DK946755
Clone id YMU02A01NGRL0013_K08
Library
Length 430
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0013_K08. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
CTTTTTTAACATTTGGGAACCTTCGTTCTAGCGCACCTGATCGCCTACGAGCTGTGCGAG
GAGTGCGCTTGATTGCAGCGATGAAGGTAGTCGCGGCTTACCTGCTGGCGCTGCTGGGGG
GCAACTGCTCGCCTTCCGCTGCCGACGTCAAGAATATTCTTGGCTCACTTGGTTCTGAAG
CTGACGATGACAGGATAGACTTGCTACTGAGCGAGTTGAAAGGCAAGGACATTGTGGAGC
TCATTGCTGCCGGAAAGGAGAAGCTTGCTTCTGTCCCTGCAGGTGGAGGTGGTGGCGTTG
TGGTCAGTGCAGGAGGTGGTGGTGGTGCAGGTCCTGCCGCAGCAGTTGAGGAGAAAAAGG
AGGAGAAAGAGGAAAAGAAGGAGCCCGAGGAGGAGTCCGATGATGACATGGGATTCAGTC
TGTTTGACTA
■■Homology search results ■■ -
sp_hit_id P42037
Definition sp|P42037|RLA2_ALTAL 60S acidic ribosomal protein P2 OS=Alternaria alternata
Align length 50
Score (bit) 72.0
E-value 9.0e-13
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946755|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0013_K08, 5'
(430 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P42037|RLA2_ALTAL 60S acidic ribosomal protein P2 OS=Alternar... 72 9e-13
sp|P41099|RLA2_PARAR 60S acidic ribosomal protein P2 OS=Partheni... 71 2e-12
sp|Q9SLF7|RLA22_ARATH 60S acidic ribosomal protein P2-2 OS=Arabi... 69 6e-12
sp|O01725|RLA2_BRAFL 60S acidic ribosomal protein P2 OS=Branchio... 69 1e-11
sp|Q8TFM9|RLA2_FUSCU 60S acidic ribosomal protein P2 OS=Fusarium... 68 1e-11
sp|O24415|RLA2B_MAIZE 60S acidic ribosomal protein P2B OS=Zea ma... 68 2e-11
sp|P51407|RLA21_ARATH 60S acidic ribosomal protein P2-1 OS=Arabi... 68 2e-11
sp|Q9C3Z5|RLA2_PODAN 60S acidic ribosomal protein P2 OS=Podospor... 66 7e-11
sp|Q9LXM8|RLA24_ARATH 60S acidic ribosomal protein P2-4 OS=Arabi... 65 1e-10
sp|Q6X9Z5|RLA2_HORSE 60S acidic ribosomal protein P2 OS=Equus ca... 64 3e-10
sp|P08094|RLA2_SCHPO 60S acidic ribosomal protein P2-alpha OS=Sc... 63 6e-10
sp|P42039|RLA2_CLAHE 60S acidic ribosomal protein P2 OS=Cladospo... 63 6e-10
sp|P46252|RLA2A_MAIZE 60S acidic ribosomal protein P2A OS=Zea ma... 62 7e-10
sp|P99027|RLA2_MOUSE 60S acidic ribosomal protein P2 OS=Mus musc... 62 1e-09
sp|P05387|RLA2_HUMAN 60S acidic ribosomal protein P2 OS=Homo sap... 62 1e-09
sp|P42899|RLA2_BOVIN 60S acidic ribosomal protein P2 OS=Bos taur... 61 2e-09
sp|P17478|RLA4_SCHPO 60S acidic ribosomal protein P2-beta OS=Sch... 61 2e-09
sp|O14317|RLA6_SCHPO 60S acidic ribosomal protein P2-C OS=Schizo... 60 3e-09
sp|P02401|RLA2_RAT 60S acidic ribosomal protein P2 OS=Rattus nor... 59 6e-09
sp|Q9UUZ6|RLA2_ASPFU 60S acidic ribosomal protein P2 OS=Aspergil... 59 8e-09
sp|Q9LH85|RLA23_ARATH 60S acidic ribosomal protein P2-3 OS=Arabi... 58 1e-08
sp|Q9HFQ4|RLA4_CANAL 60S acidic ribosomal protein P2-B OS=Candid... 57 2e-08
sp|Q29315|RLA2_PIG 60S acidic ribosomal protein P2 OS=Sus scrofa... 57 3e-08
sp|Q96UQ7|RLA2_RHOGU 60S acidic ribosomal protein P2 OS=Rhodotor... 56 5e-08
sp|Q9GPU2|RLA2_EUPRA 60S acidic ribosomal protein P2 OS=Euplotes... 56 5e-08
sp|Q9LUK2|RLA25_ARATH 60S acidic ribosomal protein P2-5 OS=Arabi... 56 5e-08
sp|Q9HFQ5|RLA2_CANAL 60S acidic ribosomal protein P2-A OS=Candid... 53 4e-07
sp|P02400|RLA4_YEAST 60S acidic ribosomal protein P2-beta OS=Sac... 53 6e-07
sp|O61463|RLA2_CRYST 60S acidic ribosomal protein P2 OS=Cryptoch... 52 8e-07
sp|P02399|RLA2_ARTSA 60S acidic ribosomal protein P2 OS=Artemia ... 51 2e-06

