DK946743 |
Clone id |
YMU02A01NGRL0013_J17 |
Library |
YMU02 |
Length |
504 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0013_J17. 5' end sequence. |
Accession |
DK946743 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL1474Contig1 |
Sequence |
TGAAGGAGGTGCCCAATGCCATTCAGATGACTCTTGGCAATGTCGGTGGGATGGCTTATA CTCATCACAAGCAAGCTCTGTTGCGGCCCAGGTCCTTCGCCGCAATAGATGGAATCTTCT GCATGTTTCAAGGAAATTTGGAGAATCTTACAGCATTACGACAAGAATATGGGCTTGCAA AGAATGCGAATGAGGTCCTGCTCATCATCCAGGCATATAAAACCTTGCGTGATCGGGGTC CATTCCCGGCTGACAAGGTTGTGGCAGCACTAGTTGGGCACTTTGTCTTTGTTCTCTATG ATACAAGCAACCGTGTAGTCTTTGTTGCACAGGACTGCGAGTGTAAGATCCCCTTCTATT GGGGCACAGCGGCAGACAAGTCTCTTGCTTTCTCGGACACTCCGGAGGTTCTCAAGGCTG GCTGTGGAAAATCTTTTGCACCTTTTCCTGCTGGTTGCTATTTCTCTAGCAATGTGGGGC TAAAGAGCTATGAGCACCCACTTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P24805 |
Definition |
sp|P24805|TSJT1_TOBAC Stem-specific protein TSJT1 OS=Nicotiana tabacum |
Align length |
100 |
Score (bit) |
96.7 |
E-value |
6.0e-20 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK946743|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0013_J17, 5' (504 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P24805|TSJT1_TOBAC Stem-specific protein TSJT1 OS=Nicotiana t... 97 6e-20 sp|Q54MB4|ASNS_DICDI Probable asparagine synthetase [glutamine-h... 47 4e-05 sp|Q43011|ASNS_ORYSJ Asparagine synthetase [glutamine-hydrolyzin... 44 4e-04 sp|P22106|ASNB_ECOLI Asparagine synthetase B [glutamine-hydrolyz... 44 4e-04 sp|P49094|ASNS_MAIZE Asparagine synthetase [glutamine-hydrolyzin... 43 7e-04 sp|P31752|ASNS_ASPOF Asparagine synthetase [glutamine-hydrolyzin... 38 0.023 sp|P49088|ASNS_RAT Asparagine synthetase [glutamine-hydrolyzing]... 37 0.068 sp|Q61024|ASNS_MOUSE Asparagine synthetase [glutamine-hydrolyzin... 37 0.068 sp|O24338|ASNS_SANAU Asparagine synthetase [glutamine-hydrolyzin... 35 0.20 sp|P17714|ASNS_MESAU Asparagine synthetase [glutamine-hydrolyzin... 35 0.20 sp|P19891|ASNS_CRIGR Asparagine synthetase [glutamine-hydrolyzin... 35 0.20 sp|Q5ZJU3|ASNS_CHICK Asparagine synthetase [glutamine-hydrolyzin... 35 0.20 sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3... 32 2.2 sp|P08243|ASNS_HUMAN Asparagine synthetase [glutamine-hydrolyzin... 32 2.2 sp|Q1LZA3|ASNS_BOVIN Asparagine synthetase [glutamine-hydrolyzin... 31 2.9 sp|Q2PC93|SSPO_CHICK SCO-spondin OS=Gallus gallus GN=SSPO PE=2 SV=1 31 2.9 sp|P26046|ACVS2_PENCH N-(5-amino-5-carboxypentanoyl)-L-cysteinyl... 31 3.7 sp|P19787|ACVS1_PENCH N-(5-amino-5-carboxypentanoyl)-L-cysteinyl... 31 3.7 sp|Q3UTJ2|SRBS2_MOUSE Sorbin and SH3 domain-containing protein 2... 30 4.9 sp|Q28BS5|FOXF1_XENTR Forkhead box protein F1 OS=Xenopus tropica... 30 6.4 sp|Q9PL03|Y305_CHLMU Uncharacterized protein TC_0305 OS=Chlamydi... 30 8.3 sp|Q9W707|FXF1B_XENLA Forkhead box protein F1-B OS=Xenopus laevi... 30 8.3 sp|Q9W706|FXF1A_XENLA Forkhead box protein F1-A OS=Xenopus laevi... 30 8.3
