DK946729
Clone id YMU02A01NGRL0013_I22
Library
Length 402
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0013_I22. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GAAGCAGTGGTATCAACGCAGAGTGGCCATTACGGGGAAAGCAGTGGTATCAACGCAGAG
TGGCCATTACGGCCGGGCGTCGGGAAAGCATTTTAGGGTAGCGAAGTCACGAATGCAGTG
AAAAGCAAGAAACAAACAAAAGCATGTGAAGCTTCTGGCAATGGCAATGAATGCCAGTCT
GCTGTCAATAATCATTTTTGCCTGAGCTATGAAATGTACAATACATTAAGAAACTGGTTA
CTGGAGCACATATAGCGGAATGAGAAGCACAATAGTTGAAGTCAGAATATGGCAAAGGGA
GAAAGGTAAGTAATTATTGTGATCAACTCCTTGGCAAAGCTCCTAAGATTTTGAAGTTAG
ATTTGCTTTGTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P24043
Definition sp|P24043|LAMA2_HUMAN Laminin subunit alpha-2 OS=Homo sapiens
Align length 24
Score (bit) 28.9
E-value 8.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946729|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0013_I22, 5'
(296 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P24043|LAMA2_HUMAN Laminin subunit alpha-2 OS=Homo sapiens GN... 29 8.5

>sp|P24043|LAMA2_HUMAN Laminin subunit alpha-2 OS=Homo sapiens
GN=LAMA2 PE=1 SV=4
Length = 3122

Score = 28.9 bits (63), Expect = 8.5
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1

Query: 194 CASHSAICAPVTSFLMYCTFHSSG 123
C HS++C P TS C H++G
Sbjct: 1422 CNGHSSLCDPETSICQNCQHHTAG 1445


tr_hit_id B6NL95
Definition tr|B6NL95|B6NL95_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae
Align length 67
Score (bit) 33.5
E-value 5.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946729|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0013_I22, 5'
(296 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6NL95|B6NL95_BRAFL Putative uncharacterized protein OS=Branc... 33 5.4
tr|Q7PGS4|Q7PGS4_ANOGA Candidate odorant receptor (AGAP003054-PA... 33 9.2
tr|Q5TTI9|Q5TTI9_ANOGA AGAP003055-PA OS=Anopheles gambiae GN=AGA... 33 9.2

>tr|B6NL95|B6NL95_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_231698 PE=4 SV=1
Length = 744

Score = 33.5 bits (75), Expect = 5.4
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Frame = -2

Query: 226 FSLCHILTSTIVLLIPLYVLQ*PVS*CI---VHFIAQAKMIIDSR----LAFIAIARSFT 68
F C LT + +L+ ++L P++ C + I + I+D+R +AF+ S T
Sbjct: 273 FFFCRFLTYSYLLVFNAWLLLAPITLCYDWQMGSIPLVESILDTRNLATIAFVVTMVSLT 332

Query: 67 CFCLFLA 47
+CLFLA
Sbjct: 333 AYCLFLA 339


>tr|Q7PGS4|Q7PGS4_ANOGA Candidate odorant receptor (AGAP003054-PA)
OS=Anopheles gambiae GN=GPROR25 PE=3 SV=3
Length = 357

Score = 32.7 bits (73), Expect = 9.2
Identities = 20/65 (30%), Positives = 29/65 (44%)
Frame = -3

Query: 270 LRSFAKELITIITYLSPFAIF*LQLLCFSFRYMCSSNQFLNVLYIS*LRQK*LLTADWHS 91
L A E+I I + +F L LLCFS + + L+ S DWH+
Sbjct: 258 LNVIADEVINAIWFFLIAVVFQLSLLCFSGNLLLIESDSLSSCVYS---------IDWHA 308

Query: 90 LPLPE 76
+P+PE
Sbjct: 309 MPVPE 313


>tr|Q5TTI9|Q5TTI9_ANOGA AGAP003055-PA OS=Anopheles gambiae
GN=AGAP003055 PE=3 SV=2
Length = 176

Score = 32.7 bits (73), Expect = 9.2
Identities = 20/65 (30%), Positives = 29/65 (44%)
Frame = -3

Query: 270 LRSFAKELITIITYLSPFAIF*LQLLCFSFRYMCSSNQFLNVLYIS*LRQK*LLTADWHS 91
L A E+I I + +F L LLCFS + + L+ S DWH+
Sbjct: 87 LNVIADEVINAIWFFLIAVVFQLSLLCFSGNLLLIESDSLSSCVYS---------IDWHA 137

Query: 90 LPLPE 76
+P+PE
Sbjct: 138 MPVPE 142