>sp|P42037|RLA2_ALTAL 60S acidic ribosomal protein P2 OS=Alternaria
alternata GN=ALTA5 PE=1 SV=1
Length = 113

Score = 72.0 bits (175), Expect = 9e-13
Identities = 36/50 (72%), Positives = 42/50 (84%)
Frame = +3

Query: 117 GGNCSPSAADVKNILGSLGSEADDDRIDLLLSELKGKDIVELIAAGKEKL 266
GGN SPSAADVK +L S+G EAD DR+D L+SEL+GKDI ELIA+G EKL
Sbjct: 13 GGNTSPSAADVKAVLESVGIEADSDRLDKLISELEGKDINELIASGSEKL 62


>sp|P41099|RLA2_PARAR 60S acidic ribosomal protein P2 OS=Parthenium
argentatum PE=3 SV=1
Length = 114

Score = 71.2 bits (173), Expect = 2e-12
Identities = 32/50 (64%), Positives = 45/50 (90%)
Frame = +3

Query: 117 GGNCSPSAADVKNILGSLGSEADDDRIDLLLSELKGKDIVELIAAGKEKL 266
GGN SP+ D+K+IL S+G++ADDD+I+LLLS++KGKDI ELIA+G+E+L
Sbjct: 13 GGNTSPTDEDLKSILASVGADADDDKIELLLSQVKGKDITELIASGRERL 62


>sp|Q9SLF7|RLA22_ARATH 60S acidic ribosomal protein P2-2
OS=Arabidopsis thaliana GN=RPP2B PE=1 SV=1
Length = 115

Score = 69.3 bits (168), Expect = 6e-12
Identities = 31/49 (63%), Positives = 42/49 (85%)
Frame = +3

Query: 120 GNCSPSAADVKNILGSLGSEADDDRIDLLLSELKGKDIVELIAAGKEKL 266
G SP++AD+K ILGS+G+E +D +I+LLL E+KGKD+ ELIAAG+EKL
Sbjct: 14 GKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGREKL 62


>sp|O01725|RLA2_BRAFL 60S acidic ribosomal protein P2
OS=Branchiostoma floridae PE=3 SV=1
Length = 116

Score = 68.6 bits (166), Expect = 1e-11
Identities = 38/104 (36%), Positives = 51/104 (49%)
Frame = +3