>sp|P24805|TSJT1_TOBAC Stem-specific protein TSJT1 OS=Nicotiana tabacum GN=TSJT1 PE=2 SV=1 Length = 149
Score = 96.7 bits (239), Expect = 6e-20 Identities = 42/100 (42%), Positives = 67/100 (67%) Frame = +3
Query: 33 LGNVGGMAYTHHKQALLRPRSFAAIDGIFCMFQGNLENLTALRQEYGLAKNANEVLLIIQ 212 L N MA++H + L+PRS +D +FC+F G L+N LR+ YGL++ A E +++++ Sbjct: 50 LFNGNFMAFSHGNENPLQPRSIVVMDDVFCIFSGALDNTFDLRKHYGLSRQATEAMIMVE 109
Query: 213 AYKTLRDRGPFPADKVVAALVGHFVFVLYDTSNRVVFVAQ 332 AYK LRDR P+P D+V+ L G F F+L+D+ +F+A+ Sbjct: 110 AYKVLRDRAPYPPDQVIKELEGKFAFILFDSKASTLFLAR 149
>sp|Q54MB4|ASNS_DICDI Probable asparagine synthetase [glutamine-hydrolyzing] OS=Dictyostelium discoideum GN=asns PE=1 SV=1 Length = 557
Score = 47.4 bits (111), Expect = 4e-05 Identities = 29/73 (39%), Positives = 36/73 (49%) Frame = +3
Query: 252 DKVVAALVGHFVFVLYDTSNRVVFVAQDCECKIPFYWGTAADKSLAFSDTPEVLKAGCGK 431 D V L G F FV+Y+ A+D +P Y G D S+ FS + +K C K Sbjct: 114 DDFVHMLDGDFAFVVYNKKANSFLAARDPIGVVPLYIGWHKDGSIWFSSEMKAIKDDCYK 173
Query: 432 SFAPFPAGCYFSS 470 F PFP G YFSS Sbjct: 174 -FQPFPPGHYFSS 185
>sp|Q43011|ASNS_ORYSJ Asparagine synthetase [glutamine-hydrolyzing] OS=Oryza sativa subsp. japonica GN=Os06g0265000 PE=2 SV=3 Length = 591
Score = 43.9 bits (102), Expect = 4e-04 Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Frame = +3
Query: 252 DKVVAALVGHFVFVLYDTSNRVVFVAQDCECKIPFYWGTAADKSLAFSDTPEVLKAGCGK 431 ++ V L G F FVL DT ++ A+D P Y G D S+ FS + L C + Sbjct: 111 EEFVDMLDGMFAFVLLDTRDKSFIAARDAIGICPLYMGWGLDGSVWFSSEMKALSDDC-E 169
Query: 432 SFAPFPAGCYFSSNV-GLKSYEHP 500 F FP G +SS GL+ + +P Sbjct: 170 RFISFPPGHLYSSKTGGLRRWYNP 193
>sp|P22106|ASNB_ECOLI Asparagine synthetase B [glutamine-hydrolyzing] OS=Escherichia coli (strain K12) GN=asnB PE=1 SV=3 Length = 554
Score = 43.9 bits (102), Expect = 4e-04 Identities = 38/126 (30%), Positives = 56/126 (44%), Gaps = 4/126 (3%) Frame = +3
Query: 132 GNLENLTALRQEYG---LAKNANEVLLIIQAYKTLRDRGPFPADKVVAALVGHFVFVLYD 302 G + N ALR EYG + ++ +I+ Y+ ++GP D L G F F LYD Sbjct: 76 GEIYNHQALRAEYGDRYQFQTGSDCEVILALYQ---EKGPEFLDD----LQGMFAFALYD 128
Query: 303 TSNRVVFVAQDCECKIPFYWGTAADKSLAFSDTPEVLKAGCGKSFAPFPAGCYFSSNVG- 479 + + +D IP Y G L + + L C ++ FPAG Y S G Sbjct: 129 SEKDAYLIGRDHLGIIPLYMGYDEHGQLYVASEMKALVPVC-RTIKEFPAGSYLWSQDGE 187
Query: 480 LKSYEH 497 ++SY H Sbjct: 188 IRSYYH 193
>sp|P49094|ASNS_MAIZE Asparagine synthetase [glutamine-hydrolyzing] OS=Zea mays GN=ASN1 PE=2 SV=2 Length = 586
Score = 43.1 bits (100), Expect = 7e-04 Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Frame = +3
Query: 252 DKVVAALVGHFVFVLYDTSNRVVFVAQDCECKIPFYWGTAADKSLAFSDTPEVLKAGCGK 431 ++ V L G F FVL DT ++ A+D P Y G D S+ FS + L C + Sbjct: 111 EEFVDMLDGMFSFVLLDTRDKSFIAARDAIGICPLYMGWGLDGSVWFSSEMKALSDDC-E 169
Query: 432 SFAPFPAGCYFSSNV-GLKSYEHP 500 F FP G +SS GL+ + +P Sbjct: 170 RFITFPPGHLYSSKTGGLRRWYNP 193
