MWKLPMFGCQD A VLR
Sbjct: 86  AIAKQVDYMIQQKLIPCLEFDNADGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDPAQVLR 145

Query: 464 EIAECAKEYPEAFIRVLGFDAKRQVQVSGF 553
           EI EC K +P  F+RVLGFD  +QVQ+ GF
Sbjct: 146 EIEECKKTFPGCFVRVLGFDNVKQVQICGF 175