Query: 117 GGNCSPSAADVKNILGSLGSEADDDRIDLLLSELKGKDIVELIAAGKEKLXXXXXXXXXX 296
GGN +PSA D+K ILGS+G +A+D+R++ ++ ELKGKDI E++AAG+ KL
Sbjct: 13 GGNANPSAGDIKKILGSVGIDAEDERLNKVIGELKGKDIEEVMAAGRGKLSSMPSGGGVA 72

Query: 297 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 428
DDDMGF LFD
Sbjct: 73 AAAGGGGAAAGGGGAAPAAEEKKEEKKEESEEESDDDMGFGLFD 116


>sp|Q8TFM9|RLA2_FUSCU 60S acidic ribosomal protein P2 OS=Fusarium
culmorum PE=1 SV=1
Length = 109

Score = 68.2 bits (165), Expect = 1e-11
Identities = 33/50 (66%), Positives = 42/50 (84%)
Frame = +3

Query: 117 GGNCSPSAADVKNILGSLGSEADDDRIDLLLSELKGKDIVELIAAGKEKL 266
GGN SPSAADVK +L S+G +AD+DR++ L+SEL+GKDI +LIA G EKL
Sbjct: 13 GGNTSPSAADVKAVLTSVGIDADEDRLNKLISELEGKDIQQLIAEGSEKL 62


>sp|O24415|RLA2B_MAIZE 60S acidic ribosomal protein P2B OS=Zea mays
GN=RPP2B PE=1 SV=1
Length = 113

Score = 67.8 bits (164), Expect = 2e-11
Identities = 31/50 (62%), Positives = 44/50 (88%)
Frame = +3

Query: 117 GGNCSPSAADVKNILGSLGSEADDDRIDLLLSELKGKDIVELIAAGKEKL 266
GGN SP+A DVK+IL S+G+EAD+++++ LL+ELK KDI E+IAAG+E+L
Sbjct: 13 GGNTSPTADDVKSILESVGAEADEEKLEFLLTELKDKDITEVIAAGRERL 62


>sp|P51407|RLA21_ARATH 60S acidic ribosomal protein P2-1
OS=Arabidopsis thaliana GN=RPP2A PE=2 SV=2
Length = 115

Score = 67.8 bits (164), Expect = 2e-11
Identities = 30/49 (61%), Positives = 41/49 (83%)
Frame = +3

Query: 120 GNCSPSAADVKNILGSLGSEADDDRIDLLLSELKGKDIVELIAAGKEKL 266
G SP+ D+K+ILGS+G+E +D +I+LLL E+KGKD+ ELIAAG+EKL
Sbjct: 14 GKASPTTGDIKDILGSVGAETEDSQIELLLKEVKGKDLAELIAAGREKL 62


>sp|Q9C3Z5|RLA2_PODAN 60S acidic ribosomal protein P2 OS=Podospora
anserina PE=3 SV=1
Length = 111

Score = 65.9 bits (159), Expect = 7e-11
Identities = 32/50 (64%), Positives = 39/50 (78%)
Frame = +3

Query: 117 GGNCSPSAADVKNILGSLGSEADDDRIDLLLSELKGKDIVELIAAGKEKL 266
GG +PSAADVK +L S+G EAD DR+D L+SEL+GKD+ ELIA G KL
Sbjct: 13 GGKATPSAADVKAVLESVGIEADSDRLDKLISELEGKDVNELIAEGSSKL 62


>sp|Q9LXM8|RLA24_ARATH 60S acidic ribosomal protein P2-4
OS=Arabidopsis thaliana GN=RPP2D PE=2 SV=1
Length = 111

Score = 64.7 bits (156), Expect = 1e-10
Identities = 28/50 (56%), Positives = 42/50 (84%)
Frame = +3

Query: 117 GGNCSPSAADVKNILGSLGSEADDDRIDLLLSELKGKDIVELIAAGKEKL 266
GGN +PSA ++K+I+G++G++ D + I+LLL E+ GKDI ELIA+G+EKL
Sbjct: 13 GGNANPSADNIKDIIGAVGADVDGESIELLLKEVSGKDIAELIASGREKL 62