>sp|P31752|ASNS_ASPOF Asparagine synthetase [glutamine-hydrolyzing] OS=Asparagus officinalis PE=2 SV=2 Length = 590
Score = 38.1 bits (87), Expect = 0.023 Identities = 27/73 (36%), Positives = 32/73 (43%) Frame = +3
Query: 261 VAALVGHFVFVLYDTSNRVVFVAQDCECKIPFYWGTAADKSLAFSDTPEVLKAGCGKSFA 440 V L G F FVL DT N A+D P Y G D S+ S + L C + F Sbjct: 114 VDMLDGMFSFVLLDTRNNCFVAARDAVGITPLYIGWGLDGSVWLSSEMKGLNDDC-EHFE 172
Query: 441 PFPAGCYFSSNVG 479 FP G +SS G Sbjct: 173 VFPPGNLYSSRSG 185
>sp|P49088|ASNS_RAT Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus GN=Asns PE=2 SV=3 Length = 561
Score = 36.6 bits (83), Expect = 0.068 Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 3/95 (3%) Frame = +3
Query: 114 IFCMFQGNLENLTALRQEYGLAKNAN---EVLLIIQAYKTLRDRGPFPADKVVAALVGHF 284 ++ + G + N AL+Q + N E++L L D+G +K + L G F Sbjct: 70 LWLCYNGEIYNHKALQQRFEFEYQTNVDGEIIL------HLYDKGGI--EKTICMLDGVF 121
Query: 285 VFVLYDTSNRVVFVAQDCECKIPFYWGTAADKSLA 389 F+L DT+N+ VF+ +D P + D LA Sbjct: 122 AFILLDTANKKVFLGRDTYGVRPLFKALTEDGFLA 156
>sp|Q61024|ASNS_MOUSE Asparagine synthetase [glutamine-hydrolyzing] OS=Mus musculus GN=Asns PE=2 SV=3 Length = 561
Score = 36.6 bits (83), Expect = 0.068 Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 3/95 (3%) Frame = +3
Query: 114 IFCMFQGNLENLTALRQEYGLAKNAN---EVLLIIQAYKTLRDRGPFPADKVVAALVGHF 284 ++ + G + N AL+Q + N E++L L D+G +K + L G F Sbjct: 70 LWLCYNGEIYNHKALQQRFEFEYQTNVDGEIIL------HLYDKGGI--EKTICMLDGVF 121
Query: 285 VFVLYDTSNRVVFVAQDCECKIPFYWGTAADKSLA 389 F+L DT+N+ VF+ +D P + D LA Sbjct: 122 AFILLDTANKKVFLGRDTYGVRPLFKAMTEDGFLA 156
>sp|O24338|ASNS_SANAU Asparagine synthetase [glutamine-hydrolyzing] OS=Sandersonia aurantiaca GN=AND1 PE=2 SV=3 Length = 525
Score = 35.0 bits (79), Expect = 0.20 Identities = 25/76 (32%), Positives = 33/76 (43%) Frame = +3
Query: 252 DKVVAALVGHFVFVLYDTSNRVVFVAQDCECKIPFYWGTAADKSLAFSDTPEVLKAGCGK 431 + + L G F FVL D+ N A+D P Y G D S+ S + L C + Sbjct: 111 ESFIHMLDGIFSFVLLDSRNNSFVAARDAIGVTPLYIGWGLDGSVWISSEMKGLNDDC-E 169
Query: 432 SFAPFPAGCYFSSNVG 479 F FP G +SS G Sbjct: 170 HFKFFPPGHLYSSKEG 185
>sp|P17714|ASNS_MESAU Asparagine synthetase [glutamine-hydrolyzing] OS=Mesocricetus auratus GN=ASNS PE=1 SV=3 Length = 561
Score = 35.0 bits (79), Expect = 0.20 Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 3/95 (3%) Frame = +3
Query: 114 IFCMFQGNLENLTALRQEYGLAKNAN---EVLLIIQAYKTLRDRGPFPADKVVAALVGHF 284 ++ + G + N AL+Q + N E++L L D+G ++ + L G F Sbjct: 70 LWLCYNGEIYNHKALQQRFEFEYQTNVDGEIIL------HLYDKGGI--EQTICMLDGVF 121
Query: 285 VFVLYDTSNRVVFVAQDCECKIPFYWGTAADKSLA 389 F+L DT+N+ VF+ +D P + D LA Sbjct: 122 AFILLDTANKKVFLGRDTYGVRPLFKAMTEDGFLA 156
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9P0N0 |
Definition |
tr|A9P0N0|A9P0N0_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
161 |
Score (bit) |
216.0 |
E-value |
6.0e-55 |
Report |
|