>sp|Q6X9Z5|RLA2_HORSE 60S acidic ribosomal protein P2 OS=Equus
caballus GN=RPLP2 PE=3 SV=1
Length = 115

Score = 63.5 bits (153), Expect = 3e-10
Identities = 31/50 (62%), Positives = 39/50 (78%)
Frame = +3

Query: 117 GGNCSPSAADVKNILGSLGSEADDDRIDLLLSELKGKDIVELIAAGKEKL 266
GGN SPSA D+K IL S+G EADDDR+D ++SEL GK+I ++IA G KL
Sbjct: 13 GGNTSPSAKDIKKILDSVGIEADDDRLDKVISELNGKNIEDVIAQGIGKL 62


tr_hit_id Q3HVP0
Definition tr|Q3HVP0|Q3HVP0_SOLTU 60s acidic ribosomal protein-like protein OS=Solanum tuberosum
Align length 50
Score (bit) 80.9
E-value 3.0e-14
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946755|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0013_K08, 5'
(430 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q3HVP0|Q3HVP0_SOLTU 60s acidic ribosomal protein-like protein... 81 3e-14
tr|A7PPG7|A7PPG7_VITVI Chromosome chr8 scaffold_23, whole genome... 79 9e-14
tr|A5AGQ2|A5AGQ2_VITVI Putative uncharacterized protein (Chromos... 79 1e-13
tr|Q8H2B9|Q8H2B9_PRUDU 60s acidic ribosomal protein OS=Prunus du... 78 2e-13
tr|A9PCM7|A9PCM7_POPTR Putative uncharacterized protein OS=Popul... 77 3e-13
tr|A8QJ72|A8QJ72_9ROSI 60S acidic ribosomal protein P2 OS=Juglan... 77 6e-13
tr|A7QBE6|A7QBE6_VITVI Chromosome chr13 scaffold_74, whole genom... 76 1e-12
tr|A9PAR7|A9PAR7_POPTR Putative uncharacterized protein OS=Popul... 75 1e-12
tr|A9P894|A9P894_POPTR Putative uncharacterized protein OS=Popul... 75 1e-12
tr|Q7XYD5|Q7XYD5_WHEAT Acidic ribosomal protein (Fragment) OS=Tr... 75 2e-12
tr|Q5YJR8|Q5YJR8_HYAOR 60S acidic ribosomal protein OS=Hyacinthu... 74 5e-12
tr|Q677G0|Q677G0_HYAOR Acidic ribosomal protein OS=Hyacinthus or... 72 1e-11
tr|Q65WT5|Q65WT5_ORYSJ Os05g0445500 protein OS=Oryza sativa subs... 72 1e-11
tr|Q38M67|Q38M67_SOLTU Putative uncharacterized protein OS=Solan... 72 1e-11
tr|B8AYR2|B8AYR2_ORYSI Putative uncharacterized protein OS=Oryza... 72 1e-11
tr|A5BNT4|A5BNT4_VITVI Putative uncharacterized protein OS=Vitis... 72 1e-11
tr|A3B4J3|A3B4J3_ORYSJ Putative uncharacterized protein OS=Oryza... 72 1e-11
tr|B2WCX9|B2WCX9_PYRTR 60S acidic ribosomal protein P2 OS=Pyreno... 72 1e-11
tr|A9NPB9|A9NPB9_PICSI Putative uncharacterized protein OS=Picea... 72 2e-11
tr|A9U0Z9|A9U0Z9_PHYPA Predicted protein OS=Physcomitrella paten... 71 3e-11
tr|A9NWC8|A9NWC8_PICSI Putative uncharacterized protein OS=Picea... 71 3e-11
tr|A9RPY2|A9RPY2_PHYPA Predicted protein OS=Physcomitrella paten... 70 4e-11
tr|A9RKJ0|A9RKJ0_PHYPA Predicted protein OS=Physcomitrella paten... 70 4e-11
tr|A7QN01|A7QN01_VITVI Chromosome undetermined scaffold_129, who... 70 4e-11
tr|B8P0N4|B8P0N4_9APHY 60S acidic ribosomal protein P2 OS=Postia... 70 5e-11
tr|B7FMX7|B7FMX7_MEDTR Putative uncharacterized protein OS=Medic... 70 7e-11
tr|B6DRE4|B6DRE4_9LAMI 60S acidic ribosomal protein P2-like prot... 69 9e-11
tr|A9S6G5|A9S6G5_PHYPA Predicted protein OS=Physcomitrella paten... 69 9e-11
tr|Q2H653|Q2H653_CHAGB Putative uncharacterized protein OS=Chaet... 69 9e-11
tr|A9RV72|A9RV72_PHYPA Predicted protein OS=Physcomitrella paten... 68 2e-10

>tr|Q3HVP0|Q3HVP0_SOLTU 60s acidic ribosomal protein-like protein
OS=Solanum tuberosum PE=4 SV=1
Length = 115

Score = 80.9 bits (198), Expect = 3e-14
Identities = 39/50 (78%), Positives = 46/50 (92%)
Frame = +3

Query: 117 GGNCSPSAADVKNILGSLGSEADDDRIDLLLSELKGKDIVELIAAGKEKL 266
GGN SPSAAD+K IL S+G+EADDDRI+LLLS++KGKDI ELIAAG+EKL
Sbjct: 13 GGNTSPSAADLKKILASVGAEADDDRIELLLSQVKGKDITELIAAGREKL 62


>tr|A7PPG7|A7PPG7_VITVI Chromosome chr8 scaffold_23, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00021645001
PE=4 SV=1
Length = 114

Score = 79.3 bits (194), Expect = 9e-14
Identities = 38/50 (76%), Positives = 46/50 (92%)
Frame = +3

Query: 117 GGNCSPSAADVKNILGSLGSEADDDRIDLLLSELKGKDIVELIAAGKEKL 266
GGN PSA D+K+ILGS+G+EADDDRI+LLLSE+KGKDI ELIA+G+EKL
Sbjct: 13 GGNTCPSANDLKDILGSVGAEADDDRIELLLSEVKGKDITELIASGREKL 62


>tr|A5AGQ2|A5AGQ2_VITVI Putative uncharacterized protein (Chromosome
chr6 scaffold_25, whole genome shotgun sequence)
OS=Vitis vinifera GN=GSVIVT00022049001 PE=4 SV=1
Length = 113

Score = 78.6 bits (192), Expect = 1e-13
Identities = 37/50 (74%), Positives = 46/50 (92%)
Frame = +3

Query: 117 GGNCSPSAADVKNILGSLGSEADDDRIDLLLSELKGKDIVELIAAGKEKL 266
GGN PSA D+K+ILGS+G+EADDDRI+LLL+E+KGKDI ELIA+G+EKL
Sbjct: 13 GGNTCPSAEDLKDILGSVGAEADDDRIELLLAEVKGKDITELIASGREKL 62


>tr|Q8H2B9|Q8H2B9_PRUDU 60s acidic ribosomal protein OS=Prunus
dulcis GN=AL60SRP PE=4 SV=1
Length = 113

Score = 78.2 bits (191), Expect = 2e-13
Identities = 37/50 (74%), Positives = 45/50 (90%)
Frame = +3

Query: 117 GGNCSPSAADVKNILGSLGSEADDDRIDLLLSELKGKDIVELIAAGKEKL 266
GGN +PSA D+K+ILGS+G+E DDDRI LLLSE+KGKDI ELIA+G+EKL
Sbjct: 13 GGNTTPSAEDLKDILGSVGAETDDDRIQLLLSEVKGKDITELIASGREKL 62


>tr|A9PCM7|A9PCM7_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=4 SV=1
Length = 113

Score = 77.4 bits (189), Expect = 3e-13
Identities = 36/50 (72%), Positives = 45/50 (90%)
Frame = +3

Query: 117 GGNCSPSAADVKNILGSLGSEADDDRIDLLLSELKGKDIVELIAAGKEKL 266
GGN P+A D+KNILGS+G++ADDDRI+LLLS +KGKDI ELIA+G+EKL
Sbjct: 13 GGNTCPTAEDLKNILGSVGADADDDRIELLLSSVKGKDITELIASGREKL 62


>tr|A8QJ72|A8QJ72_9ROSI 60S acidic ribosomal protein P2 OS=Juglans
regia PE=4 SV=1
Length = 113

Score = 76.6 bits (187), Expect = 6e-13
Identities = 36/50 (72%), Positives = 45/50 (90%)
Frame = +3

Query: 117 GGNCSPSAADVKNILGSLGSEADDDRIDLLLSELKGKDIVELIAAGKEKL 266
GGN +P D+K+ILGS+G+EADDD+I+LLLSE+KGKDI ELIAAG+EKL
Sbjct: 13 GGNTTPCTDDLKHILGSVGAEADDDKIELLLSEVKGKDITELIAAGREKL 62


>tr|A7QBE6|A7QBE6_VITVI Chromosome chr13 scaffold_74, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00034930001
PE=4 SV=1
Length = 111

Score = 75.9 bits (185), Expect = 1e-12
Identities = 37/50 (74%), Positives = 45/50 (90%)
Frame = +3

Query: 117 GGNCSPSAADVKNILGSLGSEADDDRIDLLLSELKGKDIVELIAAGKEKL 266
GGN SP A D+K+ILGS+G+EADDD I+LLLSE+KGKDI ELIA+G+EKL
Sbjct: 13 GGNGSPCADDLKSILGSVGAEADDDGIELLLSEVKGKDITELIASGREKL 62


>tr|A9PAR7|A9PAR7_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=4 SV=1
Length = 114

Score = 75.5 bits (184), Expect = 1e-12
Identities = 35/50 (70%), Positives = 45/50 (90%)
Frame = +3

Query: 117 GGNCSPSAADVKNILGSLGSEADDDRIDLLLSELKGKDIVELIAAGKEKL 266
GGN P+A D+K+ILGS+G++ADDDRI+LLLS +KGKDI ELIA+G+EKL
Sbjct: 13 GGNTCPTAEDLKHILGSVGADADDDRIELLLSSVKGKDITELIASGREKL 62


>tr|A9P894|A9P894_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=4 SV=1
Length = 114

Score = 75.5 bits (184), Expect = 1e-12
Identities = 35/50 (70%), Positives = 45/50 (90%)
Frame = +3

Query: 117 GGNCSPSAADVKNILGSLGSEADDDRIDLLLSELKGKDIVELIAAGKEKL 266
GGN P+A D+K+ILGS+G++ADDDRI+LLLS +KGKDI ELIA+G+EKL
Sbjct: 13 GGNTCPTAEDLKHILGSVGADADDDRIELLLSSVKGKDITELIASGREKL 62


>tr|Q7XYD5|Q7XYD5_WHEAT Acidic ribosomal protein (Fragment)
OS=Triticum aestivum PE=2 SV=1
Length = 138

Score = 74.7 bits (182), Expect = 2e-12
Identities = 34/49 (69%), Positives = 45/49 (91%)
Frame = +3

Query: 117 GGNCSPSAADVKNILGSLGSEADDDRIDLLLSELKGKDIVELIAAGKEK 263
GGN SPSAADVKNIL S+G+EAD+++++ LL+ELKGKDI E+IA+G+EK
Sbjct: 38 GGNSSPSAADVKNILDSVGAEADEEKLEFLLAELKGKDITEVIASGREK 86